prot_P-littoralis_Contig1251.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1251.4.1
Unique Nameprot_P-littoralis_Contig1251.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length86
Homology
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BLAST of mRNA_P-littoralis_Contig1251.4.1 vs. uniprot
Match: A0A6H5JGE4_9PHAE (Centrosomal protein of 44 kDa n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGE4_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 2.300e-28
Identity = 56/64 (87.50%), Postives = 59/64 (92.19%), Query Frame = 0 
Query:   24 GNPWDGIVSGDPRAALVVLHWILLDMSPLFAELLVDRDYP-LSSLTDFKFVATALRMLRDEFNC 86
            GNPWDGIVSGDPRAALVVLHW LLDMSPLFA LL+DRDY  L+S TDFKFVAT+LRMLRDEFNC
Sbjct:   56 GNPWDGIVSGDPRAALVVLHWTLLDMSPLFATLLLDRDYAGLTSATDFKFVATSLRMLRDEFNC 119
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BLAST of mRNA_P-littoralis_Contig1251.4.1 vs. uniprot
Match: D7G0L5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L5_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 1.570e-12
Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 0 
Query:   49 MSPLFAELLVDRDYP-LSSLTDFKFVATALRMLRDEFNC 86
            MSPLFA LL+DRDY  L+SLTDFKFVAT+LRMLRDEFNC
Sbjct:    1 MSPLFATLLLDRDYAGLTSLTDFKFVATSLRMLRDEFNC 39
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1251.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGE4_9PHAE2.300e-2887.50Centrosomal protein of 44 kDa n=1 Tax=Ectocarpus s... [more]
D7G0L5_ECTSI1.570e-1284.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029157Centrosomal CEP44 domainPFAMPF15007CEP44coord: 28..85
e-value: 1.3E-11
score: 44.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1251contigP-littoralis_Contig1251:14847..15104 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1251.4.1mRNA_P-littoralis_Contig1251.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1251 14847..15105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1251.4.1 ID=prot_P-littoralis_Contig1251.4.1|Name=mRNA_P-littoralis_Contig1251.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=86bp
PAQAQVAPAAAGGGGGSGNGTPTGNPWDGIVSGDPRAALVVLHWILLDMS
PLFAELLVDRDYPLSSLTDFKFVATALRMLRDEFNC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029157CEP44_CC