mRNA_P-littoralis_Contig126.53.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig126.53.1
Unique NamemRNA_P-littoralis_Contig126.53.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig126.53.1 vs. uniprot
Match: D8LDV8_ECTSI (Ribose-5-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDV8_ECTSI)

HSP 1 Score: 449 bits (1156), Expect = 4.460e-154
Identity = 228/233 (97.85%), Postives = 230/233 (98.71%), Query Frame = 3 
Query:  126 ASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLGIPLVTLSTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKGCDAKLREEDGKPYVTDNDNYIVDLYFTEPIKDATQAGKEMLETVGVVEHGLFLDMSFAVISAGSDGITVKTK 824
            ASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESL IPLVTL THSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKGCDAKLREEDGKPYVTDNDNYIVDLYFT+PIKDA QAGKEMLETVGVVEHGLFLDMSFAVISAG+DGITVKTK
Sbjct:    2 ASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKGCDAKLREEDGKPYVTDNDNYIVDLYFTDPIKDANQAGKEMLETVGVVEHGLFLDMSFAVISAGTDGITVKTK 234
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BLAST of mRNA_P-littoralis_Contig126.53.1 vs. uniprot
Match: A0A6T5NRP6_HETAK (Ribose-5-phosphate isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NRP6_HETAK)

HSP 1 Score: 377 bits (967), Expect = 6.640e-125
Identity = 190/233 (81.55%), Postives = 206/233 (88.41%), Query Frame = 3 
Query:  120 MAASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLGIPLVTLSTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKGCDAKLREEDGKPYVTDNDNYIVDLYFTEPIKDATQAGKEMLETVGVVEHGLFLDMSFAVISAGSDGITVK 818
            M A+QDELKKQVGYK++DDYVTSGMVVGLGTGSTAAFAVERLGEL+ SGELKDIVAIPTS+RTKEQAESLGIPLVTL THS LDVAIDGADEVDP+LNLVKGRGGALLREKMVEVCAKKFIVIVDDSK V GLGI GAMPVEVTPFCWEH+L  +    S+KGC A+LR +  KPYVTDNDNYI+DLYF EPIKD  +A +EML  VGVVEHGLFLDM+ AV+ AG DGI VK
Sbjct:   37 MMATQDELKKQVGYKAIDDYVTSGMVVGLGTGSTAAFAVERLGELMASGELKDIVAIPTSVRTKEQAESLGIPLVTLDTHSDLDVAIDGADEVDPELNLVKGRGGALLREKMVEVCAKKFIVIVDDSKLVDGLGIDGAMPVEVTPFCWEHSLQRLTAAESLKGCTAELRMDGDKPYVTDNDNYIIDLYFKEPIKDTRKAAEEMLNMVGVVEHGLFLDMTTAVLIAGKDGIEVK 269
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BLAST of mRNA_P-littoralis_Contig126.53.1 vs. uniprot
Match: A0A7S3A473_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A473_9RHOD)

HSP 1 Score: 376 bits (965), Expect = 1.380e-124
Identity = 197/235 (83.83%), Postives = 203/235 (86.38%), Query Frame = 3 
Query:  120 MAASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLGIPLVTLSTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKGCDAKLREEDGKPYVTDNDNYIVDLYFTEPIKDATQAGKEMLETVGVVEHGLFLDMSFAVISAGSDGITVKTK 824
            MAAS DELKK VGYKSVDDYVTSGMVVGLGTGSTA FAVERLGE LKSGELKDIVAIPTSIRTKEQAE L IPLVTL TH VLDVAIDGADE D DLNLVKGRGGALLREKMVEV AKKFIVIVDDSK VPGLG+SGAMPVEVTPFCWE TLN +K   S+ GCDAKLR E  KPYVTDNDNYIVDLYF EPIKDA  A KE+LE VGVVEHGLFLDM+ AVI AG DG+ V  K
Sbjct:   39 MAASVDELKKVVGYKSVDDYVTSGMVVGLGTGSTAYFAVERLGEKLKSGELKDIVAIPTSIRTKEQAEGLDIPLVTLDTHPVLDVAIDGADEYDDDLNLVKGRGGALLREKMVEVQAKKFIVIVDDSKKVPGLGVSGAMPVEVTPFCWEFTLNKLKGAASVAGCDAKLRMEGDKPYVTDNDNYIVDLYFEEPIKDANAAAKEILEMVGVVEHGLFLDMTTAVIVAGKDGVEVIEK 273
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BLAST of mRNA_P-littoralis_Contig126.53.1 vs. uniprot
Match: A0A7S0T664_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T664_9RHOD)

HSP 1 Score: 371 bits (953), Expect = 1.560e-122
Identity = 191/241 (79.25%), Postives = 209/241 (86.72%), Query Frame = 3 
Query:  102 RASALSMAASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLGIPLVTLSTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKGCDAKLREEDGKPYVTDNDNYIVDLYFTEPIKDATQAGKEMLETVGVVEHGLFLDMSFAVISAGSDGITVKTK 824
            R  A+ M A  +ELKK VGYKSVDDYVTSGMVVGLGTGSTA FAVERLG+ LKSGELKDIVAIPTSIRTKEQAESL IPLVTL TH VLDVAIDGADEVD DLNLVKGRGGALLREKMVEV AKKFIVIVDDSK VPGLG+SGAMPVEVTPFC+EHTL  +K+ PS+ GCDAKLR +  KPYVTDNDNYIVDLYF +PI DA +A +EM+  VGVVEHGLFLDM+ AV+ AG +G+ +KTK
Sbjct:   49 RRRAVCMMADVEELKKDVGYKSVDDYVTSGMVVGLGTGSTAYFAVERLGQKLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHPVLDVAIDGADEVDDDLNLVKGRGGALLREKMVEVQAKKFIVIVDDSKLVPGLGVSGAMPVEVTPFCYEHTLKRLKDAPSLAGCDAKLRMDGEKPYVTDNDNYIVDLYFEKPIADANKAAEEMINMVGVVEHGLFLDMTTAVLIAGKNGVEMKTK 289
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BLAST of mRNA_P-littoralis_Contig126.53.1 vs. uniprot
Match: A0A7S1TKQ2_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKQ2_9RHOD)

HSP 1 Score: 366 bits (939), Expect = 1.690e-120
Identity = 186/233 (79.83%), Postives = 205/233 (87.98%), Query Frame = 3 
Query:  126 ASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLGIPLVTLSTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKGCDAKLREEDGKPYVTDNDNYIVDLYFTEPIKDATQAGKEMLETVGVVEHGLFLDMSFAVISAGSDGITVKTK 824
            AS DELKK VGYKSVDDYVTSGMVVGLGTGSTA FAVERLGE LKSGELKDIVAIPTSIRTKEQAESL IPLVTL TH +LDVAIDGADEVD DLNLVKGRGGALLREKMVEV AKKFIVIVDDSK V GLGISGAMPVEVTPFC+EH+L  ++  PS+ GC+AKLR +  KPYVTDNDNYI+DLYF +PIKDA +A +EM+  VGVVEHGLFL+M+ AV+ AG +G+ +KTK
Sbjct:   52 ASVDELKKVVGYKSVDDYVTSGMVVGLGTGSTAYFAVERLGEKLKSGELKDIVAIPTSIRTKEQAESLDIPLVTLDTHPILDVAIDGADEVDDDLNLVKGRGGALLREKMVEVQAKKFIVIVDDSKLVTGLGISGAMPVEVTPFCYEHSLKRLQEAPSLAGCEAKLRMDGDKPYVTDNDNYIIDLYFKQPIKDANKAAEEMINMVGVVEHGLFLNMTTAVLIAGKNGVEIKTK 284
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BLAST of mRNA_P-littoralis_Contig126.53.1 vs. uniprot
Match: A0A7S0ZKY8_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKY8_9RHOD)

HSP 1 Score: 363 bits (931), Expect = 4.110e-119
Identity = 192/249 (77.11%), Postives = 210/249 (84.34%), Query Frame = 3 
Query:   78 RPSPSRAVRASALSMAASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLGIPLVTLSTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKGCDAKLREEDGKPYVTDNDNYIVDLYFTEPIKDATQAGKEMLETVGVVEHGLFLDMSFAVISAGSDGITVKTK 824
            RP+ S A   S+L MA S +ELK+ VGYKS+DDYVTSGMVVGLGTGSTA FAVERLG+ L SGELKDIVAIPTSIRTKEQAESL IPLVTL TH VLDVAIDGADEVDPDLNLVKGRGGALLREKMVEV AKKFIVIVDDSK V GLGISGAMPVEVTPFCWEH+L  +K   S+ GCDAKLR +  KPYVTDNDNYIVDLYF  PIKDA +A  +M+  VGVVEHGLFL+M+ AV+ AG +G+ VK K
Sbjct:   49 RPTVSSARTPSSLRMA-SVEELKQVVGYKSIDDYVTSGMVVGLGTGSTAYFAVERLGQKLASGELKDIVAIPTSIRTKEQAESLNIPLVTLDTHPVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVQAKKFIVIVDDSKMVEGLGISGAMPVEVTPFCWEHSLKRLKECESLAGCDAKLRMDGEKPYVTDNDNYIVDLYFETPIKDAEKAAADMINMVGVVEHGLFLNMTTAVLIAGKNGVEVKLK 296
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BLAST of mRNA_P-littoralis_Contig126.53.1 vs. uniprot
Match: A0A5J4YW31_PORPP (Ribose-5-phosphate isomerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW31_PORPP)

HSP 1 Score: 361 bits (927), Expect = 1.160e-118
Identity = 187/235 (79.57%), Postives = 199/235 (84.68%), Query Frame = 3 
Query:  120 MAASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLGIPLVTLSTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKGCDAKLREEDGKPYVTDNDNYIVDLYFTEPIKDATQAGKEMLETVGVVEHGLFLDMSFAVISAGSDGITVKTK 824
            M A  +ELKK VGYKSVDDYV+SGMVVGLGTGSTA FAVERLG+ L SGELKD+VAIPTS+RTKEQAESL IPLVTL TH  LDVAIDGADEVDP LNLVKGRGGALLREKMVEV A KFIVIVDDSK V GLGISGAMPVEVTPFCWE TLN +K   S+ GCDAKLR  DGKPYVTDNDNYIVDLYFTEPIKDA  A  E+   VGVVEHGLFLDM+ AV+ AG +G+ VK K
Sbjct:   52 MMADVEELKKVVGYKSVDDYVSSGMVVGLGTGSTAYFAVERLGQKLASGELKDVVAIPTSLRTKEQAESLNIPLVTLDTHPKLDVAIDGADEVDPALNLVKGRGGALLREKMVEVMADKFIVIVDDSKLVDGLGISGAMPVEVTPFCWEFTLNRLKQAKSLTGCDAKLRMADGKPYVTDNDNYIVDLYFTEPIKDAQAAATEINSMVGVVEHGLFLDMTTAVLIAGKNGVEVKLK 286
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BLAST of mRNA_P-littoralis_Contig126.53.1 vs. uniprot
Match: K8Z9G7_NANGC (Ribose-5-phosphate isomerase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z9G7_NANGC)

HSP 1 Score: 355 bits (910), Expect = 3.560e-116
Identity = 183/235 (77.87%), Postives = 198/235 (84.26%), Query Frame = 3 
Query:  123 AASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLGIPLVTLSTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKGC-DAKLREEDGKPYVTDNDNYIVDLYFTEPIKDATQAGKEMLETVGVVEHGLFLDMSFAVISAGSDGITVKTK 824
            A SQDELKKQVGYKSVDDYV SGMVVGLGTGSTAAFAVERLG  LK+GELKDIVAIPTSIRTKEQAESLG+PLVTL +HSVLDVAIDGADEVDP LNLVKGRGGALLREKMVEVCAKKFIVIVDDSK VPGLG++GAMPVE+TPFC EHT  T+  LP +KG    KLR +  KPYVTDNDNYIVDLY+T+PI D     + +   VGVVEHG FLDM+ AVI AG +GI V  K
Sbjct:   46 AVSQDELKKQVGYKSVDDYVQSGMVVGLGTGSTAAFAVERLGMKLKAGELKDIVAIPTSIRTKEQAESLGVPLVTLDSHSVLDVAIDGADEVDPALNLVKGRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHTQRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVARALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINK 280
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BLAST of mRNA_P-littoralis_Contig126.53.1 vs. uniprot
Match: A0A2V3J0N4_9FLOR (Ribose-5-phosphate isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0N4_9FLOR)

HSP 1 Score: 352 bits (904), Expect = 6.140e-116
Identity = 184/235 (78.30%), Postives = 199/235 (84.68%), Query Frame = 3 
Query:  114 LSMAASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLGIPLVTLSTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKGCDAKLREEDGKPYVTDNDNYIVDLYFTEPIKDATQAGKEMLETVGVVEHGLFLDMSFAVISAGSDGITVK 818
            +++A S DELKK  GYK+VDDYV SGMVVGLGTGSTAAFAVERLG+ L SGEL DIVAIPTSIRTKEQAESLGIPLV L TH VLDVAIDGADEVDPDLNLVKGRGGALLREKMVEV AKKFIVIVD+SK V GLGISGAMPVEVTPFC++  L+ + NLPSIKGC AKLR +  KPYVTDNDNYIVDL+F  PIKDA  A  E+   VG+VEHGLFL MS AVI AG DG+ VK
Sbjct:    1 MAVAPSVDELKKLTGYKAVDDYVKSGMVVGLGTGSTAAFAVERLGQKLSSGELSDIVAIPTSIRTKEQAESLGIPLVQLDTHPVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVQAKKFIVIVDESKLVDGLGISGAMPVEVTPFCYQFNLDRLLNLPSIKGCTAKLRMDADKPYVTDNDNYIVDLFFDTPIKDAALAASEIRSLVGIVEHGLFLGMSSAVIIAGKDGVYVK 235
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BLAST of mRNA_P-littoralis_Contig126.53.1 vs. uniprot
Match: A0A6T6DAD6_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6DAD6_9RHOD)

HSP 1 Score: 345 bits (884), Expect = 5.240e-112
Identity = 178/233 (76.39%), Postives = 196/233 (84.12%), Query Frame = 3 
Query:  129 SQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGELKDIVAIPTSIRTKEQAESLGIPLVTLSTHSVLDVAIDGADEVDPDLNLVKGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEHTLNTVKNLPSIKGCDAKLR-EEDGKPYVTDNDNYIVDLYFTEPIKDATQAGKEMLETVGVVEHGLFLDMSFAVISAGSDGITVKTK 824
            S DELK+  GYK+VDDYVTSGMVVGLGTGSTA FAVERLG+ L SGELKDIVAIPTSIRTK+QAE L IPLVTL TH +LDVAIDGADEVD +LNLVKGRGGALLREKMVEV AKKFIVIVDDSK V GLGISGAMPVE+TPFCW+H+LN + N P++ GC AKLR + +G PYVTDNDNYIVDLYF  PIKD   A +E+   VG+VEHGLFLDM+ A I A S GI VKTK
Sbjct:   66 SVDELKQAAGYKAVDDYVTSGMVVGLGTGSTAYFAVERLGQKLASGELKDIVAIPTSIRTKDQAEGLKIPLVTLDTHPILDVAIDGADEVDSELNLVKGRGGALLREKMVEVQAKKFIVIVDDSKLVSGLGISGAMPVEITPFCWQHSLNRLLNAPTLAGCTAKLRMDANGNPYVTDNDNYIVDLYFDTPIKDPKAAAEEINSMVGIVEHGLFLDMTTACIIAKSGGIEVKTK 298
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig126.53.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDV8_ECTSI4.460e-15497.85Ribose-5-phosphate isomerase n=1 Tax=Ectocarpus si... [more]
A0A6T5NRP6_HETAK6.640e-12581.55Ribose-5-phosphate isomerase n=1 Tax=Heterosigma a... [more]
A0A7S3A473_9RHOD1.380e-12483.83Ribose-5-phosphate isomerase n=1 Tax=Rhodosorus ma... [more]
A0A7S0T664_9RHOD1.560e-12279.25Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus ... [more]
A0A7S1TKQ2_9RHOD1.690e-12079.83Ribose-5-phosphate isomerase n=1 Tax=Erythrolobus ... [more]
A0A7S0ZKY8_9RHOD4.110e-11977.11Ribose-5-phosphate isomerase n=1 Tax=Timspurckia o... [more]
A0A5J4YW31_PORPP1.160e-11879.57Ribose-5-phosphate isomerase n=1 Tax=Porphyridium ... [more]
K8Z9G7_NANGC3.560e-11677.87Ribose-5-phosphate isomerase n=3 Tax=Monodopsidace... [more]
A0A2V3J0N4_9FLOR6.140e-11678.30Ribose-5-phosphate isomerase n=1 Tax=Gracilariopsi... [more]
A0A6T6DAD6_9RHOD5.240e-11276.39Ribose-5-phosphate isomerase n=1 Tax=Compsopogon c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig126contigP-littoralis_Contig126:182185..187899 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LDV8
Preferred nameRPI2
PFAMsRib_5-P_isom_A
Model size1711
Max annot lvl2759|Eukaryota
KEGG rclassRC00434
KEGG koko:K01807
KEGG ReactionR01056
KEGG Pathwayko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00004,M00007,M00165,M00167,M00580
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000271,GO:0003006,GO:0003674,GO:0003824,GO:0004751,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006073,GO:0006139,GO:0006213,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0007275,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009116,GO:0009119,GO:0009163,GO:0009250,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009719,GO:0009725,GO:0009735,GO:0009791,GO:0009941,GO:0009987,GO:0010033,GO:0010228,GO:0015977,GO:0015979,GO:0016020,GO:0016051,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019253,GO:0019438,GO:0019685,GO:0022414,GO:0030243,GO:0030244,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0033692,GO:0034357,GO:0034404,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042455,GO:0042651,GO:0042742,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046108,GO:0046109,GO:0046131,GO:0046132,GO:0046134,GO:0046483,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051273,GO:0051274,GO:0051704,GO:0051707,GO:0055035,GO:0055086,GO:0061458,GO:0071704,GO:0072527,GO:0072528,GO:0080167,GO:0098542,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
Exons8
Evalue1.09e-160
EggNOG OGsCOG0120@1|root,KOG3075@2759|Eukaryota
EC5.3.1.6
Descriptionribose-5-phosphate isomerase activity
Cds size708
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig126.53.1prot_P-littoralis_Contig126.53.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig126 182304..187015 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789555.1685994-UTR-P-littoralis_Contig126:182184..1823031680789555.1685994-UTR-P-littoralis_Contig126:182184..182303Pylaiella littoralis U1_48UTRP-littoralis_Contig126 182185..182303 +
1680789555.2888322-UTR-P-littoralis_Contig126:187015..1878991680789555.2888322-UTR-P-littoralis_Contig126:187015..187899Pylaiella littoralis U1_48UTRP-littoralis_Contig126 187016..187899 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789555.1873803-CDS-P-littoralis_Contig126:182303..1823361680789555.1873803-CDS-P-littoralis_Contig126:182303..182336Pylaiella littoralis U1_48CDSP-littoralis_Contig126 182304..182336 +
1680789555.200271-CDS-P-littoralis_Contig126:182931..1830131680789555.200271-CDS-P-littoralis_Contig126:182931..183013Pylaiella littoralis U1_48CDSP-littoralis_Contig126 182932..183013 +
1680789555.211687-CDS-P-littoralis_Contig126:183486..1836151680789555.211687-CDS-P-littoralis_Contig126:183486..183615Pylaiella littoralis U1_48CDSP-littoralis_Contig126 183487..183615 +
1680789555.232054-CDS-P-littoralis_Contig126:183846..1839441680789555.232054-CDS-P-littoralis_Contig126:183846..183944Pylaiella littoralis U1_48CDSP-littoralis_Contig126 183847..183944 +
1680789555.2445726-CDS-P-littoralis_Contig126:184549..1846171680789555.2445726-CDS-P-littoralis_Contig126:184549..184617Pylaiella littoralis U1_48CDSP-littoralis_Contig126 184550..184617 +
1680789555.2604597-CDS-P-littoralis_Contig126:185372..1854481680789555.2604597-CDS-P-littoralis_Contig126:185372..185448Pylaiella littoralis U1_48CDSP-littoralis_Contig126 185373..185448 +
1680789555.2692628-CDS-P-littoralis_Contig126:186316..1864361680789555.2692628-CDS-P-littoralis_Contig126:186316..186436Pylaiella littoralis U1_48CDSP-littoralis_Contig126 186317..186436 +
1680789555.278445-CDS-P-littoralis_Contig126:186913..1870151680789555.278445-CDS-P-littoralis_Contig126:186913..187015Pylaiella littoralis U1_48CDSP-littoralis_Contig126 186914..187015 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig126.53.1

>prot_P-littoralis_Contig126.53.1 ID=prot_P-littoralis_Contig126.53.1|Name=mRNA_P-littoralis_Contig126.53.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=236bp
MAASQDELKKQVGYKSVDDYVTSGMVVGLGTGSTAAFAVERLGELLKSGE
LKDIVAIPTSIRTKEQAESLGIPLVTLSTHSVLDVAIDGADEVDPDLNLV
KGRGGALLREKMVEVCAKKFIVIVDDSKFVPGLGISGAMPVEVTPFCWEH
TLNTVKNLPSIKGCDAKLREEDGKPYVTDNDNYIVDLYFTEPIKDATQAG
KEMLETVGVVEHGLFLDMSFAVISAGSDGITVKTK*
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mRNA from alignment at P-littoralis_Contig126:182185..187899+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig126.53.1 ID=mRNA_P-littoralis_Contig126.53.1|Name=mRNA_P-littoralis_Contig126.53.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5715bp|location=Sequence derived from alignment at P-littoralis_Contig126:182185..187899+ (Pylaiella littoralis U1_48)
TTGCGCCCTCTAGCGTCCGCACCAGCAGCGCGTGGGGAGTTACCTCTTCC
CCTTCTGCTTCCTTGTCGACGGCGGTACGGCCATCACCATCGAGGGCGGT
TAGGGCTTCGGCGCTGAGCATGGCGGCCTCTCAGGACGAGCTCAAGAAGC
AGGTACGTGCAGCGTACGACCACATCGTGCATCGTGCGTGCAGCAGACCA
TGTGACTGTTGTTGATTTATTTGCGTATTAAATTTCGCCAGTGGTGGCCA
CACAAAGTGCAACAGCCCTGCCTGCACAGGAAGAGGGAGGCCACACAATC
GCCCCCCCCCTGTAAGGTCATGAAGACGAAACCGCCGTGGCCACGCCCGG
CCTAGTTGAATGCCTGCAGGAGTGTCGTAGTAATAGTCGCACAGCAGTTA
AAAGTCAATCTTATTAGGGCCGAGAAGAACCCCTCAATAATTGAGGGGTG
CCCTCCTCCCATGCGCTGCTGTGTCATGTCCGTGTTGTGGATTTTTGTTT
TTGCTCCTGTTATTTTTTTTGCGTTGTTGTCCTGAATTTTGTGTGTGTTA
CTAAATGTCTGTTTCTGTCAATGTGAGGTTTATTTGCGGGTTCCCTCCTG
CGTCATTTTTTCATCGTTTTTGCATCGTTATTTTCGTGGTGCTTTTTATC
TTTTTATTGTCTTCATTAAATTGTCAATCGATGAATTGGTTGATTGGCCC
ACTCTTGTGTGATGGATGTCCCTGTTTTTATTTTTTATTTTTATCAGGTG
GGGTACAAGTCTGTGGATGACTACGTGACGAGCGGCATGGTCGTCGGCCT
GGGCACGGGCTCCACCGCAGCCTTCGCCGGTAATTGGTGGTGGTGGTGGT
GCTGTTGCTGCTGCTCCTGCTATTGTACTTTCCGTGCATCACGCTCATCC
GTTGTCGCATGACGCATTGTCGATGTGTTCTGGCCGAGCACATTAAAATA
CGAGGCAGCCATCATACATATATACCTGTCGCGTATTTTTTCCCAAGGCT
GTACCTGCAAGTAACCACAAACACCAGAAATCGAACAGAGTTGATCGGAG
TCTGTCCATCCAACGCGCGGGAGTGGGCCCATCCAGCGGCCCTTAGCACT
GCCTGTAAGGATGCAGTCCACCCCCAAAATGCGACTGGCCCAGCACCTCA
CGGCGCCTGAATTTTCTGGAGCGAATTTGTATCGCCTCTGCCTGGTCGGT
GAAAGCTGAGGGTCTACGGTCTTAAATCAAGACTACGACCATGCATGACA
ATGGTTACCCGTCCCCCCCCTACCACCCCCCCCCCCCGTCCACCTCACGC
AGTGGAGCGCCTTGGGGAGCTGCTGAAAAGCGGCGAGCTGAAGGACATCG
TAGCGATCCCCACGTCCATCCGCACCAAGGAGCAGGCGGAGTCCCTCGGC
ATCCCGCTGGTCACGCTGAGCACCCACTCCGGTACGTGTTCTTTCTTCGT
TGCTGTTTTTGTGTGAACCAATTCGTTCACGAAGAAAAGTTACTGAACGT
GGTTTTGCGTGGGGTATCCGGGGCACCACGTTCAACATCCCCGGGGTGGG
GCGCCCATCCCCGCCCTCCCGCTATACATCTACTTGTAACTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGTTTGTTGTTGTCTTTTTCTATC
TGTACCCGGTAGTGCTGGACGTGGCTATCGACGGCGCGGACGAGGTGGAC
CCGGACCTTAACCTGGTAAAGGGCCGAGGCGGAGCGCTGTTGAGGGAGAA
GATGGTGGAGGTGCGTGCGAGAGAGGCGTGATTTTTTCATTTAGCAGGAC
AAACCTGAAGCTGGTGCAGCTGTAGAGCGAAGCGAAGCATCCGTTCGATC
GTGGGGGGGGGGGGGGGGGGCTCTTCGTTGAAAGATTCTGATGCTTGTGT
CGGACGCACCCTGTTGGCGTTTGGCGAGCGTGCTTTGTTGAGTGCACAGC
TGCACGAGGAGGTCGTCGCACGCCGTTGGGACAAGCATGGGCATACGGAG
ACGTTGGAACGAGGCCCGAACGGTCTACAAAATGTTTTGAGAACAACAAC
GACAAGAACAGCATAGTCAGCAGCAGCAGCAGCAGCAGTAACAACGTCGT
CAATAACGAGAACGAGAACGATGATGGCACCAACGCGCTCGATCTCACCG
GCATCATCTTCGGCGATATGACATCTCGACATTGTTTCAATTTTTTTTTT
AATTTTTTTTTCTTGTCTTTTCTCATTTCTGTCTTGGACTCTCCTTTCCG
ACCTATCACTGCACGCGTCACACTTGTTGGTGTTCGCTCATTCATGCTGT
TCCCTTGTCTCCTATCGTTCTCCTCTCTCTCTCTCTTGCGCCTGTCTGTG
TTCGCTCGTGTTCAGGTTTGCGCCAAGAAGTTCATCGTCATCGTCGACGA
CTCCAAGTTTGTGCCCGGCCTCGGCATCTCGGGGTGAGTCGAGTCAGGCA
AAAAGAGCAGGGCGGGCGGGCGGGGGAAACGGTCGTGTGGTATTTTCGGA
CGTAACCAAAGGTATACGGACAGGCAGAGGTGGACACAGGGGTGGCGAGT
TTCGGATGCAAGATGAGGAGACTCATGTGATCATATGATATCACATGAAA
CGTACATTCGAATTTATGTCGTACACTTCGAAGGACAACTGCTGTGCATG
AGTGTGCCAACGGCACGACTGTCGGCGAGTCGTTGGGCTGTTTCATCTAC
TGCATGGTACTGTTATTTCATATAGTTTTCTTTTGTTCGGCTTTTGAGCT
GGTCCCGCCGTGGCATATCATATGGCTTGCCGTGTTGGCCGATGGCATAC
ATCACTTTCGCGAGCACTTACGAAGAACTTTAGTTGCACCAGGTCTTGTG
TGTGCATTGCGTGGACGATCACGGGAGTTTTGTCCCGTACGTGTGTATGT
ATGCCCGGTCGGCGTTGCGAACGGTGCCACCCCCCCTCCTCTAGTCAAAA
GAGCACAGCAGATAGGATAACTAACACCCACCATGCGTGATGCAGACGTC
GGCATTGACTTAGTGAGCACTCACCCATACGAGCATGTGAGCGATATTTG
CTCTCCGTCTCAACCGAGGTCCGGGTTCAATGCTCCAACGAGGCCCGGAG
GAATGCCACGAGCGACACATGGCGAAGTAACCCCTGTCCCTCTGCCCTCC
ACCCCTGCCTTCTGTCTTTCAACTCTTTCTGTCATCAGGGCGATGCCCGT
GGAGGTTACCCCCTTCTGCTGGGAGCACACCCTCAACACCGTCAAGAACT
TGCCCAGCATTAAGGTCAAGTCACCGAAAATTGCGCAAGGCGCACGCCCC
AGACTGCTGTATGCGTGCATGCGTCACGGATCGAATGGCTTGCAGCAACA
TTAAGTGTAGATGTTTGTTTGGCCAGATACCGTTGTTGGTGGACAAACGC
GAACAAGCGCGTCTCTTCCTAGAACACTTGCGAGCTGCTGTTGGTGTGAT
TTTTGCAGTTGCACACACACAAAAGCAAAAAAGTTTACGACGGCGAACTG
ACTCTTGAGCCCGAACGCGACACGTCAGTGCAGTTCCACCATGCCGCCTT
GAGAGCGCGTTGCGAGGGATTGACCCCTATAACCCTTGCTTGCACGCGAT
AGCAAAAGAGCAAAACAAATTCAACCCAATTGAGCATGAAAGGTGCACGG
GTCTGCGCCTTACTCGGTATCCCCACAAGCAGCATGGCACTCGCCCCGCT
CCGGGTTTGCCGAGCTCGATCGCCCCAACATTCATCAGAGGTACTGCTGT
CATACTTTGTGCTGCTCTATGATAAACACAACCCCGAAGTCTGTGTCGCT
TTTGAAGTTTTTCTCCGCGGGTGCCCTTTCAGATACTGATACCCTTATTT
TGAAGTGAAAACGTATCATGTGCGTGTGTGTGCGAGTGTAGGTGTCAGTC
TTGGAATGTCCACTCTTCGGGGCGTCTACTATGCAAATGTAGGAGTATCC
CGTACCTGCCGGCGAAAACACAACGCTGCGCCTTTTTTTTTATTATTCTG
CTTGCGAAGTATTTCACCCGACCGTATTTTTTTTTTTCTTCTCTTTTTGC
GCCACGGACCAATCAATGGGTGGATGTGTGAATGTGCCTTCTTGGTGTTT
TGTTCGGCCCATGTTTTGTTGATGTGGTGCAGGGCTGCGACGCCAAGCTC
CGTGAGGAGGACGGCAAGCCGTACGTGACGGACAACGACAACTACATCGT
CGATCTGTACTTCACCGAACCCATCAAGGACGCCACGCAGGCCGGCAAGG
AGGTATGTATAACCCGGCATGACATCGCATGGCATGGCATGCATGGCATG
ATGTGGCGCGACCTCTGTCAGAGTTGGCGTAGAAACTGGCGGGGGGAGGG
GGGGGGGCTGCCGGTCCAACCTCGATGTAAAATTGAATACACAGCAGTTC
AGTTTTTTTTCAATACCTACTTGCTCGTGTGTATGTGTAATTTTGTTGTG
TGTGTCTGTACTTCATCAAGTCTTTCGAGGACACAATCTACAGGCTGCGC
AATGGAGCGCCGTGCTGCGCAAGGAAGCTCCGCGAGGAGGAGCGAAAGTC
CGTACCTAGCGGCACGTGGCCAAACGTTAAAACACCAAGCAGGGAATCTG
TCGTGTTGGAATCACCTGTGGAGCCAGTGTACATTTATTTCGAGGCCCCC
AATGAACCCCCCATCAAAAACAAACCCCGCTCATTGGGACTTTCCGAATG
GGCCCCTCATTTCGTCTTTTATTTCCCAGATGCTGGAGACCGTGGGTGTG
GTGGAGCACGGGCTGTTCCTCGACATGTCTTTCGCGGTCATCTCGGCAGG
CTCCGACGGCATCACCGTCAAGACCAAATAAGCGGCTACCTTGGCAAACT
GCCTCTGTTACGGTAGCCTTTTGTGAGAGCCCGACGAAGCCGCTACTAGA
TACATTGGCGTCGCTGTAGTCGTGGTCGCGGTACCGGTGGTGGTGGTGCC
AGAGCCAGCAAACGTTATCAGGATTCCGCCAGACGAAGTAGGCGGGGGGA
TTTGCCGCACAAGCAAAATTTTGCTGCGCACTGGTCTGACCTGTTAGAGG
AAAGCCCAATGATCTGCTGACATATTTGTCTTGTTTGCGATGTCAGGGCC
GGCAGGCAGGGAGGGAGGCGCGGATATCGACGCCGTTTCGCGATAGTTTA
TATTAGAACCGTTTTAATTACCAGAGTTGTTGACTCCATCTTCGATTTCT
GCGTCTCATGCTTGGATGTTGAAGCGTAACCTGTCTCGGTCTCCGTTCCA
GGGGGGCGCGCAAGCAGGAAATATTTTGGTGGTACACACCGTAAGTGTGT
AGAACAACGAATTGCGACGTGCATGCCAAAGACCCCTTCTCTCGCGTTTC
GCGGTATTTGTGTTCAATAATGTTGTCCCCCGCCCTCTGTACCTTGTCGA
CTGGGTGTTTCGTACGCTCCTCTCGTCTCAAACGTTTGTTTTTTGATGAG
ATAGTCTCGTCTGTCGCATGAGCTTCGCCTGTTGAGTTACTACTGTAGCT
GCCAGCTCCACACAAGAAGTCGCGTACGATCATGTACCGCCCTCCATTGT
TTGGATGCGTGTCTTTACGTACGTGTACCCTGGTATGTGTGACTGTAAGT
CAGAAGCACTCACGCTGCCAGGCGTATGTATCTCGACACTCAAATTGCAA
TGTTACCGTGGTAATGACAAAAAGGGGGATAAACGCCTACAGTTGTGTGC
TGTTCGCATCGTGGT
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Coding sequence (CDS) from alignment at P-littoralis_Contig126:182185..187899+

>mRNA_P-littoralis_Contig126.53.1 ID=mRNA_P-littoralis_Contig126.53.1|Name=mRNA_P-littoralis_Contig126.53.1|organism=Pylaiella littoralis U1_48|type=CDS|length=708bp|location=Sequence derived from alignment at P-littoralis_Contig126:182185..187899+ (Pylaiella littoralis U1_48)
ATGGCGGCCTCTCAGGACGAGCTCAAGAAGCAGGTGGGGTACAAGTCTGT
GGATGACTACGTGACGAGCGGCATGGTCGTCGGCCTGGGCACGGGCTCCA
CCGCAGCCTTCGCCGTGGAGCGCCTTGGGGAGCTGCTGAAAAGCGGCGAG
CTGAAGGACATCGTAGCGATCCCCACGTCCATCCGCACCAAGGAGCAGGC
GGAGTCCCTCGGCATCCCGCTGGTCACGCTGAGCACCCACTCCGTGCTGG
ACGTGGCTATCGACGGCGCGGACGAGGTGGACCCGGACCTTAACCTGGTA
AAGGGCCGAGGCGGAGCGCTGTTGAGGGAGAAGATGGTGGAGGTTTGCGC
CAAGAAGTTCATCGTCATCGTCGACGACTCCAAGTTTGTGCCCGGCCTCG
GCATCTCGGGGGCGATGCCCGTGGAGGTTACCCCCTTCTGCTGGGAGCAC
ACCCTCAACACCGTCAAGAACTTGCCCAGCATTAAGGGCTGCGACGCCAA
GCTCCGTGAGGAGGACGGCAAGCCGTACGTGACGGACAACGACAACTACA
TCGTCGATCTGTACTTCACCGAACCCATCAAGGACGCCACGCAGGCCGGC
AAGGAGATGCTGGAGACCGTGGGTGTGGTGGAGCACGGGCTGTTCCTCGA
CATGTCTTTCGCGGTCATCTCGGCAGGCTCCGACGGCATCACCGTCAAGA
CCAAATAA
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