mRNA_P-littoralis_Contig126.16.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig126.16.1 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE) HSP 1 Score: 330 bits (846), Expect = 5.430e-99 Identity = 208/518 (40.15%), Postives = 279/518 (53.86%), Query Frame = 3
Query: 624 GAVFQPANKNVTDFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLYQLRLEGRTVVFDREGSWYRFSDEGSVVGELSSLKTAGFFDDDNTWYLSDPKFRPEKFLNLPTVVFVSPKIGRTEEFLKMDMSEEFCMAPWGEDELMECRRLIFPEISEHEVQRRFDIVGGVARVVFGKVDFERYTQAMIDKAKRESVKSLPLLVANAGSDF---SNQDWGDKLLHLKPWPPSCSVSNVKNVTFASDFAAEVVGHALDAQGTRILPAIMASGFQDENTKRLVTGSVRGQLFEHFAHKEIAGSTDGGGTDGRTFGMKIFGNNSTRTKSTFQ-------FSEREAFKGTRIPGMLRPGVYYKPRNQNFPAIDGLGIDKGGDTLFFFQMKVADA------EGVNGTYVETYWETA-LESKGPSPKNFVFLYVVPSGSLSVWEKATKEVKALG--------VLEGLSKKSKSACKVGVME 2102
G + K + DFGA LT A + +NTL LA+GTFFLG+ RSK+F+R CY + +LI + DGT KIV+ GTPGIGKS FGF+L+Y LR +G TVV +R+ SW+RFSDEG VG S + AG+ ++TWYLSDP+ RP++ L LPTVV +SP+ R EF+K S F M PW DEL CR+ +FP + E +V+ RF VGGVAR VF ++ M A + L +++ + D S GD LLHL P P + +V FAS+FA V L + L + + + F + VT R FE AHK I GG ++ + F M+I S+ TKS + F + ++F+G P L G YY+P + NF A D G+D G TL+FFQ+K A + V T+VE YW A L P K FV+ +VVP G VW KAT+ + G V +G KSAC V V+E
Sbjct: 30 GCLLVAVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVT---DGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKDSWFRFSDEGVTVGYFYSFRRAGYLYGNSTWYLSDPEDRPKELLGLPTVVLLSPRKSRVNEFMKQPGSRRFYMPPWCLDELFRCRQAVFPHVPETDVRERFSKVGGVARAVFDAEKLKQVCLKMQAAASNMDLNLLQQILSRSRDDVDQVSTDRSGDALLHLLPIPETGFEEF--SVDFASEFAHIVTLGELPKKEFAPLASFVGAAFAHDELGDKVTAE-RAAGFETIAHKTI-----GGASEQQWFDMRILSRASSSTKSVLEGNRLRLSFVKEQSFEGNSFPDALVAGTYYRPGSPNFAAADSFGVDSGSKTLWFFQVKSAGLPPKEGEKAVKWTHVEKYWRRAKLHHGAPIKKRFVYAFVVPEGK--VWNKATETCEEDGGRGDWRRNVTDGF----KSACDVCVIE 530
BLAST of mRNA_P-littoralis_Contig126.16.1 vs. uniprot
Match: D7FM56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM56_ECTSI) HSP 1 Score: 207 bits (528), Expect = 3.810e-58 Identity = 139/156 (89.10%), Postives = 142/156 (91.03%), Query Frame = 3
Query: 3 SVLLLVCIAQACLAFVPSWTATFRSSRSQPPASTPAATTFSLSQPSGAICPVFGVCGTCGAQIFYPVRGMTSLSAMSEGDEEEGGGDHHAREAADGSPAADEIREVQXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAIAGGSGYLGMTDPEALFRE 470
SVLLLV IAQACLAFVPSWTATFRSSRSQPPASTPAA TFSLSQPSG ICPVFG C TCGAQ FYPV GMTSLSAMSEG EEEGGGDHHAREAADGSPAADEIR VQXXXXXXXXXXXXXXXXXXXXXXX +EAAIAGGS YLGMTDPEAL ++
Sbjct: 7 SVLLLVGIAQACLAFVPSWTATFRSSRSQPPASTPAAATFSLSQPSGPICPVFGACDTCGAQFFYPVPGMTSLSAMSEGGEEEGGGDHHAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXXTDGIEAAIAGGSRYLGMTDPEALLKQ 162
BLAST of mRNA_P-littoralis_Contig126.16.1 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI) HSP 1 Score: 201 bits (511), Expect = 1.740e-55 Identity = 142/234 (60.68%), Postives = 155/234 (66.24%), Query Frame = 3
Query: 210 MTSLSAMSEGDEEEGGGDHHAREAADGSPAADEIREVQXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAIAGGSGYLGMTDPEALFREEXXXXXXXXXXXXXXXXXXXXXXXXRELLV---FFKKEDRLSRIEQLRANNAPAGAVFQPANKNVTDFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLY 902
MTSLSAMSEGDEEEGGGDH AREAAD PAADEIR VQ X +EAAIAGGS YLGMTDPEAL ++ XXXXXXXXXXXXXXXRELL+ KKEDR SRIEQLRANNAPA ANKNV+DF AALTGA +TE+TL LANGTFFLG S SK+F+RHCY E LI Q +V+ GTPGIGKS FG++LLY
Sbjct: 1 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKXEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQ---LGRKEEQXXXXXXXXXXXXXXXRELLLNELLLKKEDRFSRIEQLRANNAPA------ANKNVSDFAAALTGAVVTEDTLELANGTFFLGNSDLGSKLFIRHCYKEMADLILSGKVQ-------DVVVTGTPGIGKSTFGYYLLY 218
BLAST of mRNA_P-littoralis_Contig126.16.1 vs. uniprot
Match: A0A6H5K1J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J0_9PHAE) HSP 1 Score: 186 bits (472), Expect = 1.690e-49 Identity = 103/132 (78.03%), Postives = 108/132 (81.82%), Query Frame = 3
Query: 633 FQPANKNVT-DFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLYQLRLEGRTVVFDREGSWYRFS---DEGSVVGELSSLKTAGF 1016
FQ A V+ DFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGT GIGKSVFGFFLLYQLRLEGRTVVF+RE FS D + +L K A +
Sbjct: 51 FQRAKIEVSCDFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTSGIGKSVFGFFLLYQLRLEGRTVVFERETVPRAFSFEHDSSTFKPQLIQKKKAEY 182
BLAST of mRNA_P-littoralis_Contig126.16.1 vs. uniprot
Match: A0A835Z6Q5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q5_9STRA) HSP 1 Score: 162 bits (409), Expect = 2.240e-38 Identity = 140/456 (30.70%), Postives = 211/456 (46.27%), Query Frame = 3
Query: 651 NVTDFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLYQLRLEGRTVVFDREGSWYRFSDE-GSVVGELSSLKTAGFFDDDNTWYLSDPKFRPEKFLNL--PTVVFVSPKIGRTEEFLKMDMSEEFCMAPWGEDELMECRRLIFPEISEHEVQRRFDIVGGVARVVFGKVDFERYTQAMIDKAKRE-SVKSLPLLVANAGSDF-SNQDWGDKLLHLKPWPPSCSVSNVK-NVTFASDFAAEVVGHALDAQGTRILPAIMASGFQDENTKRLVT-GSVRGQLFEHFAHKEIAGSTDGGGTDGRTFGMKIFGNNSTRTKSTFQFSEREAFKGTRIPGMLR--PGVYYKPRNQNFPAIDGLGIDKGGDTLFFFQMKVADAEGVNGTYVETYWETALESKGPSPKNFVFLYVVP 1991
+V F AL+ A+ ++ L L +GT+F+G ++I++R CY E I+ A GT ++VI GTPGIGKS + + L+ LR G TVV+ +YRFS E + + K AG + W+L DP E + T+VFVSP R + FLK + M W ++E+ CR+L+F + + VQ + GGV R V D + QA + +A R+ + L + NAG D S DK+LH+ C+ V + +AS +A + + A L A +AS + RL + ++RG +FE + H+ + +G F ++ + +TF F+ R + R+ + R GVYY PR N A D I G LF FQ+ VA GV E A + FV +VVP
Sbjct: 82 SVVTFWRALSRASDDDDCLALKDGTWFMGDYVRGNRIYIRSCYRELMDTIK---AMVTSGTR-RVVITGTPGIGKSCYALYWLWHLRRAGNTVVYQIGADFYRFSGELVQHADTIGAFKNAGGLWHPDVWFLCDPARDHEPYGGCLGVTLVFVSPSTERYKAFLKEPRATTRYMPVWSQEEVQRCRQLLFDHVPQSRVQDLLEQWGGVPRFVLQFADDDTQ-QAKLQQAIRKCATAGLRATILNAGEDAGSTAALSDKVLHM------CTADFVHVRLMWASQYAFDALCEAQGEASKGELRAFIAS------SARLPSLATLRGLVFEPYVHRLLG--------NGSCFEYRVL-EPAQHGVTTFNFAFRRSVTFARLRDIWRIEEGVYYAPRASNLSAGDSFAIIDG--VLFIFQITVAAEHGVKKAGTLDIVEAACGMSIGARPEFVLAFVVP 509
BLAST of mRNA_P-littoralis_Contig126.16.1 vs. uniprot
Match: A0A6H5KCR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR9_9PHAE) HSP 1 Score: 128 bits (321), Expect = 7.200e-31 Identity = 64/117 (54.70%), Postives = 82/117 (70.09%), Query Frame = 3
Query: 648 KNVTDFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLYQLRLEGRTVVFDREGSWYRFSDEGSVVGELSS 998
K + DFGA LT A + +NTL LA+GTFFLG+ RSK+F+R CY + +LI + DGT KIV+ GTPGIGKS FGF+L+Y LR +G TVV +R+G W+RFSD G VG+ S
Sbjct: 19 KALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVT---DGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKGCWFRFSDGGVTVGDFYS 132
BLAST of mRNA_P-littoralis_Contig126.16.1 vs. uniprot
Match: A0A836CG71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG71_9STRA) HSP 1 Score: 134 bits (336), Expect = 2.640e-28 Identity = 131/477 (27.46%), Postives = 201/477 (42.14%), Query Frame = 3
Query: 636 QPANKNVTDFGAALTGAALTENT-LTLANGTFFLGKSACRSK-IFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLYQLRLEGRTVVFDREGSWYRFSDEGSVVGELSSLKTAGFFDDDNTWYLSDPKF---RPEKFLNLPTVVFVSPKIGRTEEFLKMDMSEEFCMAPWGEDELMECRRLIFPEISEHEVQRRFDIVGGVARVV--FGKVDFERYTQAMIDKAKRESVKSLPLLVANAGSDFSNQDWGDKLLHLKPWPPS-CSVSNVKNVTFASDFAAEVVGHALDAQGTRILPAIMASGFQDENTKRLVTGSVRGQLFEHFAHKEIAGSTDGGGTDGRTFGMKIFGNNSTRTKSTFQFSEREAFKGTRIPGM------------LRPGVYYKPRNQNFPAIDGLGIDKGGDTLFFFQMK-----VADAEGVNGTYVETYWETALESKGPSPKNFVFLYVVP 1991
+PA V +F L A E+ L L GT F G R K I+VR Y + + + S + KI+I G PG GKS+F + L+ L+L G+TV++ +YRFS + G GFFDD + WYLSDP P T+ F+SPK R EFLK ++ M PW EL CR+ +FP +S +V+R + GG R V + + F++ A + + + + S D D++L + P S C+V FA + E +G L A + G G+ G + E AH + G ++ + ++ K+ +R+ +P +RPGVY+ P ++NF AID + G TL+ FQ+ +A A+GV + +L K +V ++VVP
Sbjct: 196 EPAPMEVQEFWRCLVDAREDEHGFLRLTEGTHFPGNKNQRVKAIYVRQWYKDLQEEVL-SMTEPGPQHARKILITGRPGTGKSLFALYWLWLLKLAGKTVIYQANKWFYRFSGDTVWRGSERHFADMGFFDDPDCWYLSDPPAPAGTPWLDCEGITLAFMSPKKWRYNEFLKAPLATGVYMTPWTLSELQHCRQHLFPNLSVKQVRRLYIRWGGSPRYVLQYARNAFQQNKLQRSIVAATQPNRLAAVFASQGESSGDVDDVSDQVLEIVPTSFSTCTVRFTSPYVFAEIYKKEQQVLRQCVRGW--LAAALGGGS---------IGTTPGNMLEQLAHNVLC--------QGGSYKYVV-----SKFKAVVSKGKRKRNLNLHLPPTRPNLFEHLAELTVRPGVYFWPLSKNFKAIDSFVVIDG--TLYMFQITTDLTHIAGAKGVTDVVNKVRESCSL-------KRWVLVFVVP 638
BLAST of mRNA_P-littoralis_Contig126.16.1 vs. uniprot
Match: D8LPP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI) HSP 1 Score: 117 bits (294), Expect = 7.380e-27 Identity = 100/152 (65.79%), Postives = 106/152 (69.74%), Query Frame = 3
Query: 189 IFYPVRGMTSLSAMSEGDEEEGGGDHHAREAADGSPAADEIREVQXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAIAGGSGYLGMTDPEALFRE-------EXXXXXXXXXXXXXXXXXXXXXXXXRELLVFFKKEDRLSRIEQLRANNAPA 623
+FYPVRGMT LSAMSEGDEEEGGGDHHAREAAD PAADEIR VQ +EAAIAGG+ YLGMTDPEAL ++ XXXXXXXXXXXXXXXXXXXXXXXX ELL+ K EDRLSR EQ RANNAPA
Sbjct: 1 MFYPVRGMTGLSAMSEGDEEEGGGDHHAREAADRLPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGARYLGMTDPEALLKQLEQLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXELLL--KTEDRLSRSEQFRANNAPA 150
BLAST of mRNA_P-littoralis_Contig126.16.1 vs. uniprot
Match: A0A372Q6T8_9GLOM (Crinkler domain-containing protein n=1 Tax=Rhizophagus sp. MUCL 43196 TaxID=1803374 RepID=A0A372Q6T8_9GLOM) HSP 1 Score: 123 bits (308), Expect = 3.870e-25 Identity = 105/404 (25.99%), Postives = 181/404 (44.80%), Query Frame = 3
Query: 705 LTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLYQLRLEGRTVVFDREGSWYR--FSDEGSVVGE-LSSLKTAGFFDDDNTWYLSDPKFRPEKFLNLPTVVFVSPKIGRTEEFLKMDMSEEFCMAPWGEDELMECRRLIFPEISEHEVQRRFDIVGGVARVVFGK---------------------VDFERYTQAMIDKAKRESVKSLPLLV-ANAGSDF--SNQDWGDKLLHLKPWPPSCSVSNVKNVTFASDFAAEVVGHALDAQGTRILPAIMASGFQDENTKRLVTGSVRGQLFEHFAHKEIAGSTDGGGTDGRTFGMKIFGNNSTRTKSTFQFSEREAFKGTRIPGMLRPGVYYKPRNQNFPAIDGL 1835
L L G FLG+ S +F+R CY ++ N+ + ++I G PGIGK+ FG++LLY L +TV++D + + F E + E L++ + F + N WY+ D K P+K T++ SPK +EF K +S M W E+ +C+ ++ + + V+ FD GG+ R V K +D+ T+A K + + PL+V N ++ ++ D G+ + +++ PP K + FAS++ AE V L+ + L + S + + SV G+ FE AH+ + G G TF ++ + R +T F++++ + G YY+P N N+P+ID +
Sbjct: 169 LELPKGVHFLGEINEPSTLFIRSCYRHLLDIVLD-----NNSSVRNLIITGNPGIGKTYFGYYLLYNLIQRNQTVMYDSHSTGHVIVFDQEAFYLYEVLNADQIRAFLSNANNWYIVDGK-EPQK-ATAKTILVCSPKKAIFKEFEKFQLSSTRYMPVWSYAEISKCKDKLYNHLQNNLVKTLFDKWGGIPRFVLEKATDYSHQCKLQEAIDACDFDILDYVGATEAKDTSHKLIHIVTNPLVVDVNIVNEQEQTDVDGGNDVEYIEEDPPYSQ----KIIKFASEYVAERVIMRLELRNRGKLRRDLFSSLSEGTSN-----SVLGRYFEEIAHQLLRG--------GGTFDIRSL-ESGGRPTTTKPFTKQDKIYTFSDVNGITDGCYYRPDNPNYPSIDSI 547
BLAST of mRNA_P-littoralis_Contig126.16.1 vs. uniprot
Match: D7G515_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G515_ECTSI) HSP 1 Score: 112 bits (279), Expect = 5.910e-25 Identity = 105/148 (70.95%), Postives = 109/148 (73.65%), Query Frame = 3
Query: 210 MTSLSAMSEGDEEEGGGDHHAREAADGSPAADEIREVQXXXXXXXXXXXXXXXXXXXXXXXXXXV-------EAAIAGGSGYLGMTDPEALFREEXXXXXXXXXXXXXXXXXXXXXXXXRELLVFFKKEDRLSRIEQLRANNAPAGAV 632
MTS SAMSEGDEEEGGGDH AREAADGSPAADEIR VQXXXXXXXXXXXXXXXXXXX V EAAIAGGS YLGMTDPEAL ++ XXXXXXXXXX +L+ KKEDRLSRIEQLRANNAPAG V
Sbjct: 1 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXAEEETAEVVKKIDYIEAAIAGGSKYLGMTDPEALLKQLGRKEEQLRRKEGKEXXXXXXXXXXXXILL--KKEDRLSRIEQLRANNAPAGVV 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig126.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig126.16.1 >prot_P-littoralis_Contig126.16.1 ID=prot_P-littoralis_Contig126.16.1|Name=mRNA_P-littoralis_Contig126.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=635bp MTSLSAMSEGDEEEGGGDHHAREAADGSPAADEIREVQDEIHGVERKIEDback to top mRNA from alignment at P-littoralis_Contig126:36172..44310- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig126.16.1 ID=mRNA_P-littoralis_Contig126.16.1|Name=mRNA_P-littoralis_Contig126.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8139bp|location=Sequence derived from alignment at P-littoralis_Contig126:36172..44310- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig126:36172..44310- >mRNA_P-littoralis_Contig126.16.1 ID=mRNA_P-littoralis_Contig126.16.1|Name=mRNA_P-littoralis_Contig126.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1905bp|location=Sequence derived from alignment at P-littoralis_Contig126:36172..44310- (Pylaiella littoralis U1_48)back to top |