prot_P-littoralis_Contig1254.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1254.6.1
Unique Nameprot_P-littoralis_Contig1254.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length115
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1254.6.1 vs. uniprot
Match: A0A6H5KCI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI7_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 6.100e-39
Identity = 78/129 (60.47%), Postives = 89/129 (68.99%), Query Frame = 0 
Query:    1 MAELMSCHATLPEDAPLSSCRSGREVKVLKYGQALQAFRGIVKKSGRDPKDFALHSLPIGG----------------------SDSYKPYTVSNMEDSRRVSHTPGDKDKGVARQPGESTMWRSSNNRR 107
            M   +SCHATLP+ APLSS RSG+EVKVLKY QAL+A R IV++SGR+PKDFALHSL IGG                      SD+YK YTV+N EDS+RVS T GDKDKGVARQPGE+TMW     RR
Sbjct:  335 MVASLSCHATLPDSAPLSSYRSGQEVKVLKYDQALRALREIVERSGRNPKDFALHSLRIGGASTLAAGGAVSERVIQREGRWKSDAYKVYTVNNSEDSQRVSRTLGDKDKGVARQPGENTMWGGQKRRR 463
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1254.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KCI7_9PHAE6.100e-3960.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1254contigP-littoralis_Contig1254:25824..26241 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1254.6.1mRNA_P-littoralis_Contig1254.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1254 24681..26454 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1254.6.1 ID=prot_P-littoralis_Contig1254.6.1|Name=mRNA_P-littoralis_Contig1254.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=115bp
MAELMSCHATLPEDAPLSSCRSGREVKVLKYGQALQAFRGIVKKSGRDPK
DFALHSLPIGGSDSYKPYTVSNMEDSRRVSHTPGDKDKGVARQPGESTMW
RSSNNRRAALHYRK*
back to top