prot_P-littoralis_Contig1254.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1254.7.1
Unique Nameprot_P-littoralis_Contig1254.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length144
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1254.7.1 vs. uniprot
Match: A0A6H5JPK1_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK1_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 5.200e-45
Identity = 85/148 (57.43%), Postives = 108/148 (72.97%), Query Frame = 0 
Query:    1 METLFDATMTFLRIGIESEDGLTRLGFVQQRLQRGTDSVRDHCQQHRSKMEDPSTFKMMAEMVNEGIGQWTSVGFTRAVSFQKQHPTPPEIKHMPLVIGPQWAVIGDYIV-----NVVLPSTHSLMSPTKRPGLRKSPATGDNRCFVE 143
            METL  A M  L++GI SEDG TRL  ++Q+LQ G + VR HC+QHRSKM D +TFK+MA+MV+E +G WTS  FTRA++F+KQ+PTPP I+ MP V+GPQW V G++I      N+V+ S HSLMSPTKRP    S   GD RCF+E
Sbjct:  169 METLVYAIMKVLKVGIGSEDGQTRLELLRQQLQEGVEMVRAHCRQHRSKMHDAATFKVMADMVDEDLGNWTSTWFTRALAFRKQYPTPPHIESMPPVVGPQWNVTGNFIASGGLRNIVIRSHHSLMSPTKRPRPGNS---GDRRCFME 313
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1254.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JPK1_9PHAE5.200e-4557.43Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1254contigP-littoralis_Contig1254:29344..30031 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1254.7.1mRNA_P-littoralis_Contig1254.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1254 29127..35411 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1254.7.1 ID=prot_P-littoralis_Contig1254.7.1|Name=mRNA_P-littoralis_Contig1254.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=144bp
METLFDATMTFLRIGIESEDGLTRLGFVQQRLQRGTDSVRDHCQQHRSKM
EDPSTFKMMAEMVNEGIGQWTSVGFTRAVSFQKQHPTPPEIKHMPLVIGP
QWAVIGDYIVNVVLPSTHSLMSPTKRPGLRKSPATGDNRCFVE*
back to top