mRNA_P-littoralis_Contig126.27.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig126.27.1 vs. uniprot
Match: D8LFC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC5_ECTSI) HSP 1 Score: 402 bits (1032), Expect = 6.500e-131 Identity = 210/369 (56.91%), Postives = 252/369 (68.29%), Query Frame = 1
Query: 127 MATTSHPHTPPRQSKRKLNTALDNLGLGVDDEDFATPPGVTRKVRPRTPLGPQSPNAATAPVYV-GTARDLEQSEXXXXXXXXXXXPPASKAKRKKLRSDYRPVEPQYADMTAERLFTEGHVATGSFFLDHMGFAKQAARFNDVKIAGKAVWQKQPIGTSTLHNNIVVAEHFPSLAPLLVPLGELCKPRPSTTRRFKKQRVQQYTKSGRRHRDGKNAEWRMCITVHDPAAPSDFKQLEIGMAEASTAEGGKAVNPFRTKADGTPDSTLFDCSSASYHIMDTVGTGYNSHAHHQAIIAKKSILAKHGAATTFVIDMDPINPDTFIEDVDAIAMGTAGALGPNAGCESALVPPPTPEQIGVSCGSQQTKDW 1230
M T+S+P +P R+ KRK +T LD GLG DD+DF TPPG TRKVRP TP AA +P TA + ++ + P +KK+R DYRPV+PQY MT ERLF+EGH+A GSF +H FA++AA FN VKI GK+VWQ+QP G STLHNN+ + + FPSLAP LVPL LCK R ST R F KQR QQYT SGRRHRDGKN WRMCITVH+P AP FK+LE+G+A+A A+G +A NP++ KADGTPD DC++ SY IMD VGTG SHAHHQAII K L +HGA T FV+D DPI+P TF++DV+ IA GTA + G A VPPPT QIG SCGS QT DW
Sbjct: 1 MTTSSNPRSPLREPKRKRDTDLDFFGLGSDDDDFCTPPGATRKVRPTTPXXXXXXXAAASPCGPKSTASEGKKRKK-----------PTVSTGKKKIRHDYRPVDPQYERMTTERLFSEGHIAMGSFSYNHPQFAEEAAAFNGVKIDGKSVWQQQPCGPSTLHNNVTIIDRFPSLAPFLVPLDNLCKRRDSTVRLFVKQRAQQYTTSGRRHRDGKNGRWRMCITVHNPGAPLGFKRLEVGVADARVAKGDQATNPWQLKADGTPDMECIDCTTGSYQIMDEVGTGTASHAHHQAIIDKNP-LPQHGAPTMFVVDFDPISPHTFVDDVERIAEGTADKVKAGVGVP-AYVPPPTQAQIGRSCGSTQTSDW 356
BLAST of mRNA_P-littoralis_Contig126.27.1 vs. uniprot
Match: A0A6H5L1U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1U0_9PHAE) HSP 1 Score: 328 bits (842), Expect = 3.170e-104 Identity = 164/270 (60.74%), Postives = 202/270 (74.81%), Query Frame = 1
Query: 421 DYRPVEPQYADMTAERLFTEGHVATGSFFLDHMGFAKQAARFNDVKIAGKAVWQKQPIGTSTLHNNIVVAEHFPSLAPLLVPLGELCKPRPSTTRRFKKQRVQQYTKSGRRHRDGKNAEWRMCITVHDPAAPSDFKQLEIGMAEASTAEGGKAVNPFRTKADGTPDSTLFDCSSASYHIMDTVGTGYNSHAHHQAIIAKKSILAKHGAATTFVIDMDPINPDTFIEDVDAIAMGTAGALGPNAGCESALVPPPTPEQIGVSCGSQQTKDW 1230
D P +P++A+MT ERLF+EG++ TG F +H F ++ A+FN VK+ GK WQKQP G STLHNNIVV +HF SLAP L PL +LCKPRPST R F KQRVQQ KSGRRH D KNA WR+C+TV + +AP KQLEIGM +AS A+GG AVNP++ +ADG PD+ FDC + SYH+MDTV TG +SHAHHQA++ K+ IL KHGA TTFV+D+DP+N DTFI+DV IA GTA A+ G ESA VPPPT Q+G S SQ+ +DW
Sbjct: 32 DLPPTDPRHANMTIERLFSEGYIVTGGFSYNHPQFEREMAKFNGVKVNGKPTWQKQPSGPSTLHNNIVVTDHFRSLAPFLGPLAKLCKPRPSTDRLFTKQRVQQSIKSGRRHHDAKNAPWRVCVTVANLSAPKGLKQLEIGMTDASKAKGGGAVNPWQLQADGEPDARRFDCVTGSYHVMDTVATGLDSHAHHQALVNKELIL-KHGALTTFVLDLDPVNLDTFIDDVAEIARGTADAVIDGVG-ESAYVPPPTAAQMGTSSYSQKWRDW 299
BLAST of mRNA_P-littoralis_Contig126.27.1 vs. uniprot
Match: A0A6H5K3Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q8_9PHAE) HSP 1 Score: 324 bits (830), Expect = 2.000e-101 Identity = 178/333 (53.45%), Postives = 211/333 (63.36%), Query Frame = 1
Query: 127 MATTSHPHTPPRQSKRKLNTALDNLGLGVDDEDFATPPGVTRKVRPRTPLGPQSPNAATAPVYVGTARDLEQSEXXXXXXXXXXXPPASKAKRKKLRSDYRPVEPQYADMTAERLFTEGHVATGSFFLDHMGFAKQAARFNDVKIAGKAVWQKQPIGTSTLHNNIVVAEHFPSLAPLLVPLGELCKPRPSTTRRFKKQRVQQYTKSGRRHRDGKNAEWRMCITVHDPAAPSDFKQLEIGMAEASTAEGGKAVNPFRTKADGTPDSTLFDCSSASYHIMDTVGTGYNSHAHHQAIIAKKSILAKHGAATTFVIDMDPINPDTFIEDVDAIAMGT 1125
MAT+S+P TP R+ KRK +T L+ GLG DD+DF TPPGVTR+V TPL P+SPNAAT+ P K K KK R +Y+PV QY MT RLF +GH+A +F +H FAK+A FN V IAGK VWQ+QP G STLHN + + +HF SLAP L PL +LCKPR ST R F KQR QQY SGRRHRDGKN WRMC+TVH+P AP FK+LE+ KADGTPD DC + SYH MD VGTG SHAHHQ II K++L +HGA TTFV+D DPI+P+TFI+DV IA GT
Sbjct: 1 MATSSNPRTPLREPKRKRDTGLEISGLGPDDDDFCTPPGVTRRVANTTPLTPRSPNAATSSCG-----------------------PKGK-KPKKSRHEYKPVPSQYEMMTTARLFGDGHIARSNFSYNHPQFAKEADTFNGVTIAGKQVWQRQPSGPSTLHNKVTIIDHFSSLAPFLGPLEKLCKPRDSTDRLFLKQRAQQYITSGRRHRDGKNGLWRMCVTVHNPGAPPGFKRLEL-------------------KADGTPDMECIDCPAGSYHTMDEVGTGTASHAHHQEII-DKNLLREHGAPTTFVLDFDPIDPNTFIDDVARIAEGT 289
BLAST of mRNA_P-littoralis_Contig126.27.1 vs. uniprot
Match: A0A6H5KU06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU06_9PHAE) HSP 1 Score: 282 bits (721), Expect = 2.780e-87 Identity = 158/283 (55.83%), Postives = 173/283 (61.13%), Query Frame = 1
Query: 382 PPASKAKRKKLRSDYRPVEPQYADMTAERLFTEGHVATGSFFLDHMGFAKQAARFNDVKIAGKAVWQKQPIGTSTLHNNIVVAEHFPSLAPLLVPLGELCKPRPSTTRRFKKQRVQQYTKSGRRHRDGKNAEWRMCITVHDPAAPSDFKQLEIGMAEASTAEGGKAVNPFRTKADGTPDSTLFDCSSASYHIMDTVGTGYNSHAHHQAIIAKKSILAKHGAATTFVIDMDPINPDTFIEDVDAIAMGTAGALGPNAGCESALVPPPTPEQIGVSCGSQQTKDW 1230
P ASK KRKK+R DYR V P+Y +MT ERLF E HVATGSFF+DH FA++ RFNDV I GK VWQK+P G STLHN+I +AEHFPSLAPLL+PL LCKPRP T RRFKKQR QQYTKSGRRHRDGKNAEWRMCITVHDPAA S FK+LEIG+A+AS ++DVDAIAMGTAGAL NAGCESA VPPP PEQIGVS GSQQT DW
Sbjct: 20 PCASKEKRKKIRHDYRSVLPEYEEMTTERLFAECHVATGSFFIDHNRFAQEGERFNDVTIGGKPVWQKKPSGHSTLHNSIAIAEHFPSLAPLLIPLEALCKPRPGTARRFKKQRAQQYTKSGRRHRDGKNAEWRMCITVHDPAALSLFKELEIGVADASK-----------------------------------------------------------------------------VKDVDAIAMGTAGALEANAGCESAPVPPPYPEQIGVSSGSQQTSDW 225
BLAST of mRNA_P-littoralis_Contig126.27.1 vs. uniprot
Match: A0A6H5KI01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI01_9PHAE) HSP 1 Score: 282 bits (722), Expect = 2.260e-86 Identity = 161/350 (46.00%), Postives = 206/350 (58.86%), Query Frame = 1
Query: 178 LNTALDNLGLGVDDEDFATPPGVTRKVRPRTPLGPQSPNAATAPVYVGTARDLEQSEXXXXXXXXXXXPPASKAKR-KKLRSDYRPVEPQYADMTAERLFTEGHVATGSFFLDHMGFAKQAARFNDVKIAGKAVWQKQPIGTSTLHNNIVVAEHFPSLAPLLVPLGELCKPRPSTTRRFKKQRVQQYTKSGRRHRDGKNAEWRMCITVHDPAAPSDFKQLEIGMAEASTAEGGKAVNPFRTKADGTPDSTLFDCSSASYHIMDTVGTGYNSHAHHQAIIAKKSILAKHGAATTFVIDMDPINPDTFIEDVDAIAMGTAGALGPNAGCESALVPPPTPEQIGVSCGSQQTK 1224
++T + + E F TPPGVTR+V TPL P+SPNAA + + + PPASK K+ KK R +Y+PV QY MT RLF++GH+ATG+F +H FAK+A FN V I GK VWQ+QP G STLHNN+ + +HF SLAP L PL +LCK R ST R F KQR QQY SGRRHRDG+N WRMC+TVH+P AP FK+LE+G+A+A A+GG A+NP++ KAD ++L +HGA TFV+D DPI+P+TFI+DV IA GTA + G SA V P T EQIG SC S++ +
Sbjct: 2 IHTLPTHASVRDPTEFFCTPPGVTRRVANATPLTPRSPNAAASSCGPKPLKSKGEKRKT---------PPASKGKKPKKARHEYKPVPSQYEVMTTARLFSDGHIATGNFSYNHPQFAKEADAFNGVTIGGKRVWQRQPSGPSTLHNNVTIIDHFSSLAPFLGPLEKLCKLRDSTDRLFLKQRAQQYITSGRRHRDGRNGLWRMCVTVHNPGAPPGFKRLEVGVADARVAKGGDAINPWQLKAD--------------------------------------NLLREHGAPATFVLDFDPIDPNTFIDDVARIAEGTADKVKAGVGV-SAYVCPRTEEQIGKSCASEKMR 303
BLAST of mRNA_P-littoralis_Contig126.27.1 vs. uniprot
Match: A0A6H5KRD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD3_9PHAE) HSP 1 Score: 274 bits (701), Expect = 7.200e-84 Identity = 153/282 (54.26%), Postives = 176/282 (62.41%), Query Frame = 1
Query: 385 PASKAKRKKLRSDYRPVEPQYADMTAERLFTEGHVATGSFFLDHMGFAKQAARFNDVKIAGKAVWQKQPIGTSTLHNNIVVAEHFPSLAPLLVPLGELCKPRPSTTRRFKKQRVQQYTKSGRRHRDGKNAEWRMCITVHDPAAPSDFKQLEIGMAEASTAEGGKAVNPFRTKADGTPDSTLFDCSSASYHIMDTVGTGYNSHAHHQAIIAKKSILAKHGAATTFVIDMDPINPDTFIEDVDAIAMGTAGALGPNAGCESALVPPPTPEQIGVSCGSQQTKDW 1230
P + KRKK+R DYR V P+Y DMT ERL EGHVATGSFF+DH FA++A + N V I GK G++ T+ G+ G W MCIT+HDPAAPS+FKQLEIG + S A+GG A+NPFR K DGT D+T FDC S SYHIMD VGTG + HAHHQA I K+ +L HGAATTFV DM+PINPDTFI+DVD IA GTAGALGPNAGCESA VPPPT EQIGVS G +QT DW
Sbjct: 32 PCASKKRKKIRHDYRSVLPEYEDMTTERLVAEGHVATGSFFIDHNHFAQEAEKSNVVTIGGKR--------------------------------GDV-------------------TEMGKTRSGG----W-MCITIHDPAAPSNFKQLEIGEVDGSKAKGGHAINPFRAKPDGTTDATTFDCPSPSYHIMDRVGTGLHFHAHHQAKIDKR-LLDVHGAATTFVDDMNPINPDTFIQDVDVIARGTAGALGPNAGCESAPVPPPTDEQIGVSSGPEQTSDW 256
BLAST of mRNA_P-littoralis_Contig126.27.1 vs. uniprot
Match: A0A6H5K5U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5U5_9PHAE) HSP 1 Score: 276 bits (706), Expect = 3.700e-82 Identity = 160/313 (51.12%), Postives = 193/313 (61.66%), Query Frame = 1
Query: 454 MTAERLFTEGHVATGSFFLDHMGFAKQAARFNDVKIAGKAVWQKQPIGTSTLHNNIVVAEHFPSLAPLLVPLGELCKPRPSTTRRFKKQRVQQYTKSGRRHRDGKNAEWRMCITVHDPAAPSDFKQLEIGMAEASTAEGGKAVNPFRTKADGTPDSTLFDCSSASYHIMDTVGTGYNSHAHHQAIIAKKSILAKHGAATTFVIDMDPINPDTFIEDVDAIAMGTAGALGPNAGCESALVPPPTPEQIGVSCGSQQTKDWTVAGAMAREEAAKEAXXXXXXXXXXXXXKDNLDDATKKRKLTVKARDDQSTGAR 1392
MT ERLF+EGH+A GSF +H FA++AA FN VK+ K V Q QP STLH +IV+A++F SL P L LCKPRP T R HRDGKN WRMCIT HDPAAP K+ E+G+A+AS A+GG A+ P + K D PDS FDC++ SYHIMD VGTG NSHAHHQAII KS+L+ H A TTFVID+DPI+P TF++DV+ IA GT+ + G A VP PT QIG S TVAGA ARE AA K L+DA K+R++T KAR DQ G +
Sbjct: 1 MTTERLFSEGHIAIGSFAYNHPQFAEEAAAFNTVKVNRKPVRQTQPSSPSTLHKSIVIADYFSSLTPFSKQLEGLCKPRPKTNRL---------------HRDGKNGPWRMCITAHDPAAPPHTKRSEVGVADASNAKGGGALYPRQLKDDRKPDSVRFDCAAGSYHIMDKVGTGTNSHAHHQAII-DKSVLSTHEALTTFVIDLDPISPHTFVDDVENIAKGTSIEVKAGVGVP-AYVPTPTQAQIGRSRE-------TVAGAKAREAAASAIFDAAVADEEAAEAKQKLEDAAKRRRVTEKARADQVKGGK 289
BLAST of mRNA_P-littoralis_Contig126.27.1 vs. uniprot
Match: A0A6H5J6K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K4_9PHAE) HSP 1 Score: 251 bits (642), Expect = 5.030e-76 Identity = 121/184 (65.76%), Postives = 142/184 (77.17%), Query Frame = 1
Query: 454 MTAERLFTEGHVATGSFFLDHMGFAKQAARFNDVKIAGKAVWQKQPIGTSTLHNNIVVAEHFPSLAPLLVPLGE-LCKPRPSTTRRFKKQRVQQYTKSGRRHRDGKNAEWRMCITVHDPAAPSDFKQLEIGMAEASTAEGGKAVNPFRTKADGTPDSTLFDCSSASYHIMDTVGTGYNSHAHHQ 1002
MT R+F EGH+ATGSF +H F K+AA FND+K+ GK VWQKQP G STLHN++V+ + FPSLAP L P+ + LCKPRP+T R F KQR QQYT SGRRHRDGKN WRMC+T+HDPAAP KQLEIG+A+ S A+G AVNPF+TKADGTPDS FDC S SYH+MD V TG SHA H+
Sbjct: 1 MTTARIFNEGHIATGSFSYNHPLFEKEAAAFNDIKVDGKPVWQKQPPGPSTLHNSVVINDRFPSLAPFLGPVEKKLCKPRPTTDRLFLKQRAQQYTTSGRRHRDGKNGPWRMCVTIHDPAAPPHAKQLEIGLADGSKAKGDGAVNPFQTKADGTPDSRRFDCPSGSYHLMDEVATGTVSHASHK 184
BLAST of mRNA_P-littoralis_Contig126.27.1 vs. uniprot
Match: D7G8P5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8P5_ECTSI) HSP 1 Score: 209 bits (533), Expect = 2.440e-56 Identity = 107/158 (67.72%), Postives = 119/158 (75.32%), Query Frame = 1
Query: 1504 SRGAFNSGPGFNGVGKPFNSGVGAAARDFGDEGAGKKYYGLHLDIPTKYLAAQLPFLV*PDGGLKDPPLCVTKVNPHHPGLTKGQGIFGLDREGALIMGVHSGHRLNVCTRGGTVPVTAASPPYAVXXXXXXXLRAGKTVSNKTYHVRESARAKLNEE 1977
S+ A NSGPG+ VGKPFNSG GA ARDF EGA K+YGLHLDIPT+ LAA+L LV PDG LKD PLC T+VNP HPGLTKG+ FGLDREGALIMGVH+G LN C GGT+PVT A+PPY V L AGK VSNKT++ RE RAKLNEE
Sbjct: 379 SQKALNSGPGYGAVGKPFNSGNGATARDFSAEGANDKWYGLHLDIPTRDLAAKLRLLVQPDGSLKDAPLCDTEVNPDHPGLTKGRSTFGLDREGALIMGVHNGQSLNRCVGGGTIPVTTAAPPYRVPHFAIAPLLAGKIVSNKTHNKRERTRAKLNEE 536
BLAST of mRNA_P-littoralis_Contig126.27.1 vs. uniprot
Match: A0A6H5K7M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M5_9PHAE) HSP 1 Score: 165 bits (417), Expect = 1.730e-41 Identity = 90/193 (46.63%), Postives = 110/193 (56.99%), Query Frame = 1
Query: 433 VEPQYADMTAERLFTEGHVATGSFFLDHMGFAKQAARFNDVKIAGKAVWQKQPIGTSTLHNNIVVAEHFPSLAPLLVPLGELCKPRPSTTRRFKKQRVQQYTKSGRRHRDGKNAEWRMCITVHDPAAPSDFKQLEIGMAEASTAEGGKAVNPFRTKADGTPDSTLFDCSSASYHIMDTVGTGYNSHAHHQAII 1011
V P+Y +MT ERLF EGHVATGSFF+DH FA++A +FNDV I GK +T+ R++ NAEWRM IT+HDPAAPS+F QLEIG+ + S A+GG A+NPFR K DG+ D+T FDC S SYHIMD VGTG++SHAHHQA I
Sbjct: 28 VLPEYEEMTTERLFAEGHVATGSFFIDHNRFAQEAEKFNDVTIGGKR----------------------------------------ATSPRWE------------------NAEWRMFITIHDPAAPSNFIQLEIGVVDGSKAKGGHAINPFRAKPDGSTDATTFDCPSPSYHIMDRVGTGHHSHAHHQAKI 162 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig126.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig126.27.1 >prot_P-littoralis_Contig126.27.1 ID=prot_P-littoralis_Contig126.27.1|Name=mRNA_P-littoralis_Contig126.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=518bp MATTSHPHTPPRQSKRKLNTALDNLGLGVDDEDFATPPGVTRKVRPRTPLback to top mRNA from alignment at P-littoralis_Contig126:64857..69092+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig126.27.1 ID=mRNA_P-littoralis_Contig126.27.1|Name=mRNA_P-littoralis_Contig126.27.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4236bp|location=Sequence derived from alignment at P-littoralis_Contig126:64857..69092+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig126:64857..69092+ >mRNA_P-littoralis_Contig126.27.1 ID=mRNA_P-littoralis_Contig126.27.1|Name=mRNA_P-littoralis_Contig126.27.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1554bp|location=Sequence derived from alignment at P-littoralis_Contig126:64857..69092+ (Pylaiella littoralis U1_48)back to top |