prot_P-littoralis_Contig1251.5.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1251.5.1
Unique Nameprot_P-littoralis_Contig1251.5.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length319
Homology
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BLAST of mRNA_P-littoralis_Contig1251.5.1 vs. uniprot
Match: A0A6H5JGE4_9PHAE (Centrosomal protein of 44 kDa n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGE4_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 5.060e-33
Identity = 123/323 (38.08%), Postives = 152/323 (47.06%), Query Frame = 0 
Query:   30 ISHGSLAGA-PLPTLARSPLGARVVQGPLQRHQQXXXXRSLSAMDLEHLPPISLGRGDSGSGSSGLLPPPLRV--SPAPPGLGGANGSGGESDWLAVQQAFGSPASALHMPPSVVVPTSPTDGQSTAAEVLGTADLDSPLQRRARRSPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMEQRPVGSCDSDDGGSSRESKQQI--------------------------EGHAGA--GNDERDG-----SLTEELLKMQKQIEAMLERHSKSLEGKIGETEQVISARLALLETKVHGLEVSSPL 316
            +SHG ++G  PLP   RSPLG R  QGP      XXXX         H+P I LG     +   G+LP P RV  SP  P  G        SDWLAVQQAFGSP+SALHMPP+VVVPTSP D  ++     G    D+P+ +   R  S S                                              +    PVGS   ++G + ++                               +G   A  G D+  G     SL EEL KM++QIEAMLERHSK+LEG++GETEQ+ISARLA+LETKVHGLE+ SPL
Sbjct:  415 VSHGGMSGVVPLPEQGRSPLGPRSAQGPPHEXXXXXXXXXXXXXXXXHVPAIDLGD----AAPMGMLPTPARVGSSPGSP-AGXXXXXXXXSDWLAVQQAFGSPSSALHMPPAVVVPTSPPDAPASGR---GVVVADTPMPKLPPRPSSASSIGEAAAVSAVVDAGTAKVDSGSSSSS-------------------SRVMSPVGSGRDEEGRADKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGGTSAAFGKDKDSGEDDDRSLAEELGKMRQQIEAMLERHSKTLEGRMGETEQMISARLAMLETKVHGLEIGSPL 710
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1251.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGE4_9PHAE5.060e-3338.08Centrosomal protein of 44 kDa n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1251contigP-littoralis_Contig1251:20440..21396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1251.5.1mRNA_P-littoralis_Contig1251.5.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1251 20345..21466 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1251.5.1 ID=prot_P-littoralis_Contig1251.5.1|Name=mRNA_P-littoralis_Contig1251.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=319bp
MGGADSLVWAQGHGRSASVGSSSAYSADLISHGSLAGAPLPTLARSPLGA
RVVQGPLQRHQQHQQHRSLSAMDLEHLPPISLGRGDSGSGSSGLLPPPLR
VSPAPPGLGGANGSGGESDWLAVQQAFGSPASALHMPPSVVVPTSPTDGQ
STAAEVLGTADLDSPLQRRARRSPSTSSLVLAASAAAFAGGAGGNGLDSS
SSSSSVDSVAVGGGLEGGGGRGGNMEQRPVGSCDSDDGGSSRESKQQIEG
HAGAGNDERDGSLTEELLKMQKQIEAMLERHSKSLEGKIGETEQVISARL
ALLETKVHGLEVSSPLQA*
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