mRNA_P-littoralis_Contig126.95.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig126.95.2 vs. uniprot
Match: D8LDU6_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU6_ECTSI) HSP 1 Score: 387 bits (993), Expect = 3.030e-119 Identity = 287/680 (42.21%), Postives = 348/680 (51.18%), Query Frame = 1
Query: 94 MKPSTTASVLLGLLSAPALAMPSKASQQ-IEVAEGGVRFKVTRFGDGRTTPYRIYFWDKVLTGSSYRFNKDGDVVYFKAGSKVYYDRQEMKDGSVTFMSK-SEAKHEGGDSKADDSSSDDEEFTTFDCTQCTTALSAVCDFGLPAFCDKLDPHCLHRDGYYSVST------LCNNYEGACATSVAACEQVCADELGISMCSNGIEGVESSNGKACCVAECGACGGEGCSGFGADAGLGADDCCATEIADDGEACSVTMKAPCFINEDSSDDGSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMC-SNGIDGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEIADDGKACSVTMKAPCFIYEGDSEDDSSVEDSSSDN---------GPSTC-SNGIYGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEITEDGKACLVAMEAPCFIDEDSS---------------------------------------------------------------------------------DDXXXXXXXXXXXXXXXXXXX----------DDDGA-MCIKESLSDADLVSLEIYDNDMYVEPDCVDDSITELVVGCNFMGLGQSCRGCYMTCEGALKYIEDNGDEIKSRGEEIIINFCPDCGVT 1800
MK S S LLGLL + M A QQ IE+ EGG FK++ F DGR TPYR+YFWD LTGSSYRF DGDV YFKAG + Y DR++ +DGS+ F S SE + + K + +D F T+ C+ CTT L AVC GLP FC +D CL DG S S+ + S+G+ G+ESSN K CC CG CGG GCS FG GLG CCA+ I DDGE+C+VT APCFI DS DD XXXXXXXXXXXXXXXXXXXXXXXXX C S+G+ G+ESSN + CC CG CGG GCS FG GLG CC + I DDG++C+VT APCFI DS+++SS G +TC S+G+ G+ESSN +ACC CGACGG GCS FG GLGA +CC +I +G++C APC+ID D DD DD GA C +SL+DAD L +YDNDMY+E DCV+DS T L +GCN+MGLGQ CRGC++TC GAL YI+D + I GE+ +INFCP V+
Sbjct: 1 MKSSMIVSALLGLLVPGSATMAETAKQQQIEIPEGGYTFKISHFDDGRATPYRVYFWDTFLTGSSYRFTLDGDVRYFKAGREQYKDREDKEDGSIKFTSTPSEPRKDLN--KLEPKPTD---FPTYSCSDCTTTLQAVCHSGLPKFCSTIDRSCLGSDGTLSESSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATCASHGVVGIESSNKKVCCDLRCGTCGGVGCSKFGEAYGLGESSCCASTITDDGESCAVTGMAPCFI--DSDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGTATCASHGVVGIESSNKKVCCDLRCGTCGGVGCSKFGEAYGLGESSCCASTITDDGESCAVTGMAPCFI---DSDNESSXXXXXXXXXXXXXXXXXGSATCASHGVVGIESSNQKACCDVRCGACGGVGCSKFGEAYGLGAYECCSNDIVREGESCAATGMAPCYIDSDDESXXXXXXXXXXXXXXXXXXXXXXXXGEGTAMCASYGVVGIESSNQKACCDVRCGACGGVGCSKFGEAYGLDASYCCSNEIVDDGESCSATGMAPCFMESDDDSIEDIVAPASDDGGAPSCSMDSLNDADQQQLALYDNDMYLEDDCVNDS-TPLPLGCNYMGLGQECRGCFLTCAGALTYIDDKAEHILEYGEDAVINFCPQSEVS 669
BLAST of mRNA_P-littoralis_Contig126.95.2 vs. uniprot
Match: A0A6H5KWI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI6_9PHAE) HSP 1 Score: 379 bits (972), Expect = 1.630e-117 Identity = 258/621 (41.55%), Postives = 329/621 (52.98%), Query Frame = 1
Query: 94 MKPSTTASVLLGLLSAPALAMPSKASQQ-IEVAEGGVRFKVTRFGDGRTTPYRIYFWDKVLTGSSYRFNKDGDVVYFKAGSKVYYDRQEMKDGSVTFMSK-SEAKHEGGDSKADDSSSDDEEFTTF-DCTQCTTALSAVCDFGLPAFCDKLDPHCLHRDGYYSVSTLCNNYEGACATSVAACEQVCADELGI-------------------------------SMCSNGIEGVESSNGKACCVAECGACGGEGCSGFGADAGLGADDCCATEIADDGEACSVTMKAPCFINEDSSDDGSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSNGIDGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEIADDGKACSVTMKAPCFIYEGDSEDDSSVEDSS-----------------SDNGPSTCSN-GIYGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEITEDGKACLVAMEAPCFIDEDSSDDXXXXXXXXXXXXXXXXXXXDDDGAMCIKESLSDADLVSLEIYDNDMYVEPDCVDDSITELVVGCNFMGLGQSCRGCYMTCEGALKYIEDNGDEIKSRGEEIIINFCPDCGVT 1800
M+ T S LLGLL + M A QQ I++ EGG FK++ F DGR TPYR+YFWD LTGSSYRF DGDV YFKAG + Y DR++ +DGS+ F S SE + + S+ + +F T+ C+ CT L VC GLP FC +D CL RDG SV LC YE ACA++ + C + S+G+ G+ESSN K CC CG CGG GCS FG + GLG CC + I DDGE+C+ T APC+I DS DD XXXXXXXXXXXXXX S G+ G+ESSN +ACC CGACGG GCS FG GLGA +CC +I G++C+ T APC+I DS+D+ E S G + C++ G+ G+ESSN +ACC CG CGG GCS FG GL A CC EI +DG++C APCFI+ + C ++SL+D D L +Y+NDMY+E DCV+DS T L +GCN+MGLGQ CRGC++ AL ++ +GE+ +INFCP V+
Sbjct: 1 MRSFTIVSALLGLLVPGSATMAKTAKQQQIQIPEGGHTFKISHFDDGRATPYRVYFWDTFLTGSSYRFTLDGDVRYFKAGREQYKDREDKEDGSIKFTSTPSEPRKDLNKSEPKPT-----DFPTYRSCSDCTATLQVVCRSGLPKFCSTVDRSCLGRDGALSVGILCGKYERACASANSVCSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPTCASHGVVGIESSNKKVCCDVRCGTCGGVGCSKFGEEYGLGESYCCTSTITDDGESCADTGMAPCYI--DSDDDXXX-----------XXXXXXXXXXXXXXGEGSTTCASYGVVGIESSNQKACCDVRCGACGGVGCSKFGEAYGLGAYECCSNDIVKQGESCAATGMAPCYI---DSDDEWDYESKDXXXXXXXXXXXXXXXXXSGEGTAMCASYGVVGIESSNQKACCDVRCGTCGGVGCSKFGEAYGLDASYCCSNEIVDDGESCSATGMAPCFIESGGAQS-------------------------CSRDSLNDVDQQQLNLYENDMYLEDDCVNDS-TPLPLGCNYMGLGQECRGCFL----ALAHV---------KGEDAVINFCPQSEVS 561
BLAST of mRNA_P-littoralis_Contig126.95.2 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI) HSP 1 Score: 198 bits (504), Expect = 2.430e-48 Identity = 117/262 (44.66%), Postives = 154/262 (58.78%), Query Frame = 1
Query: 664 MCSNGIEGVESSNGKACCVAECGACGGEGCSGFGADAGLGADDCCATEIADDGEACSVTMKAPCFINEDSSDDGSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSNGIDGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEIADDGKACSVTMKAPCFIYEGDSEDDSSVEDSSSDNGPSTCSNGIYGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEITEDGKACLVAMEAPCFIDE 1449
+CSNGI G+++ N ACC+AECG CGG GC+ +G GLG D+CC +EI D GE CSVTM+APC +++ +CSNGI G+++ N ACC+AECG CGG GC+ +G GLG D+CC +EI D G+ CSVTM+APC + DD CSNGI G+++ N ACC+AECG CGG GC+ G GLGAD+CC++EI + G+ C V MEAPC +D+
Sbjct: 2691 VCSNGIPGIQTGN--ACCLAECGTCGGRGCAEYGG--GLGEDNCCQSEIEDFGELCSVTMEAPCVVDD---------------------------------------VCSNGIPGIQTGN--ACCLAECGTCGGRGCAEYGG--GLGEDNCCQSEIEDFGELCSVTMEAPCVV------DD-------------VCSNGIPGIQTGN--ACCLAECGGCGGTGCAQLGG--GLGADNCCMSEIEDFGELCSVTMEAPCVVDD 2882
BLAST of mRNA_P-littoralis_Contig126.95.2 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE) HSP 1 Score: 189 bits (479), Expect = 2.500e-45 Identity = 140/285 (49.12%), Postives = 183/285 (64.21%), Query Frame = 1
Query: 664 MCSNGIEGVESSNGKACCVAECGACGGEGCSGFGADAGLGADDCCATEIADDGEACSVTMKAPCFINEDSSDDGSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSNGIDGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEIADDGKACSVTMKAPCFIYEGDSEDDSSVEDSSSDNGP-------------------STCSNGIYGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEITEDGKACLVAMEAPCFIDEDSSD 1461
+CSNG G++S N ACC+AECG CGG C FG GLGA++CC ++I D GE CS+ ++APC+++E + + XXXXXXXXXXXXXXXXXXXXXXXXXX +CSNGI G++S N ACC+AECG CGG C FG GLGA++CC ++I D G+ CS+ ++APC++ E E TCSNG+ G++S N ACC+AECGACGG C FG GLGAD+CC ++I E G+ C +A+EAPC++D+ SD
Sbjct: 542 LCSNGFPGIQSGN--ACCLAECGGCGGSDCDQFGD--GLGAENCCESDIVDYGELCSIALEAPCYLDEPTPEPXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXEPTDLCSNGIPGIQSGN--ACCLAECGGCGGSDCDQFGD--GLGAENCCESDIVDYGELCSIALEAPCYLDEPTPEPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTDTCSNGMPGIQSGN--ACCLAECGACGGSDCDAFGG--GLGADNCCESDIVEHGELCSIALEAPCYLDDVCSD 813
BLAST of mRNA_P-littoralis_Contig126.95.2 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE) HSP 1 Score: 147 bits (372), Expect = 2.820e-35 Identity = 84/187 (44.92%), Postives = 117/187 (62.57%), Query Frame = 1
Query: 103 STTASVLLGLLSAPALAMPSKASQQ-IEVAEGGVRFKVTRFGDGRTTPYRIYFWDKVLTGSSYRFNKDGDVVYFKAGSKVYYDRQEMKDGSVTFMSK-SEAKHEGGDSKADDSSSDDEEFTTFD---CTQCTTALSAVCDFGLPAFCDKLDPHCLHRDGYYSVSTLCNNYEGACATSVAACEQVCAD 648
+TT VLLG LS+ LA ++A+Q+ IE+ GG FK++ F DGRTTPYR++F D+ LTGSSYR + DG V YFKAG+++Y+DR D S+TF K SE++ G K DD +F++ + CT+CT A++A C GLP FC +D L DG S+ LC+NY+ C +C +C D
Sbjct: 5 TTTVGVLLGQLSS--LATVAQAAQKKIEIPAGGYTFKLSLFDDGRTTPYRVFFADEYLTGSSYRLSADGHVQYFKAGAELYFDRMVQDDNSITFSKKPSESRKHG---KGRPEPHDDYDFSSSEANFCTECTEAITATCYSGLPEFCTMVDRSILGNDGLQSMRALCHNYKEVCTIVEDSCHYLCGD 186
BLAST of mRNA_P-littoralis_Contig126.95.2 vs. uniprot
Match: D7G8L8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L8_ECTSI) HSP 1 Score: 137 bits (345), Expect = 6.620e-33 Identity = 95/260 (36.54%), Postives = 117/260 (45.00%), Query Frame = 1
Query: 661 SMCSNGIEGVESSNGKACCVAECGACGGEGCSGFGADAGLGADDCCATEIADDGEACSVTMKAPCFINEDSSDDGSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSNGIDGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEIADDGKACSVTMKAPCFIYEGDSEDDSSVEDSSSDNGPSTCSNGIYGVESSNGQACCV-AECGACGGEGCSGFGADAGLGADDCCVTEITEDGKACLVAMEAPC 1437
S C++GIEG++ NG CC CG CGGEGC+G GAD GLG++ CC + C VT KAPC S +G C+NGI+G++ NG CC +CG CGGEGCSG GAD GLG++ CC + C VT KAPC IYG V A CGGEGCS GA +GLG+ CC + G+ C + EAPC
Sbjct: 22 STCNDGIEGIDG-NGVVCCPRHCGQCGGEGCTGSGADFGLGSESCCGGGVKSANNYCDVTGKAPCIYG--SPPEGE---------------------------------CNNGIEGIDG-NGVVCCPLDCGQCGGEGCSGSGADFGLGSESCCGGGVKSANNYCDVTGKAPC----------------------------IYGSPPEEALLTTVNARTQQCGGEGCSSAGAASGLGSGSCCGHGVKSSGRYCDITEEAPC 216
BLAST of mRNA_P-littoralis_Contig126.95.2 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE) HSP 1 Score: 135 bits (341), Expect = 6.730e-30 Identity = 97/262 (37.02%), Postives = 124/262 (47.33%), Query Frame = 1
Query: 664 MCSNGIEGVESSNGKACCVAECGACGGEGCSGFGADAGLGADDCCATEIADDGEACSVTMKAPCFINEDSSDDGSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCSNGIDGVESSNGQACCVAECG-ACGGEGCSGFGADAGLGADDCCVTEIADDGKACSVTMKAPCFIYEGDSEDDSSVEDSSSDNGPSTCSNGIYGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEITEDGKACLVAMEAPCFID 1446
+CSNG+EG++S++ CCV C CGG C+ + L + DCCATEI + G C V+M APC I ++ + S +C NG GV + CC ECG +CGGEGC G+ G+ A CC + I + G CS T+ APC + G +E D+S TCSNGI G+E CC A CG CGG GC GL DCC EI C V EAPC +D
Sbjct: 29 VCSNGLEGIQSTSLDVCCVEGCEVCGGVDCTPANTSS-LTSADCCATEIVESGTFCDVSMAAPCIITTAAAANDS--------------------------------VCENGQTGVPDPDTDVCCPLECGDSCGGEGC---GSIPGVNATQCCSSLIIESGAVCSDTVSAPCVV--GAAEADNST----------TCSNGIVGIEDPVNLICCDAACGLCGGPGCGNVTGLTGL---DCCSEEIAVVNDLCSVTNEAPCVMD 239
BLAST of mRNA_P-littoralis_Contig126.95.2 vs. uniprot
Match: D7FHN7_ECTSI (von Willebrand A domain containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN7_ECTSI) HSP 1 Score: 122 bits (307), Expect = 2.750e-27 Identity = 74/185 (40.00%), Postives = 96/185 (51.89%), Query Frame = 1
Query: 658 ISMCSNGIEGVESSNGKACCVAECGACGGEGCSGFGADAGLGADDCCATEIADDGEACSVTMKAPCFINEDSSDD----GSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM------CSNGIDGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEIADDGKACSVTMKAPCFI 1182
I CSNG+ G+ESSNGKACC CG+CGG GCSG G+ DCC +EI ++GEAC+ T +PC+I+ D D S M C+NG+ G+ES+ G+ CC A+CG CGG GC FG +DCC+TEI D G+ CS APC++
Sbjct: 104 IERCSNGVYGIESSNGKACCALTCGSCGGVGCSGRPG----GSYDCCESEIVEEGEACAATGASPCYIDGDEVLDPVVPSMSPVVPEETDMPSGFGGGSYSYSYDFVSWDGDSMDDQFMWCTNGVPGMESAGGEVCCPADCGQCGGVGCGEFG-------EDCCITEIMDYGQPCSEIGTAPCYL 277
BLAST of mRNA_P-littoralis_Contig126.95.2 vs. uniprot
Match: A0A6H5L879_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L879_9PHAE) HSP 1 Score: 125 bits (313), Expect = 2.570e-26 Identity = 71/161 (44.10%), Postives = 94/161 (58.39%), Query Frame = 1
Query: 988 CSNGIDGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEIADDGKACSVTMKAPCFIYEGDSEDDSSVEDSSSDNGPSTCSN--GIYGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEITEDGKACLVAMEAPCFIDEDSSDD 1464
CSNGI+G+ES+NG CC A CG CGG C+ DAGL DCC ++I G +CS APC I +D+S + +TCSN G+ G+ S+NG CC +ECG CGG C+ AGL DCCV++IT++G C + APC + DS D+
Sbjct: 52 CSNGIEGIESTNGGVCCPALCGLCGGAACTKAAVDAGLDDGDCCFSDIIRFGASCSENQMAPCII-----------DDASKASAGNTCSNANGVEGISSANGDVCCPSECGLCGGRDCTQAALAAGLDDGDCCVSDITKEGVKCSDSGAAPCIV-YDSEDE 200
BLAST of mRNA_P-littoralis_Contig126.95.2 vs. uniprot
Match: D7FJ60_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ60_ECTSI) HSP 1 Score: 119 bits (298), Expect = 1.020e-24 Identity = 68/161 (42.24%), Postives = 91/161 (56.52%), Query Frame = 1
Query: 988 CSNGIDGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEIADDGKACSVTMKAPCFIYEGDSEDDSSVEDSSSDNGPSTCSN--GIYGVESSNGQACCVAECGACGGEGCSGFGADAGLGADDCCVTEITEDGKACLVAMEAPCFIDEDSSDD 1464
CSNGI+G+ES+NG CC CG CGGE C+ +AGL DCC +I G +CS APC I +D+S ++ TCSN G+ G+ S +G CC +EC CGG C+ AGL DCCV++IT++G C + APC + DS D+
Sbjct: 52 CSNGIEGIESANGDVCCPTACGFCGGEACTEAAVNAGLDDGDCCFGDIIVSGASCSENQMAPCII-----------DDASQESAGDTCSNTDGVEGISSGDGDVCCPSECVLCGGRDCTEAALAAGLADGDCCVSDITKEGVKCSDSGAAPC-VAYDSEDE 200 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig126.95.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig126.95.2 >prot_P-littoralis_Contig126.95.2 ID=prot_P-littoralis_Contig126.95.2|Name=mRNA_P-littoralis_Contig126.95.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=574bp MKPSTTASVLLGLLSAPALAMPSKASQQIEVAEGGVRFKVTRFGDGRTTPback to top mRNA from alignment at P-littoralis_Contig126:428835..436808+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig126.95.2 ID=mRNA_P-littoralis_Contig126.95.2|Name=mRNA_P-littoralis_Contig126.95.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7974bp|location=Sequence derived from alignment at P-littoralis_Contig126:428835..436808+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig126:428835..436808+ >mRNA_P-littoralis_Contig126.95.2 ID=mRNA_P-littoralis_Contig126.95.2|Name=mRNA_P-littoralis_Contig126.95.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1722bp|location=Sequence derived from alignment at P-littoralis_Contig126:428835..436808+ (Pylaiella littoralis U1_48)back to top |