prot_P-littoralis_Contig126.81.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig126.81.1
Unique Nameprot_P-littoralis_Contig126.81.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length542
Homology
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BLAST of mRNA_P-littoralis_Contig126.81.1 vs. uniprot
Match: D8LDU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU9_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 4.500e-55
Identity = 193/331 (58.31%), Postives = 206/331 (62.24%), Query Frame = 0 
Query:  163 SVGPVPGGVPGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQENALKKFKFVCSLCVKVRLKVXXXXXXXXXXXXXRRGASSPTGXXXXXXXXXXXXXXX-----------FRGDVEIVASKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVEGPSVAKKTSLKAGAAVEGGTPASPSKVPAGMPPPSSKPNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTDKPK------LKRQRSAAAEQLAKRAATEGSDEDDSWGEESLDEDGRGERGARVSAYGTRHRKGRVTYVEEASDNEDD 476
            +VGPVPGGV GSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQ+NALKKFKFVCSLCVKVRLKV             R+GAS    XXXXXXXXXXXXXX            F GDVE+V  KP                                      K    KA  A  GG          G+      P  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          + KP+            AAAEQ A+++A +GSDEDDSWGEES+DEDGRGE+GAR SAY TR RKGRVTYVEEASDNEDD
Sbjct:  111 TVGPVPGGVSGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQKNALKKFKFVCSLCVKVRLKVEKRKGKAAKVRG-RKGASXXXXXXXXXXXXXXXXXXTDAGKPSPGANGFSGDVEVVKGKPRK------------------------------------KTVKPKAADAGAGGV--------VGV-----APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGTDKKAGEGSGKPRKXXXXXXXXXXXAAAEQPARKSAMDGSDEDDSWGEESVDEDGRGEKGARASAYSTRDRKGRVTYVEEASDNEDD 391
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BLAST of mRNA_P-littoralis_Contig126.81.1 vs. uniprot
Match: A0A6H5KVU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU7_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 9.140e-48
Identity = 196/334 (58.68%), Postives = 212/334 (63.47%), Query Frame = 0 
Query:  158 SGSPPSVGPVPGGVPGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQENALKKFKFVCSLCVKVRLKVXXXXXXXXXXXXXRRGASSPTGXXXXXXXXXXXXXXX----------FRGDVEIVASKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVEGPSVAKKTSLKAGAAVEGGTPASPSKVPAGMPPPSSKPNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTDKPKLKRQRSAA------AEQLAKRAATEGSDEDDSWGEESLDEDGRGERGARVSAYGTRHRKGRVTYVEEASDNED 475
            +GS  +VGP PGGV GSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQ+NALKKFKFVCSLCVKVR   XXXXXXXXXXXXX         XXXXXXXXXXXXXX           F GDVE+V  KP                                      +K ++K  AA  G          AG     +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         + KP+              AEQ A+++A + SDEDDSWGEES+DEDGRGE+GAR SAY TR RKGRVTYVEEASDNED
Sbjct:   70 AGSATTVGPAPGGVSGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQKNALKKFKFVCSLCVKVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGKPSRGANGFSGDVEVVKGKP--------------------------------------RKKTVKPKAAGAG----------AGRVVGVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDTKAGEGSGKPRXXXXXXXXXXXXXXAEQPARKSAMDVSDEDDSWGEESVDEDGRGEKGARASAYSTRDRKGRVTYVEEASDNED 355
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig126.81.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDU9_ECTSI4.500e-5558.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVU7_9PHAE9.140e-4858.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 177..232
e-value: 1.1E-5
score: 34.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 173..234
e-value: 2.3E-10
score: 42.0
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 177..232
e-value: 5.0E-7
score: 29.5
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 175..234
score: 8.5377
NoneNo IPR availablePIRSRPIRSR628651-50PIRSR628651-50coord: 106..235
e-value: 8.6E-6
score: 23.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 522..542
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 326..542
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..167
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 173..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig126contigP-littoralis_Contig126:333535..339962 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig126.81.1mRNA_P-littoralis_Contig126.81.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig126 333535..339962 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig126.81.1 ID=prot_P-littoralis_Contig126.81.1|Name=mRNA_P-littoralis_Contig126.81.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=542bp
YRPTTLTSGGDVPPPTRCSLVLGVTHSVCSIVLVVVFGLFLCSRGVRCPG
QGAALSCFPAGNNWSPKESYRSFWYTCSERPLEGEQEACIDRHFSLSLSL
SPPSSRKKKKASSAGHSKASAARIGSSPARKKPSATPSKSSSSSKKRGGS
KKSGGGNSGSPPSVGPVPGGVPGSSIYCVCHSSDEGFMVECSDGTGGCGG
WFHPECCNLELSPEQRQENALKKFKFVCSLCVKVRLKVEKRKGKAEGKGK
SRRGASSPTGAAAAGGSRGSSSGGGFRGDVEIVASKPKKKKPAKVKAKIA
ADADAGAAAAGGGGIGSGVEGPSVAKKTSLKAGAAVEGGTPASPSKVPAG
MPPPSSKPNVLKRRRSSGGDGDGSRSKKRSAAPTGKKKNGEDGSGGGGFS
GGKTDKPKLKRQRSAAAEQLAKRAATEGSDEDDSWGEESLDEDGRGERGA
RVSAYGTRHRKGRVTYVEEASDNEDDYLTDDDGTPGGGGGQPSPSNNKRG
LAAMAAADAIASLADTNRGGGSGGGMGSSASSSSSLLSLASG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD