prot_P-littoralis_Contig125.111.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig125.111.1
Unique Nameprot_P-littoralis_Contig125.111.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length143
Homology
BLAST of mRNA_P-littoralis_Contig125.111.1 vs. uniprot
Match: D8LFS3_ECTSI (Cytochrome c oxidase subunit Vb n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS3_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 5.600e-66
Identity = 112/142 (78.87%), Postives = 117/142 (82.39%), Query Frame = 0
Query:    1 MFSAVARRAGVTVRAAAIMRPQPAAATAAAAAVPALRAGGASALVPQVARFSGQVGDGGIPDIHDTGRQKDEREGATFNRDPIHPPKGSGTKAMPFEVPSEHEERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLVPL 142
            MFS VAR  GV  RAAA+ RPQP AA A        RA  ++A +PQVARFS  VGDGGIPD HDTGRQK EREG  FNRDPIHPPKGSGTKAMPFEVPSEH+ERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLVPL
Sbjct:    1 MFSTVARHVGVAARAAAL-RPQPTAAAA-------WRA--SAAALPQVARFSDGVGDGGIPDTHDTGRQKTEREGVGFNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLVPL 132          
BLAST of mRNA_P-littoralis_Contig125.111.1 vs. uniprot
Match: A0A6U3QRH7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3QRH7_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.800e-22
Identity = 48/83 (57.83%), Postives = 58/83 (69.88%), Query Frame = 0
Query:   64 HDTGRQ----KDEREG-ATFNRDPIHPPKGSGTKAMPFEVPSEHEERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLVP 141
            H  GR+    +DE+ G  TFNRDPI PP G+GTK  P +VPS ++ERVVGFE P  H + WF + AGKLHYV  ID+YF LVP
Sbjct:   45 HQGGRRLQEIEDEKLGLVTFNRDPIMPPVGAGTKENPIQVPSGYDERVVGFEDPTVHQLQWFTMTAGKLHYVSSIDKYFTLVP 127          
BLAST of mRNA_P-littoralis_Contig125.111.1 vs. uniprot
Match: A0A7S1XX62_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX62_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.770e-19
Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = 0
Query:   57 DGGIPDIHDT--GRQKDEREGAT-----FNRDPIHPPKGSGTKAMPFEVPSEHEERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKL 139
            DG IPDI D   GR+K E +        FNRDPI PP G+GTK  P  VPSE +ERVVGFE P++H + WF L A   +Y+E +D+YFKL
Sbjct:   34 DGLIPDIEDQVFGRRKMELDAEKSGDLLFNRDPIVPPVGAGTKENPILVPSEFKERVVGFEDPDTHQIAWFCLQADATYYIESVDKYFKL 123          
BLAST of mRNA_P-littoralis_Contig125.111.1 vs. uniprot
Match: A0A835ZBD2_9STRA (Cytochrome c oxidase subunit VB n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD2_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.960e-19
Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 0
Query:   62 DIHDTGRQKDEREGATFNRDPIHPPKGSGTKAMPFEVPSEHEERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKL 139
            D+  TG++ +E  G  FN   + PP GSGT+  P EVPS  + R VG+E PE+HA+YWF L AGK+H+V  ID YFKL
Sbjct:   48 DVAATGQRGEEVRGTFFNDQALMPPAGSGTREKPIEVPSRLDMRTVGYEDPETHAIYWFNLKAGKVHHVTPIDMYFKL 125          
BLAST of mRNA_P-littoralis_Contig125.111.1 vs. uniprot
Match: A0A6U1NDJ1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NDJ1_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 5.830e-15
Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 0
Query:   69 QKDEREGATFNRDPIHPPKGSGTKAMPFEVPSEHEERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLV 140
            +++ ++   + RDP+ P  G GT A P  VPS  +ER VGFE P SH M WF L  G +H+VEEID YFKL+
Sbjct:   52 EQEAKKEVAYVRDPVIPEPGQGTLANPILVPSAMKERAVGFEDPLSHQMQWFVLQEGDIHWVEEIDMYFKLI 123          
BLAST of mRNA_P-littoralis_Contig125.111.1 vs. uniprot
Match: A0A024FVF4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FVF4_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.920e-11
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 0
Query:   60 IPDIHD--TGRQKDEREGA-----TFNRDPIHPPKGSG-TKAMPFEVPSEHEERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKL 139
            IPDI+D   GRQ++E E       TFNRDPI   +  G +K  P  VPS ++ R +G  H +S  ++WF L  GK+ YV +I++YFKL
Sbjct:   27 IPDIYDHAVGRQREELEDEKAGIITFNRDPIETDETQGNSKEDPILVPSFNDVRPIGVSHNDSSYVFWFNLQKGKIFYVPQIEKYFKL 114          
BLAST of mRNA_P-littoralis_Contig125.111.1 vs. uniprot
Match: A0A4D9DB47_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB47_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 4.560e-11
Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   78 FNRDPIHPPKGSGTKAMPFEVPSEHEERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKL 139
            FNRDP+      GTK+ P  VPS   ER+VG+E P  H ++WF L  G L YV +ID+YF L
Sbjct:   93 FNRDPVFALPDQGTKSNPVLVPSGENERIVGYEDPHVHQVFWFKLRKGDLVYVPKIDKYFSL 154          
BLAST of mRNA_P-littoralis_Contig125.111.1 vs. uniprot
Match: W7TKL4_9STRA (Cytochrome c oxidase subunit vb n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKL4_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.100e-10
Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   78 FNRDPIHPPKGSGTKAMPFEVPSEHEERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKL 139
            FNRDP+      GTK+ P  VPS   ER+VG+E P  H ++WF L  G L YV +ID+YF L
Sbjct:  195 FNRDPVFALPDQGTKSNPVLVPSGENERIVGYEDPHVHQVFWFKLRKGDLVYVPKIDKYFSL 256          
BLAST of mRNA_P-littoralis_Contig125.111.1 vs. uniprot
Match: A0A1W0A2M6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2M6_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 4.020e-8
Identity = 38/88 (43.18%), Postives = 51/88 (57.95%), Query Frame = 0
Query:   60 IPDIHD--TGRQKDEREGAT-----FNRDPIHPPKGSG-TKAMPFEVPSEHEERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKL 139
            +P++ D   GRQ DE + A      F+RDPI   +  G +K  P  VPS   ERVVG  H +S  + WF L  GK++YV + D+YFKL
Sbjct:   25 VPNMIDQAVGRQGDELKMAEQGIDLFSRDPIFSEETQGNSKDDPILVPSFQSERVVGISHNDSPYIKWFNLHEGKVYYVPDYDKYFKL 112          
BLAST of mRNA_P-littoralis_Contig125.111.1 vs. uniprot
Match: A0A485KGU5_9STRA (Aste57867_13701 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGU5_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 5.650e-8
Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 0
Query:   78 FNRDPIHPPKGSG-TKAMPFEVPSEHEERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKL 139
            FNRDP+   +  G +K  P  VPS + +R VG  H +S  + WF L  GK+HYV + D+YFKL
Sbjct:   50 FNRDPVSSEEHQGNSKDDPILVPSFNSQRAVGISHNDSPYIVWFNLDEGKVHYVPQFDKYFKL 112          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LFS3_ECTSI5.600e-6678.87Cytochrome c oxidase subunit Vb n=2 Tax=Ectocarpus... [more]
A0A6U3QRH7_9STRA2.800e-2257.83Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1XX62_9STRA1.770e-1953.33Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835ZBD2_9STRA3.960e-1952.56Cytochrome c oxidase subunit VB n=1 Tax=Tribonema ... [more]
A0A6U1NDJ1_9STRA5.830e-1550.00Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A024FVF4_9STRA2.920e-1144.32Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A4D9DB47_9STRA4.560e-1150.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TKL4_9STRA2.100e-1050.00Cytochrome c oxidase subunit vb n=1 Tax=Nannochlor... [more]
A0A1W0A2M6_9STRA4.020e-843.18Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A485KGU5_9STRA5.650e-846.03Aste57867_13701 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036972Cytochrome c oxidase, subunit Vb superfamilyGENE3D2.60.11.10Cytochrome c oxidase, subunit Vbcoord: 57..142
e-value: 1.7E-13
score: 52.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig125contigP-littoralis_Contig125:388263..388691 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig125.111.1mRNA_P-littoralis_Contig125.111.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig125 387007..388714 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig125.111.1 ID=prot_P-littoralis_Contig125.111.1|Name=mRNA_P-littoralis_Contig125.111.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=143bp
MFSAVARRAGVTVRAAAIMRPQPAAATAAAAAVPALRAGGASALVPQVAR
FSGQVGDGGIPDIHDTGRQKDEREGATFNRDPIHPPKGSGTKAMPFEVPS
EHEERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLVPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036972Cyt_c_oxidase_su5b_sf