prot_P-littoralis_Contig125.129.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig125.129.1
Unique Nameprot_P-littoralis_Contig125.129.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length541
Homology
BLAST of mRNA_P-littoralis_Contig125.129.1 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE)

HSP 1 Score: 459 bits (1182), Expect = 9.590e-154
Identity = 316/562 (56.23%), Postives = 347/562 (61.74%), Query Frame = 0
Query:    1 MTALIADTSPILRNIPSDPPADHRHSFEFSPSPMPGRYLSEGN-NQDARAHSP--HGYNPREVPTLYAQHYGYTMAGAFAHHNPGAPA-------RLAVK---SCRCQR-PCSCNISDSKTAQXXXXXXXXXXXXXXSQRSMWRNNDSNSTIAVTARPDLFHGETSAHSMKTGLTVVSLSSAPSRSPSPSA-VLAQHRRD-SRHVMP-TIELGSSSSTSASTSTPKKSDWENLLGAVDLELRAQERAELVPDSASTTSLPTQHHYTHAINAAHQHHRDSHIKYAQQQXXXXXQPQLHHRSAAASVSPEFGPVDSTPR---HHHRRGAAMDSISGGEPAYSGTTADAACLLVTLPQRMLDRVSQHHQPASTAPXXXXXXXXXXXG-------------VAVPLPALVSASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIEQQLNDLSSGGXXRPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGAASSGRGKRSRRSAFGEHDEDQWVRE 529
            MTALIADTSPILRNIPSDP AD R SFEFSPSPMP +YLSEG   QD R HSP  H Y  REVP LY   YGY + G+FAH +P  PA       +LA K   SCRCQR  CSCN S S+TAQ                 +MWRN+        TARP  FHGE  A      ++V    SAPSRSPSPSA +LAQ+R+  S  V+P TIEL SS S        KKSDWENLLGAVDLELRAQ+R++ VPDS   T +P+ HHY  AINAAH H++   +  A          Q   + AAASVSPEFGPV + P     H                YSG+TADAACLL TLPQRMLDR            XXXXXXXXXXX              V +  PALVSASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIE+QLND+SS    RPFA                              A  S   KRSR++AFG+HDED W RE
Sbjct:    1 MTALIADTSPILRNIPSDP-ADRR-SFEFSPSPMPSQYLSEGTARQDHRRHSPSPHNYTAREVPALYPHRYGYNIGGSFAHSDPEVPAVAEKQQQQLAFKPTSSCRCQRRQCSCNSSPSETAQKDSSSSEPP-------HAMWRNSKGGDANMTTARPSFFHGEAPAQQPPAAVSV----SAPSRSPSPSAAILAQNRQQHSSRVLPRTIELTSSPS--------KKSDWENLLGAVDLELRAQQRSKFVPDSTPATPVPS-HHYARAINAAHLHYQHQPLDDAPPLLTGGGYTQQ--QRAAASVSPEFGPVKTAPAPAGRHXXXXXXXXXXXXXXXXYSGSTADAACLLATLPQRMLDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGIMPPALVSASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSVSG-RPFATAGAGGAAAPRSCTPPATYLEGDAAAAP--ALPSPTAKRSRKTAFGDHDEDGWARE 535          
BLAST of mRNA_P-littoralis_Contig125.129.1 vs. uniprot
Match: D8LFR4_ECTSI (Pathogenesis-related transcriptional factor and ERF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR4_ECTSI)

HSP 1 Score: 371 bits (952), Expect = 1.610e-120
Identity = 259/495 (52.32%), Postives = 282/495 (56.97%), Query Frame = 0
Query:    1 MTALIADTSPILRNIPSDPPADHRHSFEFSPSPMPGRYLSEGN-NQDARAHSP--HGYNPREVPTLYAQHYGYTMAGAFAHHNPGAPARLAVKSCRCQRPCSCNISDSKTAQXXXXXXXXXXXXXXSQRS------MWRNNDSNSTIAVTARPDLFHGETSAHSMKTGLTVVSLSSAPSRSPSPSA-VLAQHRRD-SRHVMP-TIELGSSSSTSASTSTPKKSDWENLLGAVDLELRAQERAELVPDSASTTSLPTQHHYTHAINAAHQHHRDSHIKYAQQQXXXXXQPQL----------------HHRSAAASVSPEFGPVDSTP--RHHHRRGAAMDSISGGEPAYSGTTADAACLLVTLPQRMLDRVSQHHQPASTAPXXXXXXXXXXXGVAVPLPALVSASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIEQQLNDLSS 465
            MTALIADTSPILRNIPSDP AD R SFEFSPSPMP +YLSEG  +QD R HSP  H Y  REVP LY   YGY M G+FAH +P  P  +                      XXXXXXXXXX       S      MWRN+        TARP LFHGE  A      ++V    SAPSRSPSPSA +LAQ+++  S  VMP TIEL SS +        KKSDWENLLGAVDLELRAQ+R+E VPDS   T +P+ HHY HAINAAH HH        Q Q      P L                 H+ AAASVSPEFGP+ + P  RH               PAYSG+TADAACLL                                                        ASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIE+QLND+SS
Sbjct:    1 MTALIADTSPILRNIPSDP-ADRR-SFEFSPSPMPAQYLSEGTASQDHRRHSPSPHSYTAREVPALYPHRYGYNMGGSFAHSDPQVPVAVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAQKDSSSSEPPHAMWRNSKGGDANMTTARPGLFHGEAPAQQPPAAVSV----SAPSRSPSPSAAILAQNQQQHSSRVMPRTIELTSSPA--------KKSDWENLLGAVDLELRAQQRSEFVPDSTPATPVPS-HHYAHAINAAHLHH--------QHQPLDDAPPLLTGXXXXXXXXXXXXYTQHQPAAASVSPEFGPIKTAPAARHXXXXXXXXXXXXXXGPAYSGSTADAACLL--------------------------------------------------------ASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISS 416          
BLAST of mRNA_P-littoralis_Contig125.129.1 vs. uniprot
Match: A0A835Z3I9_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.520e-26
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0
Query:  386 QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLN 451
            QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGV+DSE  AARAY+ +AL+HF  GAKLN
Sbjct:  227 QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVYDSELQAARAYNDSALEHFGAGAKLN 292          
BLAST of mRNA_P-littoralis_Contig125.129.1 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK)

HSP 1 Score: 117 bits (293), Expect = 4.800e-26
Identity = 52/72 (72.22%), Postives = 67/72 (93.06%), Query Frame = 0
Query:  384 RVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDG 455
            RVQ++GRRGPRGQS+FKGVC+TRAGKWR+VIY+GRKQ YLGVF++E +AA+AYD +A+++F +GA LNFPDG
Sbjct:  137 RVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNFPDG 208          
BLAST of mRNA_P-littoralis_Contig125.129.1 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK)

HSP 1 Score: 117 bits (293), Expect = 6.400e-26
Identity = 52/72 (72.22%), Postives = 67/72 (93.06%), Query Frame = 0
Query:  384 RVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDG 455
            RVQ++GRRGPRGQS+FKGVC+TRAGKWR+VIY+GRKQ YLGVF++E +AA+AYD +A+++F +GA LNFPDG
Sbjct:  150 RVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNFPDG 221          
BLAST of mRNA_P-littoralis_Contig125.129.1 vs. uniprot
Match: D7FLT6_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT6_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 4.480e-23
Identity = 59/84 (70.24%), Postives = 67/84 (79.76%), Query Frame = 0
Query:  390 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIEQQLNDLSSGGXXRPFA 473
            RRGP GQS FKGVCIT AG WRAVIY+ RKQKYLGVFDSEFDAARAYDAAA  H   G++LN PD IE++L +LS+    +PFA
Sbjct:  304 RRGPPGQSSFKGVCITPAGTWRAVIYVDRKQKYLGVFDSEFDAARAYDAAARVH-CPGSQLNNPDQIERELYELSAA-DGKPFA 385          
BLAST of mRNA_P-littoralis_Contig125.129.1 vs. uniprot
Match: A0A6H5KY97_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY97_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 1.350e-22
Identity = 58/84 (69.05%), Postives = 69/84 (82.14%), Query Frame = 0
Query:  390 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIEQQLNDLSSGGXXRPFA 473
            RRGP GQS FKGVCIT AG WRAVIY+ RKQKYLGVFDSEFDAARAYDAAA + +  G++LN PD IE++L++LS+    +PFA
Sbjct:  421 RRGPPGQSSFKGVCITPAGTWRAVIYVDRKQKYLGVFDSEFDAARAYDAAA-RVYCPGSQLNNPDQIERELHELSAA-DGKPFA 502          
BLAST of mRNA_P-littoralis_Contig125.129.1 vs. uniprot
Match: A0A835YVU4_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVU4_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.240e-17
Identity = 50/78 (64.10%), Postives = 54/78 (69.23%), Query Frame = 0
Query:  387 ASGRRGPRGQSRFKGVCITRAGKWRAVI-------------YIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLN 451
            A  RRGPRGQSRFKGVCITRAGKWRAVI             +IGR+QKYLGVFDSE  AA AY+ +A Q F   AKLN
Sbjct:  187 AKSRRGPRGQSRFKGVCITRAGKWRAVICEWLAAVAEFLHNHIGRRQKYLGVFDSEVQAAVAYNESAKQFFGAEAKLN 264          
BLAST of mRNA_P-littoralis_Contig125.129.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.110e-16
Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 0
Query:  372 LVSASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 452
            L SAS P     R   + RRG +G+S ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D AA  HF   A +NF
Sbjct:    4 LASASSPIKGGPRNPTARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84          
BLAST of mRNA_P-littoralis_Contig125.129.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.130e-15
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0
Query:  399 FKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 452
            ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D AA QHF + A +NF
Sbjct:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQM0_9PHAE9.590e-15456.23AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D8LFR4_ECTSI1.610e-12052.32Pathogenesis-related transcriptional factor and ER... [more]
A0A835Z3I9_9STRA1.520e-2686.36AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A6V1UZI2_HETAK4.800e-2672.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6J2_HETAK6.400e-2672.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FLT6_ECTSI4.480e-2370.24AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KY97_9PHAE1.350e-2269.05AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A835YVU4_9STRA4.240e-1764.10AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CI56_9STRA3.110e-1656.79AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CH07_9STRA3.130e-1566.67AP2/ERF domain-containing protein (Fragment) n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 398..459
e-value: 6.1E-9
score: 45.7
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 397..441
e-value: 3.7E-5
score: 23.9
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 398..453
score: 13.761712
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 397..454
e-value: 1.7E-15
score: 58.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 513..529
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 460..540
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 397..454

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig125contigP-littoralis_Contig125:444367..446717 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig125.129.1mRNA_P-littoralis_Contig125.129.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig125 444216..448444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig125.129.1 ID=prot_P-littoralis_Contig125.129.1|Name=mRNA_P-littoralis_Contig125.129.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=541bp
MTALIADTSPILRNIPSDPPADHRHSFEFSPSPMPGRYLSEGNNQDARAH
SPHGYNPREVPTLYAQHYGYTMAGAFAHHNPGAPARLAVKSCRCQRPCSC
NISDSKTAQQQQHQQQQQLSSSESQRSMWRNNDSNSTIAVTARPDLFHGE
TSAHSMKTGLTVVSLSSAPSRSPSPSAVLAQHRRDSRHVMPTIELGSSSS
TSASTSTPKKSDWENLLGAVDLELRAQERAELVPDSASTTSLPTQHHYTH
AINAAHQHHRDSHIKYAQQQQQHQHQPQLHHRSAAASVSPEFGPVDSTPR
HHHRRGAAMDSISGGEPAYSGTTADAACLLVTLPQRMLDRVSQHHQPAST
APAPAAGAGGGCGGVAVPLPALVSASGPPVTPVRVQASGRRGPRGQSRFK
GVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKL
NFPDGIEQQLNDLSSGGGGRPFATAGAGGAAAPRSSTPPAFLETPAAAAA
DTGAASSGRGKRSRRSAFGEHDEDQWVREAPRQWSNSSRI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf