prot_P-littoralis_Contig126.78.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig126.78.1
Unique Nameprot_P-littoralis_Contig126.78.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length904
Homology
BLAST of mRNA_P-littoralis_Contig126.78.1 vs. uniprot
Match: D8LDV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDV2_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 1.070e-54
Identity = 248/693 (35.79%), Postives = 301/693 (43.43%), Query Frame = 0
Query:  235 AGHGNSGGGGFGGSNSNPS-EAPGQYWHDMHRAHAEALLGGNPANLPGW--GGRG-LPSGERQHHETAVDERPRVVERNGNGSPRRGTASVQPHRGRRSLSDFLREIEEMVRAQREEERDPDNLSSGRQTAPQLLE--HSRPLAAAVMGMGTAPLQDFAMSGTHGSTRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINGLHTHESPRYLPPGERRWPTARRHVSHATADNRFPHQRP---DPVVGAGVGPYHHHHPAVRGRSEGGHGTLNGSARGPHAGWARTVLNSTYTPPP----AGYGVPTLASAAAXXXXTAGVGSETRSATQSGSASSRQTPVLHPPM----RLSATATAFSMSTGGRERSGSQQQTAYETAAAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWSSQERLVPDRIIERASRREYLDD------LSTHVNAMAVIDGGGYRTPSSQTDSLASDAGLGLASNANGGRMRQQGESHXXXXXXXXGPHLDIVPLSRMVALPAERGTATPADGGTVSAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLAALQAFRHWESQRTRLRIQWHDSNAPPEPGLTESPPTSDGTLVLVEQPSASNGPSPRGWFGTGTGGDXXXXXXXXXXXX-----NVEEALFSCLMSLGVRRLLLHERGKRGGVFARGGSRRR 899
            A H  S  GG GG   N   +APGQ    M RAHAEA    NP   PGW  GGRG L +GERQ       +  +V     N S R    + Q HRGRRSLSDFLRE+EEMVR QR E RDPD      QTAPQ     HS P+AA   GM   P Q +  SG++                                   +G H   + RY+PPG       RR +  A AD   P+Q P   +        P+HH   A      GG    N +     AG  RT+ N TYTP P    AGY  PTL ++A   XX         +AT +  A+  + P +  P+    RLSA ATAFSMS GG    G+  Q  +E  AA                                +RWS +  +    + + A R   + D         H ++ AV    G+R P         D   GL       + +++            GP L ++PLSRM ALP E GTA   DGG  +  A                                +LA L AFRHWESQR RLRIQWH+    PE    ESP  SDGTLV+ E    SNGPSPRG+   G   +       XXXXX      VEEALFSCLMSL +RRLL+ ERGK  GV  R G+ RR
Sbjct:    5 AAHDRSSHGGNGGDGGNSRFDAPGQRPAGMRRAHAEAFQSRNP---PGWPSGGRGALFAGERQRETGERPDGDQV-----NSSLRDEVMASQMHRGRRSLSDFLREVEEMVRRQRVESRDPDQFPPRPQTAPQSPTGAHSHPVAATARGMAAIPPQGYPTSGSYDGRS-----------------------------ATSGPHIGGTARYVPPG-------RRQMLRAAADAHLPYQPPVGTNAAARLATSPFHH---ATVFELPGG----NTAPPSGIAGRTRTLPNPTYTPRPFSMPAGYEAPTLPTSAVAAXXXXXXX---XAATNTAVAAQGERPPVPVPLSSSSRLSAVATAFSMSPGGY---GAPDQNHHEATAAAEGGISGLTGTEEELARQ--------------ERWSQEWTMA---VQQHALRGLSVGDGAGAHAQQQHGDSPAVF--AGHRQPGGVVPIGIPDGSSGLIPQERFTQAQREIYHDGPLQQGRHGPFLQMIPLSRMTALPPEAGTA---DGGGTAPPAMDGSYDDRVGEAIEQDQDSAQG----------HLAVLPAFRHWESQRARLRIQWHEPANAPELVPMESP-GSDGTLVVTEH-LPSNGPSPRGFDRNGARQENADFRSGXXXXXXDDVSKVEEALFSCLMSLDIRRLLM-ERGK--GVIPRAGNHRR 603          
BLAST of mRNA_P-littoralis_Contig126.78.1 vs. uniprot
Match: A0A6H5KV82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV82_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 4.870e-37
Identity = 231/690 (33.48%), Postives = 273/690 (39.57%), Query Frame = 0
Query:  235 AGHGNSGGGGFGGSNSNP-SEAPGQYWHDMHRAHAEALLGGNPANLPGW--GGRG-LPSGERQHHETAVDERPRVVERNGNGSPRRGTASVQPHRGRRSLSDFLREIEEMVRAQREEERDPDNLSSGRQTAPQLLE--HSRPLAAAVMGMGTAPLQDFAMSGTHGSTRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINGLHTHESPRYLPPGERRWPTARRHVSHATADNRFPHQRPDPVVGAG---VGPYHHHHPAVRGRSEGGHGTLNGSARGPHAGWA---RTVLNSTYTPPPAGYGVPTLASAAAXXXXTAGVGSETRSATQSGSASSRQTPVLHPPMRLSATATAFSMSTGGRERSGSQQQTAYETAAAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRWSSQERLVPDRIIERASRREYLDD------LSTHVNAMAVIDGGGYRTPSSQTDSLASDAGLGLASNANGGRMRQQGESHXXXXXXXXGPHLDIVPLSRMVALPAERGTATPADGGTVSAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLAALQAFRHWESQRTRLRIQWHDSNAPPEPGLTESPPTSDGTLVLVEQPSASNGPSPRGWFGTGTGGDXXXXXXXXXXXX-------NVEEALFSCLMSLGVRRLLLHERGKRGGVFARGGSRRR 899
            A H  S  GG GG   N   +APGQ    M RAH  A    NP   PGW  GGRG L  GERQ  ET        V    N S R    + Q HRGRRSLSDFLRE+EEMVR QR E RDPD + S  QTAPQ     H  P+AA   GM   P Q +  SG +   RN                              +G     + RY+PPG       RR +S   AD   P+Q P     A      P+HH  P V          L G    P +G A   RT+ N TY P      VP   S+++                                 RLSA ATAFSMS GG       Q  A   A  G                               +RWS +  +    + + A     + D         H N+ A +   G   P         D   GL+   +  + +++            GP L +VPLSRM  LP E GTA   DGG  +  A                                +LA L AFRHWES R RLRIQ   +N+P E    ESP  SDGTLV+ E    SNG SPRG    G   +       XXXXX        VEEALFSCLMSL +RRLL+ ERGK  GV    G+ RR
Sbjct:    5 AAHDRSSHGGNGGDGGNSWFDAPGQRPAGMRRAHIAAFQSSNP---PGWPSGGRGALFVGERQR-ETGERRHGDHV----NSSLRDEVMASQMHRGRRSLSDFLREVEEMVRRQRAEARDPDQVPSRPQTAPQPSTGVHLHPVAATARGMAAIPPQGYPTSGRYDG-RNA----------------------------TSGPQIGGTARYVPPG-------RRQLSRTAADAHSPYQPPVGATAAARLATSPFHH--PTVY--------DLPGGNTAPPSGIAGRTRTLPNPTYMPQGGRPPVPFPLSSSS---------------------------------RLSAAATAFSMSPGGYSAPDQNQHEASAAAEGG-----------------ISGLAGTEEELARQERWSQEWTMA---VQQHAPHGLSVGDGAGAHAQQQHGNSPAAV--AGQHQPGGVVRIGNPDGSSGLSPQQSFTQAQREIYHGGPLQQGRHGPFLQMVPLSRMTVLPPEAGTA---DGGGTAPPAVDGSYDDRVGEAVEQDQDSAQG----------HLAVLPAFRHWESHRARLRIQ-EPANSP-ELVPMESP-GSDGTLVVTEH-LLSNGSSPRGVDRNGARQENADFRSGXXXXXXXXXDVSKVEEALFSCLMSLDIRRLLM-ERGK--GVIPWAGNHRR 565          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig126.78.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDV2_ECTSI1.070e-5435.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV82_9PHAE4.870e-3733.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 816..840
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 540..562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..462
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 571..618
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 540..629
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 799..860
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 675..721

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig126contigP-littoralis_Contig126:321007..324732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig126.78.1mRNA_P-littoralis_Contig126.78.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig126 321007..324732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig126.78.1 ID=prot_P-littoralis_Contig126.78.1|Name=mRNA_P-littoralis_Contig126.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=904bp
MSDSIWHQRNEDRTPEGPLMFSVPTSLQEYVSRYIDMPIRHGRPMRSGNG
GLSPENFPVQHWLDNSRNRNNTAGNRPASPSSILRAAATAFEYNPSAAVP
PPVAVSPGDAITEEPVPAAGTPTHFDHLATWRNMSWPVDPLESEGQPELR
RRFGGHGNENGGEDSGRGAGRRRVQARSASRGGRPQSSTDARRAGGGLVV
GVTGVGDSGTGGWNPEGDGGVAYLPFSSMHGAPPAGHGNSGGGGFGGSNS
NPSEAPGQYWHDMHRAHAEALLGGNPANLPGWGGRGLPSGERQHHETAVD
ERPRVVERNGNGSPRRGTASVQPHRGRRSLSDFLREIEEMVRAQREEERD
PDNLSSGRQTAPQLLEHSRPLAAAVMGMGTAPLQDFAMSGTHGSTRNNSS
NNNINNTRNNSSNNNSNNNNNNNNNNINGLHTHESPRYLPPGERRWPTAR
RHVSHATADNRFPHQRPDPVVGAGVGPYHHHHPAVRGRSEGGHGTLNGSA
RGPHAGWARTVLNSTYTPPPAGYGVPTLASAAAAATTTAGVGSETRSATQ
SGSASSRQTPVLHPPMRLSATATAFSMSTGGRERSGSQQQTAYETAAAGP
SDSSNGGSVDSNSNATVVEREEIARRQQRQQRWSSQERLVPDRIIERASR
REYLDDLSTHVNAMAVIDGGGYRTPSSQTDSLASDAGLGLASNANGGRMR
QQGESHGHAHGHAHGPHLDIVPLSRMVALPAERGTATPADGGTVSAAATA
AAAAAAAGGNNGSGAGAGARVTSDQGQGQGNLAALQAFRHWESQRTRLRI
QWHDSNAPPEPGLTESPPTSDGTLVLVEQPSASNGPSPRGWFGTGTGGDN
EGSNSSSSSSSNVEEALFSCLMSLGVRRLLLHERGKRGGVFARGGSRRRC
VCV*
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