mRNA_P-littoralis_Contig126.81.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig126.81.1
Unique NamemRNA_P-littoralis_Contig126.81.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig126.81.1 vs. uniprot
Match: D8LDU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU9_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 4.500e-55
Identity = 193/331 (58.31%), Postives = 206/331 (62.24%), Query Frame = 1
Query:  487 SVGPVPGGVPGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQENALKKFKFVCSLCVKVRLKVXXXXXXXXXXXXXRRGASSPTGXXXXXXXXXXXXXXX-----------FRGDVEIVASKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVEGPSVAKKTSLKAGAAVEGGTPASPSKVPAGMPPPSSKPNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTDKPK------LKRQRSAAAEQLAKRAATEGSDEDDSWGEESLDEDGRGERGARVSAYGTRHRKGRVTYVEEASDNEDD 1428
            +VGPVPGGV GSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQ+NALKKFKFVCSLCVKVRLKV             R+GAS    XXXXXXXXXXXXXX            F GDVE+V  KP                                      K    KA  A  GG          G+      P  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          + KP+            AAAEQ A+++A +GSDEDDSWGEES+DEDGRGE+GAR SAY TR RKGRVTYVEEASDNEDD
Sbjct:  111 TVGPVPGGVSGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQKNALKKFKFVCSLCVKVRLKVEKRKGKAAKVRG-RKGASXXXXXXXXXXXXXXXXXXTDAGKPSPGANGFSGDVEVVKGKPRK------------------------------------KTVKPKAADAGAGGV--------VGV-----APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGTDKKAGEGSGKPRKXXXXXXXXXXXAAAEQPARKSAMDGSDEDDSWGEESVDEDGRGEKGARASAYSTRDRKGRVTYVEEASDNEDD 391          
BLAST of mRNA_P-littoralis_Contig126.81.1 vs. uniprot
Match: A0A6H5KVU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU7_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 9.140e-48
Identity = 196/334 (58.68%), Postives = 212/334 (63.47%), Query Frame = 1
Query:  472 SGSPPSVGPVPGGVPGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQENALKKFKFVCSLCVKVRLKVXXXXXXXXXXXXXRRGASSPTGXXXXXXXXXXXXXXX----------FRGDVEIVASKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVEGPSVAKKTSLKAGAAVEGGTPASPSKVPAGMPPPSSKPNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTDKPKLKRQRSAA------AEQLAKRAATEGSDEDDSWGEESLDEDGRGERGARVSAYGTRHRKGRVTYVEEASDNED 1425
            +GS  +VGP PGGV GSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQ+NALKKFKFVCSLCVKVR   XXXXXXXXXXXXX         XXXXXXXXXXXXXX           F GDVE+V  KP                                      +K ++K  AA  G          AG     +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         + KP+              AEQ A+++A + SDEDDSWGEES+DEDGRGE+GAR SAY TR RKGRVTYVEEASDNED
Sbjct:   70 AGSATTVGPAPGGVSGSSIYCVCHSSDEGFMVECSDGTGGCGGWFHPECCNLELSPEQRQKNALKKFKFVCSLCVKVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGKPSRGANGFSGDVEVVKGKP--------------------------------------RKKTVKPKAAGAG----------AGRVVGVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDTKAGEGSGKPRXXXXXXXXXXXXXXAEQPARKSAMDVSDEDDSWGEESVDEDGRGEKGARASAYSTRDRKGRVTYVEEASDNED 355          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig126.81.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDU9_ECTSI4.500e-5558.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVU7_9PHAE9.140e-4858.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig126contigP-littoralis_Contig126:333535..339962 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LDU9
PFAMsChromo,FYRC,FYRN,Helicase_C,SNF2_N
Model size1628
Max annot lvl2759|Eukaryota
KEGG koko:K14436,ko:K14437
Hectar predicted targeting categorysignal anchor
Exons6
Evalue7.39e-56
EggNOG OGsCOG0553@1|root,KOG0384@2759|Eukaryota
EC3.6.4.12
Descriptionhelicase activity
Cds size1626
COG categoryKL
BRITEko00000,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig126.81.1prot_P-littoralis_Contig126.81.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig126 333535..339962 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789556.5937836-CDS-P-littoralis_Contig126:333534..3337381680789556.5937836-CDS-P-littoralis_Contig126:333534..333738Pylaiella littoralis U1_48CDSP-littoralis_Contig126 333535..333738 +
1680789556.6070335-CDS-P-littoralis_Contig126:335364..3354611680789556.6070335-CDS-P-littoralis_Contig126:335364..335461Pylaiella littoralis U1_48CDSP-littoralis_Contig126 335365..335461 +
1680789556.6169753-CDS-P-littoralis_Contig126:335776..3358141680789556.6169753-CDS-P-littoralis_Contig126:335776..335814Pylaiella littoralis U1_48CDSP-littoralis_Contig126 335777..335814 +
1680789556.6308224-CDS-P-littoralis_Contig126:336722..3370381680789556.6308224-CDS-P-littoralis_Contig126:336722..337038Pylaiella littoralis U1_48CDSP-littoralis_Contig126 336723..337038 +
1680789556.640999-CDS-P-littoralis_Contig126:337910..3386781680789556.640999-CDS-P-littoralis_Contig126:337910..338678Pylaiella littoralis U1_48CDSP-littoralis_Contig126 337911..338678 +
1680789556.6525795-CDS-P-littoralis_Contig126:339759..3399621680789556.6525795-CDS-P-littoralis_Contig126:339759..339962Pylaiella littoralis U1_48CDSP-littoralis_Contig126 339760..339962 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig126.81.1

>prot_P-littoralis_Contig126.81.1 ID=prot_P-littoralis_Contig126.81.1|Name=mRNA_P-littoralis_Contig126.81.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=542bp
YRPTTLTSGGDVPPPTRCSLVLGVTHSVCSIVLVVVFGLFLCSRGVRCPG
QGAALSCFPAGNNWSPKESYRSFWYTCSERPLEGEQEACIDRHFSLSLSL
SPPSSRKKKKASSAGHSKASAARIGSSPARKKPSATPSKSSSSSKKRGGS
KKSGGGNSGSPPSVGPVPGGVPGSSIYCVCHSSDEGFMVECSDGTGGCGG
WFHPECCNLELSPEQRQENALKKFKFVCSLCVKVRLKVEKRKGKAEGKGK
SRRGASSPTGAAAAGGSRGSSSGGGFRGDVEIVASKPKKKKPAKVKAKIA
ADADAGAAAAGGGGIGSGVEGPSVAKKTSLKAGAAVEGGTPASPSKVPAG
MPPPSSKPNVLKRRRSSGGDGDGSRSKKRSAAPTGKKKNGEDGSGGGGFS
GGKTDKPKLKRQRSAAAEQLAKRAATEGSDEDDSWGEESLDEDGRGERGA
RVSAYGTRHRKGRVTYVEEASDNEDDYLTDDDGTPGGGGGQPSPSNNKRG
LAAMAAADAIASLADTNRGGGSGGGMGSSASSSSSLLSLASG
back to top

mRNA from alignment at P-littoralis_Contig126:333535..339962+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig126.81.1 ID=mRNA_P-littoralis_Contig126.81.1|Name=mRNA_P-littoralis_Contig126.81.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6428bp|location=Sequence derived from alignment at P-littoralis_Contig126:333535..339962+ (Pylaiella littoralis U1_48)
TATAGGCCGACGACCCTCACATCTGGCGGTGACGTTCCCCCCCCTACAAG ATGTTCGTTGGTTCTAGGCGTCACCCATAGCGTTTGTTCGATCGTGCTGG TGGTAGTGTTTGGACTGTTCTTGTGCTCTCGCGGCGTACGCTGTCCGGGG CAGGGAGCTGCACTGTCGTGCTTTCCAGCGGGCAATAACTGGTCGCCAAA AGAGGCAAGTGCTGGGGCATCACATTGTCCTTTTTTTGTCTGACGTGTGG CGGTGTGCGTGGGGCAAGAGTCGATGGCCATTTGCCTCTGCCCAGGTGCT TGAGCAAGAGTTGGTGTTGCGATGGCTGTAGAGCACGCAGGAAGTTGGCA AAGATTCAAACCCGAGGGCGGTCACGCCGTGTTGTTCCATGAGCCAAGGG TACAGGACTCATGCGCTATCACACCGCGAGGTGTCTCGTGAGTGAAAGCG AGTCGAGTTTTCTGAGTCCATCCTCTTGGAAGCTACAGTTTTACCTGTTG ACGTGACTGTTTAGTTTTGCCTGATTGCTCCGGGAAGTGGTGCTTCAGAT GATTGTGTCGGTGCTGCTACTGCTGCTGTTCTTCCGATAGTCCGCAGGAA TTCACACGTGCTCCCTGCTGCTGTAAGATGTAAAGATCGTCGGCGGTTAG CGCTTTTTCTCTCCCGCAATTTACGCAAAGGTTGCTTCGTTCTTGTTGGC ACTCAATCAACGCCCCCTCCGCTCAAGAAGGCTGCCGTTTTTGCTTTGTC TACCGGTGTGTGTGTTCATATATGCTTCTTTATATTGGTTGGACACGGGA AGAGTGCCTGGGCCTGGAAAACGGCGGCTGGTGGAGATGTGCTTCACACA CAAGATACACACAGCGGTCATTCATGTACCTGTAGTTTGGCGACATGTTC CAACGAGACTGACTCTTTCGTATACCGTACTGCTTTCTGAACATACGATC AGCTACGGTAACATACCCGGGTACTTAGTACTCGTACGTATCAAATATAC AAATATACCACCATGAAATCAGCATTCTGGTATTCTATACTTCGAAGTAG TATTCTATGACACGTCTTCGAAGTGCAAAGTGCCTCTGTGATACAAAAAT ACTCCTATGATATGATATGTACTCGTACATAAAATACCAAATGGTATCAT ACGGTAGTAGCAGTTGCCTTCTTTTTTTCAACTTTTTTTTTCGTGAGGTT GGAACATGTGCAGGCAGCTACAGCAGCAGTGAAGATGTTTCTAGTCCTGT GGGCTAGTATAAACAGTATCCGAACCATGAACGACTACTGTACAAAGCAA CACAACAGCAACAACAACAACAAACAACAACAACGACGACGACGACAACA ACAACAACAACAACAACAACAACAACAACAACAACAACTATCATATGTAT GATGACTCCATGTAGTCCAGACAGCATTAGAACGCCACCACCAACAATAA CCACGACGACGACGACGACGACGACGACGACAGCGACAACACGGACGACA CGTTTGCCTCCCTTTTGCGACTCATGGGATGCGTTCCTGTCTCTCAATGA ACCACAAACACGGATCTATGACCCCGGCTGTACACCAACAGGTCTAGTTG ATGTGTGGTACGATAAATGTCGAACTTTGCTGAATTGCGTCGAATAGTAT GATATCATATGCTGTGCCCTCTTCTCTCCCTTTCCACATACGATACGTTT TTGCAGCAAAACGTGGGTGACACAGCAGCAGTTGCTAGTGATGTGCCAAC GTTACGGCCGTACACACGAAAGTATCACAAACCTCCCCTTCCAACCCCCT CCCCCTCTCTTTCTGTTTCTTTTGGTACAGAGCTACCGGAGCTTCTGGTA TACGTGCAGTGAGCGGCCGCTGGAGGGAGAGCAGGAGGCCTGCATAGATC GCCACTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTGCACCAGG AAGTGAAGGGGAACAGGGAGGCACACCGCCGAAGTGCGCGTTGGTGTGCA TTAATTGCCATTCACCCAAACCAGCCGCCGCCGCCGCTGCCGCTGCCGCC GCCGCCGCTACACAACTCCAAAGCGACCTAGAACTGTTTCGTTCTGAGGA GAGAGGAAGATGGATTTTGAAGCGGGGGAGGCCGGGACGAACGCGACGGG GACGGACACGGCGGCCCCGACAAAGCGGCCGCTCCCGTCTCAGCGGGAAA AAACAGAATCGCCGCCTGATGGTGCGCAGTCGCCACCACCACCGCCACCA TCGTCGCGGAAAAAGAAGAAGGCTTCATCGGTGAGTTCGATTTGTTTAGG TTTGGTTTGTTTTGGTTGTGTTTGGTTTGGGGTGCTTGTTGTTGACGGGC TTTTGGTGTGAGGGTATTCTTAGAGTTGCAGCAGTGAAAACACGTTTTTG CGGGTTTCGACTTTCGGTGGCGCGCTCCCAGTGTGTGTGTGTGTGTGTGC GTATTCATCCCATTGATTTTGGACCCCAGTCTACACCTTTCGGTTTGAAG GGGGTGCACCAGCCGGGGCCACACAGAAGGAAGCGTGAAGGGGAAAAGGG GTTTGGTTTGGGTTTCCCATTCCAACGCGACCGGGCGATCGCCTTTTCGT GTGTATAAAGCACTGGCAACTCTCCAGCAGCCCTAGCCTGGCTGCCCCCC GTTGGTGACTTTATCGTACCACGACACCGGCCGAGGTCGGAGGGCCGAAG CTTCGTAGCGTTTGCTGTGCCGCATGGTATGATGCTCATCTATCTTTGCG TGCGCACGGTTACAGCATATTATTCCTCGCCTATCTTCGTAGGGTACCGA CTTGGAGCCGTTGTGCATGCGCCTCATACCCCATCGTGGACGATATTATT CGTTTTTGAGTTGATACGCACCAATGGAGAGGAGAAGGGAGGGAGGGAGA AAACCAAACACAACAAAAACCGAGCACGCGGTGGTGTAGCCTGGCTCTTG AAGAGCAACCCAAATCTGCTGCGGGAGCATTTTTATTTCCACACGATACA CCCACCCCGTCGCTTTATAGATGGATAAATACCACCACCTTGCAACCTGC TGTCTTGTGCGTCGAAAGCCTTACCTCCCAACGGTCATCCCACCGCATCC TGCCCCACCCCCCGACTCGATTTCCCTCCGATACCTCCCCCTGCCGCCGC CGCCACCGCCCTCGAACCGGCAAATTAAATAAAAAAAGGCTGGTCATTCA AAAGCGAGCGCGGCGCGAATCGGTAGCAGCCCCGCCAGGAAGAAGCCTTC AGCCACCCCCAGCAAAAGCAGCAGCAGCAGCAAAAAACGCGGCGGCAGCA AAAAGAGCGGCGGCGGCAACAGCGGCAGCCCCCCGTCCGTTGGACCGGTA CCGGGGGGCGTGCCGGGGAGTTCCATCTACTGCGTCTGCCACAGCTCGGA CGAGGGGTTCATGGTGGAGTGCTCCGACGGCACGGGGGGGTGCGGAGGCT GGTTTCACCCGGAGTGCTGTAACCTGGAGCTGAGCCCCGAGCAGCGGCAA GAGAGTGAGTTCATAAATACAGCAAGTAGTAATATATATACAGCAGTACA GCAGTGTTTTTTTTCTTGACCTGGTGCCTCTTTGCTCACCGTACTCCGAC GAACCTTTGTTTGTTTTGTGTGGTCCGGGATGCTGGTCGCATGCGTGCTT GCGTGCTTGCGTGGGTACGGGCGGCAGTCAGCCAGCTGCTGCATGCGTAG TAAAGTATGTTTACTGACGTCGGTGCCGCGGCAAGCAAGTGAGTGTAACG GTTCTTCTTTTTGTGTGTTTTTCTACGCGGCGTCGAAGGGTCTACTTGCT GTCCTATTTTTTGTGGCGGCGGGCGCACGTGCGTGCGCAGTGAACTGCTG CATAAATAAACGCTACTAGGACAGCGCTGATGTTGTGGTTGAAGGCCGCC AACACTCTCTGCGTTGCTTGTGTTCTGGTGGTGGGGGGACCTATATATGT GTATGTGTGTGCTGTCAGTGGCTTTGTAAGCGTGTCATATGTTGCCGCTG CTGGGGTCTTGACGAGAAAGCAGGTTTTGGTGAATTTCTGTTTTTTTCTT CGCAGGGTAAGACCCCTGTTTGTGTTCTCTGTGCGAGGGAATGCTTTGTT TCGGGCCTTTTCAGGACGGCCGTCTGTGCTTGTTGTTGTTGTTGTTGTTG TTGTTGTTGTTGTTGTTGTTGTTGCTATGCACAGATGGCCCTTCGTAATT TTGGTTTATGTCATTGACATTACCCCTTCTCAAAGCCTGTGCTTGCTGCT TGTTGCCTGCGGAATGCAGCGGCGAGTGTGTTTGTGTGTTTGTGATTGTC GAGGTCAAGAACAACGAAATAACCCGTACCCACCGGCGCCGCGCTTGCTC TTGCCCCCCCGCCCCCGCCCGGACAGACGCCTTAAAGAAGTTCAAGTTTG TCTGCTCGTTGTGCGTCAAGGTGCGCCTCAAGGTCGAAAAGCGGAAGGGG AAGGCGGAAGGCAAAGGGAAGAGTCGGAGAGGAGCATCGTCACCCACCGG GGCGGCGGCCGCGGGCGGCAGCCGCGGCAGCAGCAGCGGCGGCGGCTTTC GCGGTGACGTCGAAATCGTAGCCAGCAAACCGAAGAAAAAGAAGCCGGCC AAGGTGAAGGCAAAGATAGCTGCCGACGCTGATGCAGGGGCGGCGGCGGC GGGCGGCGGTGGTATAGGGTCCGGGGTCGAGGGGCCGTCGGTTGCGAAGA AGACGAGTCTGAAGGCGGGCGCCGCCGTAGAGGGGGGAACGCCGGCTTCG CCGTCGAAAGTGCCGGCAGGGATGCCGCCCCCGTCGTCCAAGCCGAACGT GCTAAAGCGGCGACGCTCTTCCGGCGGCGATGGCGACGGAAGCAGGAGCA AGAAAAGGAGTGCCGCACCCACCGGCAAGAAAAAAAATGGGGAGGACGGC AGTGGCGGCGGTGGATTTAGCGGCGGAAAGACTGACAAACCCAAGCTTAA GCGGCAGCGGTCGGCGGCGGCGGAGCAGCTTGCGAAGAGGGCGGCGACTG AGGGGTCCGACGAGGACGACTCGTGGGGGGAGGAGAGCTTGGACGAGGAC GGAAGGGGGGAGAGGGGGGCACGCGTTTCCGCCTACGGCACGCGCCACCG GAAGGGAAGGGTCACGTACGTGGAGGAAGCTTCGGACAACGAGGGTGAGA GTGGTGAATGCCGGGAATACTCGGGGAGAGGGAAGGGGGGCGCGGGGGGG GGGGGTCGTGCTCATTGCATTGGTGGCCCCTGAGATGTTGAAGCTTGACC ACCGCATGCGACGCGTTTGAGACGGAGCACGGTTCCGTTCCCACTCGTAA GGGAGTCACCGCTCGCATTCGGGCGCTCTTCTTTGAAGGGTGGGGGGTAC CGATGGAGCCGTGCGTGTGTGTGTGTGTCGTTTTTGTTGGTTGTCACGTT GGCTCACCGGCATGACCTGGCCCGTAGGTAAAGAAGAGTTAAGAGTGTTA CGCCCGACAGCAAGAAGATCCGAATTGTGAAATGTGCCATGCCTGTGTGT GTGTCTTGTGTGTCTGTTCGCGGTGAGAAGAAGCCGAGAATTCCAGATGA TGTGACACAAGGGTGGGTTCCGTGCCGTGGCAGGAGACCCCATTTCATCC CGAACTAAAACATCGACGAATACTGTACAACAGTGAAATACGGTCGAAGT AGAGGAACCACGAAGGGGTTCCGTGGATGAGACAAGGTTGTCTGGGATGG AAGCTTGAGAGAGAGACCCGCACGTTCGCTCTTGACAAGCCTCCCCAACC CATGCAGAATGGAAGCTGGGGATAGGAGTAACAGAAGAAAAATTTAAAAT TACAGCAAAAGAGAAGACGAAAAAAAAATGCAAATGACGTTCTTGCTGTA TCATGTGATACGCGCTTCGGCGAAAAATGACGTATCACCATGTTGGCGGC GAAATACAACAGGAGAGAAAGTAGCGCACACTACTGATTAACGAAACTGT TTCATATGAATCTATCCAAAATCACAAGGTGTCTTGCCACCACCACGCGG GGTCGAAGCGGGCATTCGTGGTATGTATTATGTTTTGCTTGGCATGTCGT AAACCTAATCCTAAAAAGAAAAAATATTGTTCAACATGCCCTCTCATTTG ATCTGAGCAAGTGCACGTCTTGTGTATACATACGTACCCGCTGTTGTTTG CGTTGGCACCGGCGCGTGTAAACTGTCTGCTGCTGACGCTGCCGCTGCCG CTGCTGCCACCGCCCCGCGCGCCAGACGACTACCTCACCGACGATGACGG GACGCCGGGTGGGGGCGGCGGGCAGCCGTCGCCCTCCAACAACAAACGAG GCTTGGCGGCGATGGCCGCCGCCGACGCGATCGCTTCCCTCGCCGACACC AACCGCGGCGGTGGCAGTGGCGGTGGGATGGGCTCTTCCGCCTCCTCGTC CTCCTCGCTGCTGTCGCTGGCGTCTGGT
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig126:333535..339962+

>mRNA_P-littoralis_Contig126.81.1 ID=mRNA_P-littoralis_Contig126.81.1|Name=mRNA_P-littoralis_Contig126.81.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1626bp|location=Sequence derived from alignment at P-littoralis_Contig126:333535..339962+ (Pylaiella littoralis U1_48)
TATAGGCCGACGACCCTCACATCTGGCGGTGACGTTCCCCCCCCTACAAG
ATGTTCGTTGGTTCTAGGCGTCACCCATAGCGTTTGTTCGATCGTGCTGG
TGGTAGTGTTTGGACTGTTCTTGTGCTCTCGCGGCGTACGCTGTCCGGGG
CAGGGAGCTGCACTGTCGTGCTTTCCAGCGGGCAATAACTGGTCGCCAAA
AGAGAGCTACCGGAGCTTCTGGTATACGTGCAGTGAGCGGCCGCTGGAGG
GAGAGCAGGAGGCCTGCATAGATCGCCACTTCTCTCTCTCTCTCTCTCTC
TCGCCACCATCGTCGCGGAAAAAGAAGAAGGCTTCATCGGCTGGTCATTC
AAAAGCGAGCGCGGCGCGAATCGGTAGCAGCCCCGCCAGGAAGAAGCCTT
CAGCCACCCCCAGCAAAAGCAGCAGCAGCAGCAAAAAACGCGGCGGCAGC
AAAAAGAGCGGCGGCGGCAACAGCGGCAGCCCCCCGTCCGTTGGACCGGT
ACCGGGGGGCGTGCCGGGGAGTTCCATCTACTGCGTCTGCCACAGCTCGG
ACGAGGGGTTCATGGTGGAGTGCTCCGACGGCACGGGGGGGTGCGGAGGC
TGGTTTCACCCGGAGTGCTGTAACCTGGAGCTGAGCCCCGAGCAGCGGCA
AGAGAACGCCTTAAAGAAGTTCAAGTTTGTCTGCTCGTTGTGCGTCAAGG
TGCGCCTCAAGGTCGAAAAGCGGAAGGGGAAGGCGGAAGGCAAAGGGAAG
AGTCGGAGAGGAGCATCGTCACCCACCGGGGCGGCGGCCGCGGGCGGCAG
CCGCGGCAGCAGCAGCGGCGGCGGCTTTCGCGGTGACGTCGAAATCGTAG
CCAGCAAACCGAAGAAAAAGAAGCCGGCCAAGGTGAAGGCAAAGATAGCT
GCCGACGCTGATGCAGGGGCGGCGGCGGCGGGCGGCGGTGGTATAGGGTC
CGGGGTCGAGGGGCCGTCGGTTGCGAAGAAGACGAGTCTGAAGGCGGGCG
CCGCCGTAGAGGGGGGAACGCCGGCTTCGCCGTCGAAAGTGCCGGCAGGG
ATGCCGCCCCCGTCGTCCAAGCCGAACGTGCTAAAGCGGCGACGCTCTTC
CGGCGGCGATGGCGACGGAAGCAGGAGCAAGAAAAGGAGTGCCGCACCCA
CCGGCAAGAAAAAAAATGGGGAGGACGGCAGTGGCGGCGGTGGATTTAGC
GGCGGAAAGACTGACAAACCCAAGCTTAAGCGGCAGCGGTCGGCGGCGGC
GGAGCAGCTTGCGAAGAGGGCGGCGACTGAGGGGTCCGACGAGGACGACT
CGTGGGGGGAGGAGAGCTTGGACGAGGACGGAAGGGGGGAGAGGGGGGCA
CGCGTTTCCGCCTACGGCACGCGCCACCGGAAGGGAAGGGTCACGTACGT
GGAGGAAGCTTCGGACAACGAGGACGACTACCTCACCGACGATGACGGGA
CGCCGGGTGGGGGCGGCGGGCAGCCGTCGCCCTCCAACAACAAACGAGGC
TTGGCGGCGATGGCCGCCGCCGACGCGATCGCTTCCCTCGCCGACACCAA
CCGCGGCGGTGGCAGTGGCGGTGGGATGGGCTCTTCCGCCTCCTCGTCCT
CCTCGCTGCTGTCGCTGGCGTCTGGT
back to top