prot_P-littoralis_Contig126.34.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig126.34.1
Unique Nameprot_P-littoralis_Contig126.34.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length104
Homology
BLAST of mRNA_P-littoralis_Contig126.34.1 vs. uniprot
Match: A0A6H5KFL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL9_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.420e-27
Identity = 55/81 (67.90%), Postives = 62/81 (76.54%), Query Frame = 0
Query:    1 MQQTNVAKLDKHVKGKHGEEKWTREDFLQKRQQLVDGKLLSVDQSFKFAKLVRVRLAGRGSDTKPSHSVVTFFDEFEQAPQ 81
            MQ++  A+LDKHV G  GE KWTREDFLQ+RQQ VDG +L VD SFK AKLVRVR  G  +DTKP H VVT F+EFEQA Q
Sbjct:   75 MQRSRAARLDKHVNGVQGESKWTREDFLQRRQQQVDGTVLKVDASFKLAKLVRVRAPGAAADTKPFHCVVTLFNEFEQATQ 155          
BLAST of mRNA_P-littoralis_Contig126.34.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.400e-8
Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   22 WTREDFLQKRQQLVDGKLLSVDQSFKFAKLVRVRLAGRGSDTKPSHSVVTFFDEFEQ 78
            WTRE++LQ+R QLVDG  L+ D SFK+AK++R+     G+  +P H + T  +E++Q
Sbjct:  245 WTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTIMNEYDQ 301          
BLAST of mRNA_P-littoralis_Contig126.34.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.890e-8
Identity = 28/59 (47.46%), Postives = 42/59 (71.19%), Query Frame = 0
Query:   23 TREDFLQKRQQLVDGKLLSVDQSFKFAKLVRVRLAGRGSDTKPSHSVVTFFDEFEQAPQ 81
            TRED+LQ+  QLVDG +L+ D SFK+AK++R+  AG  + +KP   + T  +E+EQA +
Sbjct:   86 TREDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGESTKSKPIQGIFTILNEYEQAAE 144          
BLAST of mRNA_P-littoralis_Contig126.34.1 vs. uniprot
Match: A0A6H5JCK3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK3_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 2.210e-5
Identity = 22/53 (41.51%), Postives = 38/53 (71.70%), Query Frame = 0
Query:   26 DFLQKRQQLVDGKLLSVDQSFKFAKLVRVRLAGRGSDTKPSHSVVTFFDEFEQ 78
            ++LQ+R QLVDG+LL+ D SFK+AK++R+     G+  +P + + T  +E++Q
Sbjct:   44 NYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGPDGTRARPVYGIFTIMNEYDQ 96          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig126.34.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KFL9_9PHAE1.420e-2767.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIV2_ECTSI1.400e-845.613'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7G3Q9_ECTSI1.890e-847.463'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JCK3_9PHAE2.210e-541.513'-5' exonuclease domain-containing protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig126contigP-littoralis_Contig126:82958..83918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig126.34.1mRNA_P-littoralis_Contig126.34.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig126 81818..84641 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig126.34.1 ID=prot_P-littoralis_Contig126.34.1|Name=mRNA_P-littoralis_Contig126.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=104bp
MQQTNVAKLDKHVKGKHGEEKWTREDFLQKRQQLVDGKLLSVDQSFKFAK
LVRVRLAGRGSDTKPSHSVVTFFDEFEQAPQPRQYGGGHFAVEIQGASGQ
AAP*
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