mRNA_P-littoralis_Contig125.112.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig125.112.1 vs. uniprot
Match: A0A6H5KNZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ7_9PHAE) HSP 1 Score: 479 bits (1233), Expect = 7.290e-153 Identity = 337/680 (49.56%), Postives = 432/680 (63.53%), Query Frame = 1
Query: 1 EHGRFYFYNPNTGVTTWKPPPEAQVVRGTLAPPKPTEREVPTRRGSVTVRSRSSVILSEGGKVQRRARSTGGELSVHTRAHP---RENSGLETTDELAGHRDRAMETRSSTEPRIWPIRYQVLAIKRPEDKCAGPDGEGERKSHARRAAGKNNSGDKNSVPRDIQRIISRDTPEETTLASTWDEQTDQPRGKRPGQSEESPLMDTALTSQA--IIASSLLRAENWLANNEPEIEPEKQFRNHESGQPNPTQKPEPSSRRTSRKSMTCRNDCAEADVSPEVVQNELSGAT-ARLRGKAAAVRAAMELQRREEQEMTGKPEITRLGRSKQRSVDDLFLFQQNIEASRRQKREERETHEESFVTGRPDTCRRSAVLVERMRREG-HDAHLSPSQRLHGKACEQQRRHERLQIRVETAIRRRANPEISTRSRSLPRHDGNLDVAHRLYEQALLSREEALERERLAQKPPRGVTFRPEIHQRSGVLAQRRRARWASLGLDAPDSGGGIAVQEVLLAEGTLYERRRRERQSRQEQVALRLQKQTFNRHSRRLLQNAERRGRSVGTQADSGTMEKPRGSQAIDVDGVEEDDLFVPRLLARDTSNRMLESRYG-DCIPSMEQRDKDREEERIEKT-AQLAERNKENRNAVARRTIRSSSQSKRSLVDADGCRDIYERATEYVRQSESR 2013
EHGR YFYN +TG TTW PPP+++ + PP T R G+VTVRSRSS+ILS+GGK+Q + HP + L TTDEL R ++T ++ + ++ + + P+ E E +R+A + + + V QR + PEE+T W +P +R + EE P + A +SQ ++A+SL +AE+WLA NEP+ E + ++ Q P +R TS + T + +A EV +E AT ARLRG+AAAVR AME +R+E +EMTG+PEITR GR+KQRSVDDLFLFQ+N EASRR++ +ERETHE VTGRP+TCRRSAVLV+RMRR G +DAHL SQRLH A EQ+RR + Q RVETAIRRRANP ISTRS+SLPR G DVA RLYEQA+LSRE A RE+L++KPPRG TFRPEI QRS +LAQRRR RWAS+GLD GGG AVQE LLAEG LY+RRR+ER+S QE++ALR T NRHSRRLL+ A + GRS GTQ++ + R S+A+D + E F PRL TS +MLESRYG D IPSM+QR KDRE E +E+ +Q E++KEN++ VARR R SS S+ G DIYER TEY ++ +SR
Sbjct: 57 EHGRLYFYNVDTGETTWDPPPQSREGATSGPPPATTNRS-----GAVTVRSRSSMILSKGGKIQFGRSCSAVSSRSEALKHPTVVHKGGRLGTTDELEDGGGRTLKTGTTRGAVVRSTLHRASTVPARNVEGESPEAEREGCKSSRQAPVQKDGAETKRVLGSPQRSVG--CPEESTPLPKWSG-LKKPTRQRAKRVEEPPTLKPAPSSQGNHLVATSLQQAEHWLATNEPDSELGRPYQRRGPDQTPPKPDFWLGTRETSGRFATSTH-VVDASQKEEVPLHEPPAATTARLRGQAAAVREAMESRRKEAEEMTGRPEITRRGRNKQRSVDDLFLFQRNAEASRRRRHDERETHENKLVTGRPETCRRSAVLVKRMRRGGGNDAHLPTSQRLHSDAGEQRRRRDTQQARVETAIRRRANPNISTRSKSLPRERG--DVARRLYEQAILSREGAHYREQLSRKPPRGYTFRPEIDQRSALLAQRRRDRWASVGLDTRGRGGGTAVQEFLLAEGKLYDRRRQERKSIQEELALRRPNPTVNRHSRRLLRAAGKTGRSPGTQSEE---TRSRASEAVDAEHYE----FRPRLEGLGTSQKMLESRYGRDAIPSMQQRAKDREVELLERRRSQSVEQDKENQSFVARRASRRSSASESPEHGRGG--DIYERTTEYAKRRDSR 716
BLAST of mRNA_P-littoralis_Contig125.112.1 vs. uniprot
Match: D8LFS2_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFS2_ECTSI) HSP 1 Score: 466 bits (1200), Expect = 1.590e-151 Identity = 328/654 (50.15%), Postives = 415/654 (63.46%), Query Frame = 1
Query: 1 EHGRFYFYNPNTGVTTWKPPPEAQVVRGTLAPPKPTEREVPTRRGSVTVRSRSSVILSEGGKVQRRARSTGGELSVHTRAHP---RENSGLETTDELAGHRDRAMETRSSTEPRIWPIRYQVLAIKRPEDKCAGPDGEGERKSHARRAAGKNNSGDKNSVPRDIQRIISRDTPEETTLASTWDEQTDQPRGKRPGQSEESPLMDTALTSQA--IIASSLLRAENWLANNEPEIEPEKQFRNHESGQPNPTQKPEPSSRRTSRKSMTCRN--DCAEADVSPEVVQNELSGATARLRGKAAAVRAAMELQRREEQEMTGKPEITRLGRSKQRSVDDLFLFQQNIEASRRQKREERETHEESFVTGRPDTCRRSAVLVERMRREG-HDAHLSPSQRLHGKACEQQRRHERLQIRVETAIRRRANPEISTRSRSLPRHDGNLDVAHRLYEQALLSREEALERERLAQKPPRGVTFRPEIHQRSGVLAQRRRARWASLGLDAPDSGGGIAVQEVLLAEGTLYERRRRERQSRQEQVALRLQKQTFNRHSRRLLQNAERRGRSVGTQADSGTMEKPRGSQAIDVDGVEEDDLFVPRLLARDTSNRMLESRYG-DCIPSMEQRDKDREEERIEKT-AQLAERNKENRNAVARRTIRSSSQS 1932
EHGR YFYN +TG TTW PPP+++ + PP T R G+VTVRSRSSVILS+GGK+Q + HP + L TTDEL R ++T ++ + + ++ + + P E E + +R+A GK + + V QR + PEE+T W +P +R EE P A +SQ ++ SSL +AE WLA NEPE E + +R Q P +R TS + T + D ++ + P + + TARLRG+AAAVR AMEL+R+E +EMTG+PEITR GR+KQRSVDDL LFQ+N EASRR++ +ERETHE VTGRP+TCRRSAVLV+RMRR G +DAHL SQRLH A EQ+RR + Q RVETAIRRRANP ISTRS+SLPR G DVA RLYEQA+LSRE A RE+L++KPPRG TFRPEI QRS +LAQRRR RWAS+GLD GG AVQE LLAEGTLY+RRR+ERQS QE++ALR T NRHSRRLL+ A + GRS GTQ++ + R S+A++ + E F PRL TS +MLESRYG D IPSM+QR KDRE E +E+ +Q E++KE+R+ VARR R SS S
Sbjct: 45 EHGRLYFYNLDTGETTWDPPPQSREGETSGPPPAATNRS-----GAVTVRSRSSVILSKGGKIQFGRSCSAVSSRSEAPKHPTVVHKGGRLGTTDELDDGGGRTLKTGTTEGAVVRSMLHRASTLPARNVEGESPGAEREGYTSSRQAPGKKDGDETKHVLGSPQRSVG--CPEESTPLPKWSG-LKKPTRQRAKHVEEPPTSKPAPSSQGNHLVPSSLQQAEQWLATNEPESELGRPYRRRGPDQTPPKPDFSLGTRETSGRFATPTHVEDASQKEGVP--MHEPPAATTARLRGQAAAVREAMELRRKEAEEMTGRPEITRRGRNKQRSVDDLLLFQRNAEASRRRRHDERETHENKLVTGRPETCRRSAVLVKRMRRGGGNDAHLPTSQRLHSDAGEQRRRRDTQQARVETAIRRRANPNISTRSKSLPRERG--DVARRLYEQAILSREGAHYREQLSRKPPRGHTFRPEIDQRSALLAQRRRDRWASVGLDKRGRRGGTAVQEFLLAEGTLYDRRRQERQSIQEELALRRPNPTVNRHSRRLLRAAGKTGRSPGTQSEE---TRSRASEAVEAEQYE----FSPRLEGLGTSQKMLESRYGRDAIPSMQQRAKDREVEILERRRSQSVEQDKEDRSFVARRASRRSSAS 679 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig125.112.1 >prot_P-littoralis_Contig125.112.1 ID=prot_P-littoralis_Contig125.112.1|Name=mRNA_P-littoralis_Contig125.112.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=714bp EHGRFYFYNPNTGVTTWKPPPEAQVVRGTLAPPKPTEREVPTRRGSVTVRback to top mRNA from alignment at P-littoralis_Contig125:389744..392913+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig125.112.1 ID=mRNA_P-littoralis_Contig125.112.1|Name=mRNA_P-littoralis_Contig125.112.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3170bp|location=Sequence derived from alignment at P-littoralis_Contig125:389744..392913+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig125:389744..392913+ >mRNA_P-littoralis_Contig125.112.1 ID=mRNA_P-littoralis_Contig125.112.1|Name=mRNA_P-littoralis_Contig125.112.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2142bp|location=Sequence derived from alignment at P-littoralis_Contig125:389744..392913+ (Pylaiella littoralis U1_48)back to top |