prot_P-littoralis_Contig1260.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1260.6.1
Unique Nameprot_P-littoralis_Contig1260.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length709
Homology
BLAST of mRNA_P-littoralis_Contig1260.6.1 vs. uniprot
Match: A0A6H5LCV9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCV9_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.890e-13
Identity = 148/480 (30.83%), Postives = 167/480 (34.79%), Query Frame = 0
Query:  115 EEMIDTSNSSSDFTGPQRVRVGNSNTAASSISLSFWSLPASTPDSNTSRSRLGSQTMSRARPGQRQQRTGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKSTIHESADSAPAVDKLKRARTNAEPATTRTTAVTGMMAASDARLEESRQKWSRSNGGGSRIPDEIFTEDGASDSSXXXXXXXXXXXXXXXXXXXXXXXGPSKSXXXXXXXAANPRSSPC-PFGTDISHILSWKPAPRPNATPTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAAMDASXXXXXXXXXXXXXXXXXXSQR---AGFVTGEEPKVGAXXXXXXXXXXRTG------KRAAPTRSATAPTATRPRISASLEALRVRVVKKAD----------------GXXXXXXXXXXSFDDVDLKLEAYDAEMRRRSADAAAAPR 568
            EE+ D SNSS DFTGPQRVR+ NSN+  + ISLSFWSLPASTPDS +   RL S+T+           T  TA                                                  +   + +    KRAR    P    TT  T   AA+ A       KWS               +  A+                            +K+        A   S P  PFGTDISHILSWKPAPR NA  +                                                                 P AA   S                    R   AG V GEE  VGA                    R  PT   TA  + RP IS SLEALRVRVVKK                   XXXXXXXXXXSF+ VDLKLEAYDAE+RRRSADAA APR
Sbjct:   98 EEIADVSNSSGDFTGPQRVRI-NSNSVPADISLSFWSLPASTPDSKSGGGRLTSKTV-----------TKGTA--------------------------------------------------AGGKSASASTRKRARGGGTPQAVETTVTT---AATRAEARHQASKWSSGATAXXXXXXXXXXDPSAA----------------------------AKTDRAAAAATAKVDSVPSNPFGTDISHILSWKPAPRQNAAGSDGTGGSPTTGSASTNTTPEAGSKQEQHSSTGGPSTQQ----------------------------PTAAATGSFGRSSASSSFMTVASSGDGSRGRTAGGV-GEEAGVGAAGRPRTRAPPLKSFAKWPPARTTPTEMGTATVSARPAIS-SLEALRVRVVKKVGEKSDDXXXXXXXXXXXXXXXXXXXXXXSFE-VDLKLEAYDAEVRRRSADAAVAPR 453          
BLAST of mRNA_P-littoralis_Contig1260.6.1 vs. uniprot
Match: D7G1H4_ECTSI (Possibly a dual-specificity PK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H4_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 3.240e-5
Identity = 58/93 (62.37%), Postives = 62/93 (66.67%), Query Frame = 0
Query:  492 RTGKRAAPTRSATAPTATRPRISASLEALRVRVVKKA-----DGXXXXXXXXXX-----------SFDDVDLKLEAYDAEMRRRSADAAAAPR 568
            R   RA P +S TA  + RP IS SLEALRVRVVKK      DG  XXXXXXXX           SF+ VDLKLEAYDAE+RRRSADAAAAPR
Sbjct:   30 RPSTRAPPVKSGTATASARPAIS-SLEALRVRVVKKVGEKSDDGGDXXXXXXXXXXXXXXXXXGDSFE-VDLKLEAYDAEVRRRSADAAAAPR 120          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1260.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LCV9_9PHAE3.890e-1330.83Protein kinase domain-containing protein n=1 Tax=E... [more]
D7G1H4_ECTSI3.240e-562.37Possibly a dual-specificity PK n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..546
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 660..683
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 417..435
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 625..639
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 448..462
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..709
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1260contigP-littoralis_Contig1260:14592..18280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1260.6.1mRNA_P-littoralis_Contig1260.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1260 14426..18280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1260.6.1 ID=prot_P-littoralis_Contig1260.6.1|Name=mRNA_P-littoralis_Contig1260.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=709bp
MDNNSNSSFGMSSSVAGKENARGNPTRPYTTAKKLGETQQRQQQQQQQTS
VAVPKTPKPRVDGTIGAAASTRVRRSGLSLREDGNGGAPSSSLRARAATA
ATALCSSSSKSKGEEEMIDTSNSSSDFTGPQRVRVGNSNTAASSISLSFW
SLPASTPDSNTSRSRLGSQTMSRARPGQRQQRTGATAAAGAGAASTPSHN
NHHRPSGAASREPLTIVRAGGGSSSSSSSSRKSTIHESADSAPAVDKLKR
ARTNAEPATTRTTAVTGMMAASDARLEESRQKWSRSNGGGSRIPDEIFTE
DGASDSSGAATASSTEPPLPTAAAAAAAVVGPSKSPAAATSSAANPRSSP
CPFGTDISHILSWKPAPRPNATPTSSAAAAASFNRVVSTGEEEDARGGSG
SAAALSRQEHQRHQPQEQRSSSSSSSISGNAAAMKSNQKPLAAMDASVGA
SSASSAVSSGDDPPRSQRAGFVTGEEPKVGAAAAAAAAAAARTGKRAAPT
RSATAPTATRPRISASLEALRVRVVKKADGDDDDDDDDDDSFDDVDLKLE
AYDAEMRRRSADAAAAPRAAALGAAARRTPVTPVTAGAAAALPSSSRLGA
PTAAAAGGTIAMSGAGAPSKGGVSGGVGSASSSSSPSAREGFAKKAPVAA
AEEVGVPSTAYQLRKNSSSSSGSSGSGNKGENGSSEARWDGGGRPLWSGA
GVSSGRSGG
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