prot_P-littoralis_Contig1254.9.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1254.9.2
Unique Nameprot_P-littoralis_Contig1254.9.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length202
Homology
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BLAST of mRNA_P-littoralis_Contig1254.9.2 vs. uniprot
Match: A0A6H5KDQ3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ3_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 7.790e-26
Identity = 72/181 (39.78%), Postives = 100/181 (55.25%), Query Frame = 0 
Query:    5 CPVIAQLHPGSVRNRTRAGESKLPADPEVTEQHPSGEDDDLDVSPASLPGMKAMTTDGLLEHLASLGIPAASQLQEVCAEQRE---LTGGLRNGIRAARVHARTNEGRQVYQTVLAAAARDGDG---PSRLTARHKAELLGVDPNLMEDAKQRAESLWTDVRPAAAMGEDKYWFHPRSKRT 179
            CPVIA +       RTR+  +  PA       +P  + D  D S + L  M++M    LL+ LA  G+ AA  L++  A+ R+   +  G +  + AA    RTNEGR+ +QT+L AAA DGD    PSR+T++ KAELLGV P     A +R   L +D+ P  A+GE  YWF PR KR+
Sbjct:  110 CPVIAAIQGSHEGLRTRSSATTNPA-----ANNPEPQPDWRDSSESFLAAMRSMAEGELLDFLAGQGVAAADLLRKEQADARDARKMVAGTKKALAAASTQGRTNEGRRTFQTILTAAAFDGDDGDEPSRVTSKRKAELLGVHPEHFVSANKRVARLRSDLAPEEALGEGAYWFQPRGKRS 285
[Close]
BLAST of mRNA_P-littoralis_Contig1254.9.2 vs. uniprot
Match: A0A6H5J8X6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8X6_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.430e-24
Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = 0 
Query:   55 MKAMTTDGLLEHLASLGIPAASQLQEVCAEQRE---LTGGLRNGIRAARVHARTNEGRQVYQTVLAAAARDGDG---PSRLTARHKAELLGVDPNLMEDAKQRAESLWTDVRPAAAMGEDKYWFHPRSKRT 179
            M++M    LL+ LA  G+ AA  L++  A+ R+   +  G +  + AA    RTNEGR+ +QT+L AAA DGD    PSR+T++ KAELLGV P     A +R   L +D+ P  A+GE  YWF PR KR+
Sbjct:    1 MRSMAEGELLDFLAGQGVAAADLLRKEQADARDARKMVAGTKKALAAASTQGRTNEGRRTFQTILTAAAFDGDDGDEPSRVTSKRKAELLGVHPEHFVSANKRVARLRSDLAPEEALGEGAYWFQPRGKRS 131
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1254.9.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KDQ3_9PHAE7.790e-2639.78Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5J8X6_9PHAE2.430e-2443.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1254contigP-littoralis_Contig1254:35985..37036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1254.9.2mRNA_P-littoralis_Contig1254.9.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig1254 35603..37458 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1254.9.2 ID=prot_P-littoralis_Contig1254.9.2|Name=mRNA_P-littoralis_Contig1254.9.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=202bp
MRVICPVIAQLHPGSVRNRTRAGESKLPADPEVTEQHPSGEDDDLDVSPA
SLPGMKAMTTDGLLEHLASLGIPAASQLQEVCAEQRELTGGLRNGIRAAR
VHARTNEGRQVYQTVLAAAARDGDGPSRLTARHKAELLGVDPNLMEDAKQ
RAESLWTDVRPAAAMGEDKYWFHPRSKRTSLKRKRRGASLIRRAGPTEWL
V*
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