prot_P-littoralis_Contig126.97.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig126.97.1
Unique Nameprot_P-littoralis_Contig126.97.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length86
Homology
BLAST of mRNA_P-littoralis_Contig126.97.1 vs. uniprot
Match: A0A0R6M4Q0_UNDPI (30S ribosomal protein S14, chloroplastic n=31 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M4Q0_UNDPI)

HSP 1 Score: 150 bits (380), Expect = 8.930e-46
Identity = 73/84 (86.90%), Postives = 78/84 (92.86%), Query Frame = 0
Query:    3 RERLVLKYSQKRKSFLLEFKTADTFSAQMELHKKIEKQPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVR 86
            RERLV+KY +KRKS LLEFK A+TFS QME+HKKIEK PRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHM+REM HNCLLPGVR
Sbjct:   13 RERLVIKYREKRKSLLLEFKKANTFSDQMEVHKKIEKLPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMVREMGHNCLLPGVR 96          
BLAST of mRNA_P-littoralis_Contig126.97.1 vs. uniprot
Match: A0A1I9LVJ7_9PHAE (30S ribosomal protein S14, chloroplastic n=5 Tax=Ectocarpales TaxID=2877 RepID=A0A1I9LVJ7_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 2.460e-43
Identity = 72/84 (85.71%), Postives = 78/84 (92.86%), Query Frame = 0
Query:    3 RERLVLKYSQKRKSFLLEFKTADTFSAQMELHKKIEKQPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVR 86
            RE+LVLKYSQKR++ LLEFK A+TFS QM LHKKIEK PRNSSRIRLRNRCWRTGRSRGVY+DFGLCRHMIREMAHN +LPGVR
Sbjct:   13 REKLVLKYSQKRETLLLEFKKANTFSDQMGLHKKIEKLPRNSSRIRLRNRCWRTGRSRGVYKDFGLCRHMIREMAHNGILPGVR 96          
BLAST of mRNA_P-littoralis_Contig126.97.1 vs. uniprot
Match: A0A2R4QPV6_9PHAE (30S ribosomal protein S14 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPV6_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 4.960e-43
Identity = 71/84 (84.52%), Postives = 74/84 (88.10%), Query Frame = 0
Query:    3 RERLVLKYSQKRKSFLLEFKTADTFSAQMELHKKIEKQPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVR 86
            RE+LVLKY +KR   L EFKTAD F  QME+ KKIEK PRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVR
Sbjct:   13 REKLVLKYREKRDFLLFEFKTADNFLQQMEIRKKIEKLPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVR 96          
BLAST of mRNA_P-littoralis_Contig126.97.1 vs. uniprot
Match: A0A8F0FAM9_9PHAE (Ribosomal protein S14 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAM9_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 4.080e-42
Identity = 67/84 (79.76%), Postives = 77/84 (91.67%), Query Frame = 0
Query:    3 RERLVLKYSQKRKSFLLEFKTADTFSAQMELHKKIEKQPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVR 86
            RE+LV KYS+KRK+ L++FK A+ F  QME+HKKIEK PRNS++IRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNC+LPGVR
Sbjct:   13 REKLVEKYSEKRKALLIDFKKANNFVDQMEIHKKIEKLPRNSAKIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCILPGVR 96          
BLAST of mRNA_P-littoralis_Contig126.97.1 vs. uniprot
Match: A0A8F0F7A7_9PHAE (Ribosomal protein S14 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7A7_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 6.770e-41
Identity = 66/84 (78.57%), Postives = 75/84 (89.29%), Query Frame = 0
Query:    3 RERLVLKYSQKRKSFLLEFKTADTFSAQMELHKKIEKQPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVR 86
            R + V KYS++R+  LLEFK ADTFS QME+HKKIE+ PRNSS IRLRNRCWRTGRSRG+YRDFGLCRHMIREMAH+C+LPGVR
Sbjct:   13 RTKSVKKYSERRRLLLLEFKKADTFSKQMEIHKKIEQLPRNSSMIRLRNRCWRTGRSRGIYRDFGLCRHMIREMAHDCILPGVR 96          
BLAST of mRNA_P-littoralis_Contig126.97.1 vs. uniprot
Match: A0A8E5XRG5_9PHAE (30S ribosomal protein S14, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRG5_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 8.840e-37
Identity = 63/84 (75.00%), Postives = 71/84 (84.52%), Query Frame = 0
Query:    3 RERLVLKYSQKRKSFLLEFKTADTFSAQMELHKKIEKQPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVR 86
            R RLV KY +KR+S L EFK A+TFS QME H+KIE+ P+NSS+IRLRNRCWRTGRSRGVYRDFGLCRHMIREM H   LPG+R
Sbjct:   13 RIRLVSKYHEKRRSLLDEFKRANTFSIQMETHRKIERLPKNSSKIRLRNRCWRTGRSRGVYRDFGLCRHMIREMGHTGTLPGIR 96          
BLAST of mRNA_P-littoralis_Contig126.97.1 vs. uniprot
Match: A0A1L2F1U9_9PHAE (Ribosomal protein S14 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1U9_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 1.260e-36
Identity = 58/84 (69.05%), Postives = 74/84 (88.10%), Query Frame = 0
Query:    3 RERLVLKYSQKRKSFLLEFKTADTFSAQMELHKKIEKQPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVR 86
            RE+LV +Y +KR+  LLEFK  + F  QM+++++I+K PRNSS+IRL+NRCWRTGR+RGVYRDFGLCRHMIREMAHNC+LPGV+
Sbjct:   13 REKLVFRYIEKRQLLLLEFKKTNNFVEQMQINRRIQKLPRNSSKIRLKNRCWRTGRTRGVYRDFGLCRHMIREMAHNCILPGVK 96          
BLAST of mRNA_P-littoralis_Contig126.97.1 vs. uniprot
Match: A0A7S6U9W6_9STRA (30S ribosomal protein S14, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9W6_9STRA)

HSP 1 Score: 127 bits (318), Expect = 2.530e-36
Identity = 62/84 (73.81%), Postives = 69/84 (82.14%), Query Frame = 0
Query:    3 RERLVLKYSQKRKSFLLEFKTADTFSAQMELHKKIEKQPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVR 86
            R+ LV+KY +KRK+FL  F   + F  +M LHKKIEK PRNSSRIRLRNRCWRTGRSRG YRDFGLCRHMIREM HN LLPG+R
Sbjct:   13 RQHLVIKYKKKRKTFLALFNKENNFETKMLLHKKIEKLPRNSSRIRLRNRCWRTGRSRGTYRDFGLCRHMIREMGHNGLLPGLR 96          
BLAST of mRNA_P-littoralis_Contig126.97.1 vs. uniprot
Match: A0A8E5BHX8_9PHAE (Ribosomal protein S14 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BHX8_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.710e-34
Identity = 53/84 (63.10%), Postives = 74/84 (88.10%), Query Frame = 0
Query:    3 RERLVLKYSQKRKSFLLEFKTADTFSAQMELHKKIEKQPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVR 86
            R+++++KYS +RK+ L++ K A+TF  Q+++HK IEK PRN++++R+RNRCW TGRSRGVYRDFGLCRHMIR MAHNC+LPG++
Sbjct:   13 RKKIIIKYSVRRKNLLIKLKKANTFLEQVQIHKIIEKLPRNTAQVRVRNRCWITGRSRGVYRDFGLCRHMIRNMAHNCILPGIK 96          
BLAST of mRNA_P-littoralis_Contig126.97.1 vs. uniprot
Match: A0A141BSF2_9PHAE (30S ribosomal protein S14, chloroplastic n=13 Tax=Sargassum TaxID=3015 RepID=A0A141BSF2_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 4.890e-34
Identity = 57/84 (67.86%), Postives = 71/84 (84.52%), Query Frame = 0
Query:    3 RERLVLKYSQKRKSFLLEFKTADTFSAQMELHKKIEKQPRNSSRIRLRNRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVR 86
            RE+LV +Y ++R+  LLE K    F  QM++++KI+K PRNSS+IRLRNRCWRTGR+RGVYRDFGLCRHMIREMA NC+LPGV+
Sbjct:   13 REKLVSRYMERRQFLLLELKKTTNFVQQMQINRKIQKLPRNSSKIRLRNRCWRTGRTRGVYRDFGLCRHMIREMALNCILPGVK 96          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig126.97.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0R6M4Q0_UNDPI8.930e-4686.9030S ribosomal protein S14, chloroplastic n=31 Tax=... [more]
A0A1I9LVJ7_9PHAE2.460e-4385.7130S ribosomal protein S14, chloroplastic n=5 Tax=E... [more]
A0A2R4QPV6_9PHAE4.960e-4384.5230S ribosomal protein S14 n=3 Tax=Fucaceae TaxID=3... [more]
A0A8F0FAM9_9PHAE4.080e-4279.76Ribosomal protein S14 n=1 Tax=Desmarestia aculeata... [more]
A0A8F0F7A7_9PHAE6.770e-4178.57Ribosomal protein S14 n=1 Tax=Protohalopteris sp. ... [more]
A0A8E5XRG5_9PHAE8.840e-3775.0030S ribosomal protein S14, chloroplastic n=1 Tax=I... [more]
A0A1L2F1U9_9PHAE1.260e-3669.05Ribosomal protein S14 n=1 Tax=Coccophora langsdorf... [more]
A0A7S6U9W6_9STRA2.530e-3673.8130S ribosomal protein S14, chloroplastic n=1 Tax=S... [more]
A0A8E5BHX8_9PHAE1.710e-3463.10Ribosomal protein S14 n=1 Tax=Phaeophyceae sp. Tax... [more]
A0A141BSF2_9PHAE4.890e-3467.8630S ribosomal protein S14, chloroplastic n=13 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001209Ribosomal protein S14PFAMPF00253Ribosomal_S14coord: 36..86
e-value: 2.0E-21
score: 75.5
IPR001209Ribosomal protein S14PANTHERPTHR1983630S RIBOSOMAL PROTEIN S14coord: 3..85
NoneNo IPR availableGENE3D1.10.287.1480coord: 1..80
e-value: 2.4E-23
score: 84.2
NoneNo IPR availablePANTHERPTHR19836:SF1928S RIBOSOMAL PROTEIN S14, MITOCHONDRIALcoord: 3..85
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 2..86
IPR018271Ribosomal protein S14, conserved sitePROSITEPS00527RIBOSOMAL_S14coord: 52..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig126contigP-littoralis_Contig126:453786..454043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig126.97.1mRNA_P-littoralis_Contig126.97.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig126 453786..454043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig126.97.1 ID=prot_P-littoralis_Contig126.97.1|Name=mRNA_P-littoralis_Contig126.97.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=86bp
MLRERLVLKYSQKRKSFLLEFKTADTFSAQMELHKKIEKQPRNSSRIRLR
NRCWRTGRSRGVYRDFGLCRHMIREMAHNCLLPGVR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001209Ribosomal_S14
IPR018271Ribosomal_S14_CS