mRNA_P-littoralis_Contig125.83.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig125.83.1
Unique NamemRNA_P-littoralis_Contig125.83.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig125.83.1 vs. uniprot
Match: D8LFS9_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFS9_ECTSI)

HSP 1 Score: 639 bits (1647), Expect = 3.750e-219
Identity = 329/448 (73.44%), Postives = 366/448 (81.70%), Query Frame = 3
Query:  123 EGYLAWAEEELGVVIHHKLRVSSTPGREERGVFCEDDIPADTIVVSVPWETLMTIDSAKGTPFEGLMEVGAREDDVLCLLLLYHRHVLKDLSPLKKHMDVLPREYHQTIFYSDDELELLRGTSLHAVTVQWKTQVASDFRELEEMRLQQPSE---AVLTVKDALVGSLTKEHYLWALGTVWSRFVTVEREGRPLKAMAPVFDMFNHDPVSETVHGFQESNQCLHLVTLQSWASGSEVKFSYGPLPNSRLLLLHGFCLPSNAFESVELWTTMEPGAPGYAAKQKILEDNGVDLSKRPFILTDKGLDPRLLPALRVQRATESELKVVADTPWGESLSARNEAEVCEGLCAALSEMLKVRQEGGLSSSSSSSNGPVA-QAQEGRTATTTNAPPLAPGGGEVEGTEGGPGRSVLPEDRRRAVELLREGEERVLRFCLDWVEDYRLRMEQQLE 1454
            EGYL WA+EELGVV+HH LRVSSTPG+EERGVFCE++IPA+TIVVSVPWE LMT+DSAKGTPFEGLME GAREDDVLCLLLLYHRH+LK+ SPLK HMDVLPREYHQTIFYSDDELELLRGTSLHAVTVQWK QV +DFRELE + L  P        T +DAL G LTKE YLWALGTVWSRFVTVER GR LKAMAPVFDMFNH P+S TVHG+QESN CLHLVTLQ WASGSEVKFSYGPLPNSRLLLLHGFCLP N FESVELW  MEPGAPG+A K KI+ DNGVD SKRPF LT KGLDP LLPALRVQRATE+ELKV A+TPWGE+L ARNEA V + L  AL+ MLK R+  G S++ +S NGPV+ +AQ  RT    N      GG E    +GG  R+++PEDR  A ELLR+GE+RVL+ CLDWVEDYR  ++ Q+E
Sbjct:   10 EGYLDWAQEELGVVVHHPLRVSSTPGKEERGVFCEENIPAETIVVSVPWEALMTVDSAKGTPFEGLMEAGAREDDVLCLLLLYHRHILKERSPLKGHMDVLPREYHQTIFYSDDELELLRGTSLHAVTVQWKAQVDTDFRELEALPLPSPRSEEGGSSTARDALEGFLTKEEYLWALGTVWSRFVTVERAGRGLKAMAPVFDMFNHGPLSSTVHGYQESNDCLHLVTLQDWASGSEVKFSYGPLPNSRLLLLHGFCLPDNPFESVELWAMMEPGAPGFAEKNKIMLDNGVDPSKRPFFLTSKGLDPLLLPALRVQRATETELKVAAETPWGETLGARNEAAVVDVLWNALAGMLKERE--GPSTAHASCNGPVSGEAQASRTPPDPNNDTGGEGGEE----DGGAERTIVPEDRSAAAELLRKGEQRVLQKCLDWVEDYRSGLKHQVE 451          
BLAST of mRNA_P-littoralis_Contig125.83.1 vs. uniprot
Match: A0A6H5KQN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQN9_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 3.380e-89
Identity = 143/180 (79.44%), Postives = 155/180 (86.11%), Query Frame = 3
Query:  123 EGYLAWAEEELGVVIHHKLRVSSTPGREERGVFCEDDIPADTIVVSVPWETLMTIDSAKGTPFEGLMEVGAREDDVLCLLLLYHRHVLKDLSPLKKHMDVLPREYHQTIFYSDDELELLRGTSLHAVTVQWKTQVASDFRELEEMRLQQPSE---AVLTVKDALVGSLTKEHYLWALGTV 653
            EGYL WA+EELGVV+HH LRVSSTPG+EERGVFCE++IPA+TIVVSVPWE LMT+DSAKGTPFEGLME GAREDDVLCLLLLYHRH+LK+ SPLK HMDVLPREYHQTIFYSDDELE LRGTSLHAVTVQWK QV +DFRELE + L  P        TV+D L G LTKE YLWALGTV
Sbjct:   10 EGYLEWAQEELGVVVHHPLRVSSTPGKEERGVFCEENIPAETIVVSVPWEALMTVDSAKGTPFEGLMEAGAREDDVLCLLLLYHRHILKERSPLKGHMDVLPREYHQTIFYSDDELEPLRGTSLHAVTVQWKAQVDTDFRELEALPLSSPRSEEGGSSTVRDVLEGFLTKEEYLWALGTV 189          
BLAST of mRNA_P-littoralis_Contig125.83.1 vs. uniprot
Match: A0A6G0WXU3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXU3_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.250e-65
Identity = 137/359 (38.16%), Postives = 214/359 (59.61%), Query Frame = 3
Query:  126 GYLAWAEEELGVVIHHKLRVSSTPGREERGVFCEDDIPADTIVVSVPWETLMTIDSAKGTPFEGLMEVGAREDDVLCLLLLYHRHVLKDLSPLKKHMDVLPREYHQTIFYSDDELELLRGTSLHAVTVQWKTQVASDFRELEEMRLQQPSEAVLTVK---DALVGSLTKEHYLWALGTVWSRFVTVEREGRPL-KAMAPVFDMFNHDPVSETVHGFQESNQCLHLVTLQSWASGSEVKFSYGPLPNSRLLLLHGFCLPSNAFESVELWTTMEPGAPGYAAKQKILEDNGV-DLSKRPFILTDKGLDPRLLPALRVQRATESELK-VVADTP--WGESLSARNEAEVCEGLCAALSEMLK 1178
            GY AWA E LG+ ++  L   +     +RGV+  DDI   T V+S+P E+L+ + S   +P +  + +  REDD+L   L+Y  + L   S  K+H+DVLP++YH  ++++  E++LL G +++ + +Q + QV +DF EL++  L   +  +L+ +   + L+ + + E+Y WAL  +WSRFV+V  +   L K+M PVFDMFNHDP+++  HGF  S     L +   W+SGS+V  +YG LPN +LL L+GF L SN F+SVELW  M   AP Y  K K++E +G+ + ++ PF L    ++  LL  LR+QR   ++L  VV +TP    E +   NE +    L  AL +ML+
Sbjct:    8 GYNAWASEALGISVNADLVYEAKSEGGDRGVYIADDIMPQTTVLSIPSESLLNVHSIASSPLQNFLSLPLREDDLLAWFLIYE-NFLNPQSKWKRHLDVLPKKYHNILYFTTKEIDLLAGCNIYHIALQLQQQVDADFAELQQT-LVPDTLRLLSGEFSTEVLLTAFSIENYKWALSVIWSRFVSVALDEDNLAKSMVPVFDMFNHDPLAQMTHGFDPSTNSFVLRSHLHWSSGSQVFINYGALPNHKLLTLYGFVLASNPFDSVELWAPMGEDAPYYNRKIKLMEGHGLAEHAQAPFELHGDSVNDDLLAYLRIQRLDVADLSSVVVETPNFAFEPVHDENEKDTLTALIYALQQMLE 364          
BLAST of mRNA_P-littoralis_Contig125.83.1 vs. uniprot
Match: A0A1V9YVA9_9STRA (SET domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YVA9_9STRA)

HSP 1 Score: 234 bits (597), Expect = 8.290e-65
Identity = 136/355 (38.31%), Postives = 200/355 (56.34%), Query Frame = 3
Query:  126 GYLAWAEEELGVVIHHKLRVSSTPGREERGVFCEDDIPADTIVVSVPWETLMTIDSAKGTPFEGLMEVGAREDDVLCLLLLYHRHVLKDLSPLKKHMDVLPREYHQTIFYSDDELELLRGTSLHAVTVQWKTQVASDFRELEEMRLQQPSEAVLT--VKDALVGSLTKEHYLWALGTVWSRFVTVEREGRPL-KAMAPVFDMFNHDPVSETVHGFQESNQCLHLVTLQSWASGSEVKFSYGPLPNSRLLLLHGFCLPSNAFESVELWTTMEPGAPGYAAKQKILEDNGV-DLSKRPFILTDKGLDPRLLPALRVQRATESELKVVADTPWG-ESLSARNEAEVCEGLCAALSEML 1175
            GY AWA E L + +   L      G  +RGVF  + I A T ++SVP+E+L+ + S   +P   +  +  REDD L   L+Y    L   S   +H+ VLP+++H  ++++DD++ LL+G++++ V  Q + QV SDF EL+   L +   A+      DA++ + T E+Y WAL  +WSRFV+V      + K M PVFDMFNHDP ++  HGF    Q   L + Q WA G++V  +YG LPN +LL L+GF L  N +++VELW  M   AP YA K   +  +G+   S++PF LT  G++  LL  LR+QR   +EL     + +  E LS  NE      L  AL +ML
Sbjct:    7 GYNAWASEALDIAVGADLVYEELDG--DRGVFVSEAIKAHTAILSVPFESLLNLYSIAQSPLREIPHLHEREDDCLAWFLMYETF-LNPNSKWARHLQVLPKDFHNILYFADDDIALLQGSNVYYVARQLQQQVVSDFDELKVTILPETLRALADDFSSDAILAAFTLENYKWALSVIWSRFVSVATSTDSMVKCMVPVFDMFNHDPSAQMAHGFDPRTQAFVLQSHQYWAPGTQVFINYGALPNHKLLTLYGFVLAKNPYDTVELWAPMSEDAPYYARKMAFISAHGLAQHSRQPFDLTTLGVNEELLAYLRIQRMDVAELSSFEGSSFAYEPLSDDNEKSTLTALIYALQQML 358          
BLAST of mRNA_P-littoralis_Contig125.83.1 vs. uniprot
Match: A0A024UBV8_9STRA (SET domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBV8_9STRA)

HSP 1 Score: 230 bits (587), Expect = 3.200e-63
Identity = 135/361 (37.40%), Postives = 199/361 (55.12%), Query Frame = 3
Query:  126 GYLAWAEEELGVVIHHKLRVSSTPGREERGVFCEDDIPADTIVVSVPWETLMTIDSAKGTPFEGLMEVGAREDDVLCLLLLYHRHVLKDLSPLKKHMDVLPREYHQTIFYSDDELELLRGTSLHAVTVQWKTQVASDFRELEEMRLQQPSEAVLTVK--DALVGSLTKEHYLWALGTVWSRFVTV--EREGRPLKAMAPVFDMFNHDPVSETVHGFQESNQCLHLVTLQSWASGSEVKFSYGPLPNSRLLLLHGFCLPSNAFESVELWTTMEPGAPGYAAKQKILEDNGV--DLSKRPFILTDKGLDPRLLPALRVQRATESELKV----VADTPWGESLSARNEAEVCEGLCAALSEMLK 1178
            GY AWA E L +V++  L         +RGV+  D+I   T ++S+P E+L+ + +   +    L  +  REDD L   L+Y R V    S  K+H+DVLP  +H  +++++DE+ +L+G++++ V +Q K QV SDF EL++  L      +      D L+   T E+Y WAL  +WSRFV+V  + E    K+M PVFDMFNHDP ++  HGF  +     L + Q W +GS+V  +YG LPN +LL L+GF LPSN F+ VELW  M   AP Y  K  ++  +G+    +  PF L    L+  LL  LR+QR    EL      VA+  + E +   NE +    L  AL +ML+
Sbjct:    7 GYNAWASEALDIVVNVDLVYEEKSEGGDRGVYVSDEIKPHTTILSIPAESLLNVHTMTQSALRDLASLPLREDDCLAWFLIYERFV-NPQSKWKRHLDVLPHSFHNILYFTEDEINMLQGSNVYYVALQLKQQVVSDFAELQQTLLPDTLRLLHAEHSADVLMAVFTLENYKWALSVIWSRFVSVALDAEDNLAKSMVPVFDMFNHDPHAQMSHGFDPTTNAFVLRSHQHWTAGSQVCINYGALPNHKLLTLYGFVLPSNPFDVVELWAPMSDDAPYYNRKLALMTGHGLADHATAAPFELYPDSLNDELLAYLRIQRLDVGELSSDLIEVANFAF-EPVHDDNEKDTLTALIYALQQMLE 365          
BLAST of mRNA_P-littoralis_Contig125.83.1 vs. uniprot
Match: W4G0U4_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G0U4_9STRA)

HSP 1 Score: 230 bits (587), Expect = 4.160e-63
Identity = 135/369 (36.59%), Postives = 204/369 (55.28%), Query Frame = 3
Query:  126 GYLAWAEEELGVVIHHKLRVSSTPGREERGVFCEDDIPADTIVVSVPWETLMTIDSAKGTPFEGLMEVGAREDDVLCLLLLYHRHVLKDLSPLKKHMDVLPREYHQTIFYSDDELELLRGTSLHAVTVQWKTQVASDFRELEEMRLQQPSEAVLT----VKDALVGSLTKEHYLWALGTVWSRFVTVEREGRP----------LKAMAPVFDMFNHDPVSETVHGFQESNQCLHLVTLQSWASGSEVKFSYGPLPNSRLLLLHGFCLPSNAFESVELWTTMEPGAPGYAAKQKILEDNGV--DLSKRPFILTDKGLDPRLLPALRVQRATESEL-KVVADTPWG--ESLSARNEAEVCEGLCAALSEML 1175
            GY AWA E L + ++  L    T    +RGV+  D+I A T ++S+P  +L+ + +   +    L+ +  REDD L   L+Y R V    S  K+H+DV+P+ +H  +++++DE+ +L+G++++ V +Q K QVASDF EL+   L  P+   L       D L+   T E+Y WAL  +WSRFV++                +K+M PVFDMFNHDP ++  HGF  +     L + Q W +GS+V  +YG LPN +LL L+GF LPSN F+ VELW  M    P Y  K  +L  +G+    +  PF L    ++  LL +LR+QR T++EL +  + TP    E +   NE +    L  AL +ML
Sbjct:    7 GYNAWAAEALDIAVNADLVYEETSEGGDRGVYISDEIQAQTTILSIPAASLLNVHTMAQSVLRDLVSLPLREDDCLAWFLIYERFV-NPQSKWKRHLDVMPQAFHNILYFTEDEINMLQGSNVYYVALQLKQQVASDFGELQRTLL--PTTLRLLHADHSADDLIRVFTIENYKWALSVIWSRFVSIAIHATAADXXXXXXAAVKSMVPVFDMFNHDPFAQMSHGFDPTTNSFVLRSHQHWPAGSQVYMNYGALPNHKLLTLYGFVLPSNPFDVVELWAPMHEDVPSYDRKLALLTAHGLAEHATSTPFDLYSDSVNDELLASLRIQRLTDTELSQFESGTPHFAFEPIHDDNEKDTLTALIYALQQML 372          
BLAST of mRNA_P-littoralis_Contig125.83.1 vs. uniprot
Match: A0A485L3E1_9STRA (Aste57867_15011 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3E1_9STRA)

HSP 1 Score: 224 bits (570), Expect = 6.610e-61
Identity = 131/360 (36.39%), Postives = 204/360 (56.67%), Query Frame = 3
Query:  126 GYLAWAEEELGVVIHHKLRVSSTPGREERGVFCEDDIPADTIVVSVPWETLMTIDSAKGTPFEGLMEVGAREDDVLCLLLLYHRHVLKDLSPLKKHMDVLPREYHQTIFYSDDELELLRGTSLHAVTVQWKTQVASDFRELEEMRLQQPSEAVLTVKD----ALVGSLTKEHYLWALGTVWSRFVTVEREGRPL-KAMAPVFDMFNHDPVSETVHGFQESNQCLHLVTLQSWASGSEVKFSYGPLPNSRLLLLHGFCLPSNAFESVELWTTMEPGAPGYAAKQKILEDNGV--DLSKRPFILTDKGLDPRLLPALRVQRATESELKVVADTPWG---ESLSARNEAEVCEGLCAALSEML 1175
            GY AWA E+L + +   L         +RGV+  +DI   T V+S+P E+L+ + +   +P + L+ +   EDD+L   L+Y    L   S  K+H+DVLP+ +H  ++++ DE+++L G++++ V +Q + QVASDF  L++  L  P    L   D     L+ + +  HY WAL  +WSRFV+V  +   L K+M PVFDMFNHDP ++  HGF  +     L T Q W++GS++  +YG LPN +LL L+GF L SN F++VEL+  M   AP ++ K ++LED+G+   ++  PF L    ++  LL  LR+QR    +L+  A        E +   NE +    L  AL +ML
Sbjct:    7 GYNAWAAEKLDIAMSVDLVYEEKTEGGDRGVYVSEDILPQTTVLSIPAESLLNVHTMAQSPLKDLLSLPLCEDDMLAWFLMYETF-LNPSSKWKRHLDVLPKTFHNILYFTQDEIDMLEGSNVYYVAMQLQKQVASDFAALQQTLL--PDTLRLLSADFSAETLLDAFSMNHYKWALSVIWSRFVSVALDEDILAKSMVPVFDMFNHDPTAQMTHGFDPTTNSFVLRTHQHWSAGSQIFINYGALPNHKLLPLYGFVLASNPFDAVELYAPMGEDAPDFSRKLELLEDHGLAEHVAGVPFELFADSVNDELLAYLRIQRLDGGDLRSAAVEKSHFAFELVHDDNEKDALASLIYALQQML 363          
BLAST of mRNA_P-littoralis_Contig125.83.1 vs. uniprot
Match: A0A1V9ZQM5_9STRA (SET domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQM5_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.070e-60
Identity = 126/356 (35.39%), Postives = 195/356 (54.78%), Query Frame = 3
Query:  126 GYLAWAEEELGVVIHHKLRVSSTPGREERGVFCEDDIPADTIVVSVPWETLMTIDSAKGTPFEGLMEVGAREDDVLCLLLLYHRHVLKDLSPLKKHMDVLPREYHQTIFYSDDELELLRGTSLHAVTVQWKTQVASDFRELEEMRLQQPSEAVLT--VKDALVGSLTKEHYLWALGTVWSRFVTVEREGRPL-KAMAPVFDMFNHDPVSETVHGFQESNQCLHLVTLQSWASGSEVKFSYGPLPNSRLLLLHGFCLPSNAFESVELWTTMEPGAPGYAAKQKILEDNGVDLSKR-PFILTDKGLDPRLLPALRVQRATESELKVVADTPWG-ESLSARNEAEVCEGLCAALSEMLK 1178
            GY +WA   L + ++  L         +RGV+  ++I A T ++S+P+ +L+ +     +P   +  +  REDD L   L+Y    L   S   +H+ VLP+ +H  +++S  E+E L+G++++ V +Q + QV SDF EL+   L +   +++     DA++ + T E+Y WAL  +WSRFV+V      + K M PVFDMFNH+P ++  HGF   + C  L + Q W +GS+V  +YG LPN +LL L+GF LP N ++ VELW  M P AP Y  K    E +G+    R PF LT  G++  LL  LR+QR    +L     + +  + L   NE      L  AL +ML+
Sbjct:    7 GYNSWAVNTLDIALNADLVYEEKSQGGDRGVYISEEIKAHTPILSIPFSSLLNLYCIAESPLREIPHLHEREDDCLAWFLIYETF-LNPKSKWDRHIAVLPKTFHNILYFSQKEIEELQGSNVYYVALQLQQQVTSDFEELKVNILPETLRSLVGDHSADAVLEAYTIENYKWALSVIWSRFVSVATSSDTMVKCMVPVFDMFNHNPTAQMAHGFNPRSNCFVLQSHQYWEAGSQVFINYGALPNHKLLTLYGFVLPENPYDCVELWAPMSPDAPYYKRKMSFFESHGLGHHSRVPFELTTLGINEDLLAYLRIQRMEVEDLSSFEGSSFAYQPLGDENEKSTLTALIFALQQMLE 361          
BLAST of mRNA_P-littoralis_Contig125.83.1 vs. uniprot
Match: A0A8K1C412_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C412_PYTOL)

HSP 1 Score: 203 bits (517), Expect = 2.290e-53
Identity = 120/337 (35.61%), Postives = 185/337 (54.90%), Query Frame = 3
Query:  126 GYLAWAEEELGVVIHHKLRVSSTPGREERGVFCEDDIPADTIVVSVPWETLMT-------------------IDSAKGTPFEGLMEVGAREDDVLCLLLLYHRHVLKDLSPLKKHMDVLPREYHQTIFYSDDELELLRGTSLHAVTVQWKTQVASDFRELEEMRLQQPSEAVLTVK-----DALVGSLTKEHYLWALGTVWSRFVTVEREGRPL-KAMAPVFDMFNHDPVSETVHGFQESNQCLHLVTLQSWASGSEVKFSYGPLPNSRLLLLHGFCLPSNAFESVELWTTMEPGAPG-YAAKQKILEDNGVDLSKRPFILTDKGLDPRLLPALRVQ 1058
            GY  WA + LG+ +     V       ERGVF  +DI   T V+S+P  +L+T                   +++ + +P +G+ +V   EDDVL   LLY R + +D S   +H+ +LP  YH  ++++D E+E+L+G+++  +  Q KT V + F  L++      ++AV+T       + +    + E+Y WAL T+WSRFV+++       KAMAPVFDM NHDP +E  H F    Q   L + Q W++GS++  +YG L N +LL L+GF LP N F++VE+W  M+P +   +  K K+LE+  VD    PF LT   LD  LL  +R+Q
Sbjct:   18 GYNEWAADGLGITLCTDF-VYDVDEDGERGVFIAEDIAPQTQVLSIPLGSLLTTLWVEQQHEDAVYARVLSWVEAQESSPEDGV-DV---EDDVLATTLLYERFIARDKSKWWRHLQLLPTTYHNALYFTDKEVEMLQGSTVCYIAQQMKTNVDAGFARLKQTLFADIADAVVTHHPERSIEQVEACFSLENYKWALSTIWSRFVSLQIASATFRKAMAPVFDMLNHDPDAEMSHHFDTETQTFQLTSYQHWSAGSQLCINYGALSNHKLLTLYGFVLPENPFDAVEMWLPMDPSSTSEFETKVKLLEEIDVDHEVTPFELTVDELDELLLIVMRIQ 349          
BLAST of mRNA_P-littoralis_Contig125.83.1 vs. uniprot
Match: A0A0W8CD61_PHYNI (Ribosomal N-lysine methyltransferase set10 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CD61_PHYNI)

HSP 1 Score: 203 bits (517), Expect = 2.630e-53
Identity = 137/401 (34.16%), Postives = 206/401 (51.37%), Query Frame = 3
Query:   78 MAEAVDRSATAVSLDE--GYLAWAEEELGVVIHHKLRVSSTPGR--EERGVFCEDDIPADTIVVSVPWETLMTIDSAKGTPFEGLMEVG-------AREDDVLCLLLLYHRHVLKDLSPLKKHMDVLPREYHQTIFYSDDELELLRGTSLHAVTVQWKTQVASDFRELEEMRLQQPSEAV---LTVKDALVGSLTKEHYLWALGTVWSRFVTVEREGRP---------------LKAMAPVFDMFNHDPVSETVHGFQESNQCLHLVTLQSWASGSEVKFSYGPLPNSRLLLLHGFCLPSNAFESVELWTTM-EPGAPGYAAKQKILEDNGVDLSKRPFILTDKGLDPRLLPALRVQRA---TESELKVVADTPW-GESLSARNEAEVCEGLCAALSEMLK 1178
            MA   D S   +S D   GY  WA E L V I       +  G    ERGVF  +D+   T V S+P ++++++ S +      L  +         REDD L L LLY + V  D S   KH+++LP+ YH  +++  +E++ L G++L  +  Q + +VA+D+  L+E  L +  E +   +TV D      + ++Y WAL T+WSRFV++  +  P                KAM PVFDM NHDP +E  H F    Q   LV+ Q W +G+++  +YGPL N +LLLL+GF +  N F++VE+W  M E     Y  K++ L  NG+D +  PF L  +  +  LL A R+Q     T  E +++A+    GE +S  NE E    L   L +ML+
Sbjct:    1 MAPEHDESVETLSGDAFVGYNEWAAETLKVRIATDFVYETQDGACASERGVFIAEDVTPHTEVFSIPLDSVLSVKSLQ--EISALQNIAFFQQLTPEREDDQLALALLYEKFVQGDKSKWAKHIELLPKTYHNALYFEQEEIKALEGSNLFFIAQQMEKKVAADYTSLKETVLLELFENITEGITV-DLFDDFFSLDNYKWALSTIWSRFVSLRLDEAPSSKDSSSSVPVAKQSFKAMVPVFDMLNHDPEAEMSHFFDMDTQLFKLVSHQHWNAGTQMFINYGPLSNHKLLLLYGFVIIGNPFDAVEMWLPMDEASTKFYLEKEQFLLINGLDHATNPFELVAEETNDLLLMATRIQEIDCETVEEFEILANKALDGEMVSLENEQEALTRLIYTLEKMLE 398          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.83.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFS9_ECTSI3.750e-21973.44SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KQN9_9PHAE3.380e-8979.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6G0WXU3_9STRA1.250e-6538.16Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9YVA9_9STRA8.290e-6538.31SET domain-containing protein n=1 Tax=Achlya hypog... [more]
A0A024UBV8_9STRA3.200e-6337.40SET domain-containing protein n=2 Tax=Aphanomyces ... [more]
W4G0U4_9STRA4.160e-6336.59Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
A0A485L3E1_9STRA6.610e-6136.39Aste57867_15011 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9ZQM5_9STRA1.070e-6035.39SET domain-containing protein n=1 Tax=Thraustothec... [more]
A0A8K1C412_PYTOL2.290e-5335.61Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0W8CD61_PHYNI2.630e-5334.16Ribosomal N-lysine methyltransferase set10 n=9 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig125contigP-littoralis_Contig125:323441..332750 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LFS9
Preferred nameSETD4
PFAMsRubis-subs-bind,SET
Model size2925
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K05662,ko:K19199
KEGG TC3.A.1.210
KEGG ReactionR03875,R04866,R04867
KEGG Pathwayko00310,ko02010,map00310,map02010
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018026,GO:0018193,GO:0018205,GO:0019538,GO:0022613,GO:0031974,GO:0031981,GO:0032259,GO:0036211,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0070013,GO:0071704,GO:0071840,GO:0140096,GO:1901564
Exons7
Evalue2.91e-227
EggNOG OGsKOG1337@1|root,KOG1337@2759|Eukaryota
Ec32 ortholog descriptionSET domain and Rubisco LSMT substrate-binding domain protein
Ec32 orthologEc-01_001070.1
EC2.1.1.43
Descriptionpeptidyl-lysine monomethylation
Cds size1380
COG categoryI
BRITEko00000,ko00001,ko01000,ko02000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig125.83.1prot_P-littoralis_Contig125.83.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig125 323518..331282 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789548.5604222-UTR-P-littoralis_Contig125:323440..3235171680789548.5604222-UTR-P-littoralis_Contig125:323440..323517Pylaiella littoralis U1_48UTRP-littoralis_Contig125 323441..323517 +
1680789548.666612-UTR-P-littoralis_Contig125:331282..3327501680789548.666612-UTR-P-littoralis_Contig125:331282..332750Pylaiella littoralis U1_48UTRP-littoralis_Contig125 331283..332750 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789548.577243-CDS-P-littoralis_Contig125:323517..3237121680789548.577243-CDS-P-littoralis_Contig125:323517..323712Pylaiella littoralis U1_48CDSP-littoralis_Contig125 323518..323712 +
1680789548.5966897-CDS-P-littoralis_Contig125:325607..3257941680789548.5966897-CDS-P-littoralis_Contig125:325607..325794Pylaiella littoralis U1_48CDSP-littoralis_Contig125 325608..325794 +
1680789548.607052-CDS-P-littoralis_Contig125:326332..3265231680789548.607052-CDS-P-littoralis_Contig125:326332..326523Pylaiella littoralis U1_48CDSP-littoralis_Contig125 326333..326523 +
1680789548.6182253-CDS-P-littoralis_Contig125:327958..3282701680789548.6182253-CDS-P-littoralis_Contig125:327958..328270Pylaiella littoralis U1_48CDSP-littoralis_Contig125 327959..328270 +
1680789548.6318111-CDS-P-littoralis_Contig125:329361..3295231680789548.6318111-CDS-P-littoralis_Contig125:329361..329523Pylaiella littoralis U1_48CDSP-littoralis_Contig125 329362..329523 +
1680789548.644926-CDS-P-littoralis_Contig125:330422..3307191680789548.644926-CDS-P-littoralis_Contig125:330422..330719Pylaiella littoralis U1_48CDSP-littoralis_Contig125 330423..330719 +
1680789548.6568732-CDS-P-littoralis_Contig125:331246..3312821680789548.6568732-CDS-P-littoralis_Contig125:331246..331282Pylaiella littoralis U1_48CDSP-littoralis_Contig125 331247..331282 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig125.83.1

>prot_P-littoralis_Contig125.83.1 ID=prot_P-littoralis_Contig125.83.1|Name=mRNA_P-littoralis_Contig125.83.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=460bp
MAEAVDRSATAVSLDEGYLAWAEEELGVVIHHKLRVSSTPGREERGVFCE
DDIPADTIVVSVPWETLMTIDSAKGTPFEGLMEVGAREDDVLCLLLLYHR
HVLKDLSPLKKHMDVLPREYHQTIFYSDDELELLRGTSLHAVTVQWKTQV
ASDFRELEEMRLQQPSEAVLTVKDALVGSLTKEHYLWALGTVWSRFVTVE
REGRPLKAMAPVFDMFNHDPVSETVHGFQESNQCLHLVTLQSWASGSEVK
FSYGPLPNSRLLLLHGFCLPSNAFESVELWTTMEPGAPGYAAKQKILEDN
GVDLSKRPFILTDKGLDPRLLPALRVQRATESELKVVADTPWGESLSARN
EAEVCEGLCAALSEMLKVRQEGGLSSSSSSSNGPVAQAQEGRTATTTNAP
PLAPGGGEVEGTEGGPGRSVLPEDRRRAVELLREGEERVLRFCLDWVEDY
RLRMEQQLE*
back to top

mRNA from alignment at P-littoralis_Contig125:323441..332750+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig125.83.1 ID=mRNA_P-littoralis_Contig125.83.1|Name=mRNA_P-littoralis_Contig125.83.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9310bp|location=Sequence derived from alignment at P-littoralis_Contig125:323441..332750+ (Pylaiella littoralis U1_48)
TGGCAGCTGGTAGCGTTGCTCGCGCGGATCCCAGAGCACGCGTGTCACAC TACGGGGCTCGTACAAACGACATACACATGGCAGAGGCAGTGGATCGCTC GGCCACCGCTGTCTCTTTGGATGAAGGGTACCTCGCATGGGCCGAGGAGG AGCTTGGAGTGGTTATCCACCACAAACTGCGGGTGTCCTCCACGCCTGGA CGGGAAGAGAGGGGGGTGTTCTGCGAGGATGATATCCCGGCGGATACCAT CGTGGTGTCAGTGCCGTGGGAGGTGAATGGGGGGCGGGGTAGACAGGGGC GTCGGACACTCTCTCTCTCTATCTCTCTTTCTCTTTCCAGTATTTGTGTA TTTGATTCAAAGAATACACCCATCGAGATTCGAACCCCCACCGTACTCGA AGTATATATACTACGTATTTGAACCGGGCCCTAGATAAGGCTGTGTTCTG TTTCCTCCGCCCGATCTATCCGCACATCAAATGTGAGATCATATAATACT TGAAGTATATACGTACAACTACCAGATACAGCAGGAGCTCCTGAGAGGCA TGCACTCGAATCTCAAACAAACACCCATCCATTGCACCCACAGAACCAGC AGCATAAAACCGGGCTCTGAAGAAGGCAATGTTCTGTTTTCTCGACGCAA TATATTTTCGATATTACGGAGGCTGTCAATTTTAAAGGGCAATGGCCAAA AACGGATGCTCCCGGTCGTATTTCGGCCATTACCGGACGTACCAAAATAC GAAGCGAGGAAAGACCGAACTTGGCCTCATGTGATTTGCCAGCACCAACT TTCACCCGTTCCTGGCCAGAAACGACCGGGTGCACCCGATCCCAGCTACT TTGGTTAAGTTACGCCCGTTTTTGGCCACGTTATGTTCCCCTCCACCAGG CTAGTCGGACAGACCAGCTCCGGACAGAACGACTACTCAAACACCCCGCC CATCTGACGTGGGTTTCGACCAGCACCCACCAGACCAGCCGCCAGCCGCG CAACCTTCACCGCAAAAAGAGGCGCAATTAAATCACACACACACTCATAC GAGTGTATTCACCCACATAACATGGCTTCGTCAAGCGACGGCGACGCTTG TCAGTTTGCCAGCAGGGGCAAACCTTCACGATGATGGCGGCAGTATGTTG AAGCGCCAACGAAATCCAACCAAACGAACCTTGAAGCTACTACTACTTAC TGCTGTTGTGCTGTTGCTTTATCAATTAGTTGCACGAGTATGGCAAAAGT GCATAATAATTTGCCGTTTGAAGCCGAAGCAGCGTCGCTCGACAGCATCA ACACAGCAGTTTCATGAGTGATGTGGTCGCTAGGGTTGCTCACTTCTGTA ACGTCGGCGTGTCAGCGAACATCATGCCCGTGCGCATATGCGACTGACCA GCGTCGCCGTCGCTTGACGAAGCCATGTTATGTGGGTGAATACACTCGTA TGAGTGTGTGTGTGATTTAATTGCGCCTCTTTTTGCGGTGAAGGTTGCGC GGCTGGCGGCTGGTCTGGTGGGTGCTGGTCGAAACCCACGTCAGATGGGC GGGGTGTTTGAGTAGTCGTTCTGTCCGGAGCTGGTCTGTCCGACTAGGCT GGTGGAGGGGAACATAACGTGGCCAAAAACGGGCGTAACCTAACCAAAGT AGCTGGGATCGGGTGCACCCGGTCGTTTCTGGCCAGGAACGGGTGAAAGT TGGTGCTGGCAAATCACATGAGGCCAAGTTCGGTCTTTCCTCGCTTCGTA TTTTGGTACGTCCGGTAATGGCCGAAATAGGACCGGGAGCATCCGTTTTT GGCCATTGCCGAAGGAAAAACATCACTTGCACCCACAGAAATGGGTCGTG GAAATGTAGTGTCCTGCTTGGTCCAATCAAATTTGTACACTGCTGTACAG TACTATATCTGTTTTTACACAGCCGGTTCCCGGAACTATTACGAATCTAT TTACAGTTTCAAACAACACACATATCATGCTATACTGTACAACAAACAGC ACGTATCACACATGCACCCACGTGGACACTCCCCACCCCCCCTCCGCTCC TCTGTTGTTGATCTATGCACCCACGGGGACGCTCCTCACATCCCCCGTCG GCTCTTTCTTTGTTGCATTATTGCTGCACATACAAATGATACGTATGCGC GATCATTTGCGGGTCAGACGCTGATGACGATCGACAGCGCGAAGGGGACG CCGTTCGAGGGATTGATGGAGGTCGGAGCCAGAGAGGACGACGTGTTGTG CCTCCTCCTCCTCTACCACCGCCACGTGCTCAAGGACCTATCTCCGCTCA AGAAGCACATGGACGTCCTCCCGCGGGAGTACCACCAGACCATATTTTAC TCCGGTTTGTGCTTCTTTTTTTTGTTTTGCGTGTGTGCGTGTGTGTGTTC TGCAATCTTGTCTGCCTGTCTCACTGTGTGTCTGTCTGTCTGTCTCTCTG TCTAATTGTCTGTCTGTCTCTATGTACGTTATGGACGGGCCGAGCCTATG TGTATAGTCAATCACGCGAGAGGAGAGTGATGGCGGTAAAAACGTTTGAG AGGAGCTGTCATGTCTGACCGTTCTCGGGTTTATATTGGATTTTTTTTCG GGCGATGGAAAGCCGCTTTTGAGACGATGGAGAGCCGCGGTCGTGATTCT TCTGTTTTCAATTGAACCTCACTCTCGACCGAGAAAAAAATATCTGCTCA ACCCCCCTCCCCCCCCCTCCCCCCTCCTGTTTCCAATGATCGTAAACAAT CGGTCCACCAACCGAGCAAGATGTCCAGCTCCCGcCCCCCCCCCCACCCC TTCCACCGCCCTCCCCGCCCACCCCCTGTAACCCTGTGGATGCTGCTATC CTATCCTTTCCCATCCTATCCTTTCCTGCGTACCTTTTTCAGACGACGAG CTAGAGCTTCTGCGGGGCACGAGCCTGCACGCCGTGACGGTGCAGTGGAA GACCCAGGTGGCCAGTGACTTTCGGGAGCTTGAGGAGATGCGGCTGCAGC AGCCATCGGAGGCAGTCCTGACCGTGAAGGATGCCCTCGTGGGGTCTCTG ACGAAGGAGCACTACCTGTGGGCGCTCGGGACTGTGAGTGACTGATCTGA CTGCGGCTGAGTGAATCTGTGGTGTGGTGTGGTGCGTCAGCCCCGTGGGA GAGACGGCGGCCCCCACTTGCAACACAAGGAAGCACGCCTACATCAGAAA AGCACGACACACGCACGCACACAAACGAGCACAGGGGCACACACGAACAC ACGCACACTCAAGACGAACACTCAAATACATACACACACGACGAACATGC CCACGTACATGCACGCACGCGAACGCACGAAACTATTACAGAAATGTCTA CAGTGTCGTACTTGTAAATATACTTCGTATACATGCAAAGTTCTTCCCGA CGCTCGCAAGTTGTTGTTACACCTGAGTGGTTTTTTTACTGCCGTGCTTT GATGTGTACTTCGAAGGTATCTTGTAGCGTTGCCGTTGTCGCGGCCGTGC CATAGTCCGAGCTGTATGCAATGCAGCCTTACCTGTACAACGTGGACACA GACACGAAATATACATATGTCGGGTCTTGCATGCATTGTGTGATGTGTGT GTGTATGTGCGTGTGTGTGTCGTCATTCCATTTATTCAAGACGTCAGCCT ATACACCGTTCGGTTCATAATAAAATTGGCGCGTCAGCCTGTTGTATATT AAAAAATGCATGAATATCGTGTATCGTACTGGTAAAGCATGAATCGTAGT TTCGAAAAGTGCAAAAAGTGTACCTGGTACATTTTCTTGTTGAGAAAATC CGTCACCGACAAGTGACTTGATTTGGCGCCTTTTCCCCAACCAATCGTCA TTTGAGCGCGAGGAGGGGGGGGGTCCCGTACTTCTAACGAACAGGGGGGG GACTGAGGCACACCCTAGACTTGTACTTCGAAGTATCTATCCACTCCACT CCACTCTCCAATCCACTCCAATCCAATCCACTCCACTCCACTCCACTCTC CAATCCACTCCACTCTCCAATCCAATCCAATCCAATCCAATCCAATCCGA TCCAAACCAATCCAATCCAATCCAATCCACTCCACTCCACTCCAATCCAA TCCACTCCACTCCACTCTCCAATCCACTCCAATCCGCTCCACTCCACTCC ATTCCGATCCAATCCAAGCCACTCCAAGCCACTCCACTCCGATCCACCCC ACTCCAATCCACTCCAATCCACTCTACTCCACTCTCCAATCCACTCCAAT CCACTCTCCAATCCACTCCACTCCAATCCAAACCGATCCAATCCAATAAA ATCCAACCCAATCCAATCCAATCCAATCCACTCCAAGCCACTCCGGTCCA CTCCACTCCAATCCAATCCAATCCAATACAAACCAATACAAACCAATCCA ATACAAACCAATACAAACCAATACAATACAATACAATACAATACAATACA CTACAATACATACAATCTAATCCAATCCAATCCAATCCAATACGACACAC ACAAACACACAAACACAGGTGTGGAGCCGCTTCGTCACGGTCGAGCGCGA AGGCCGCCCGCTCAAGGCCATGGCTCCCGTGTTCGACATGTTCAACCACG ACCCCGTCTCCGAGACGGTGCACGGCTTCCAAGAGTCCAACCAGTGCCTG CACCTGGTGACCCTGCAGAGCTGGGCCTCGGGCAGCGAGGTCAAGTTCTC GTACGGCCCCCTCCCGAACTCCCGGCTGCTGCTGCTGCACGGCTTCTGCC TCCCGAGCAACGCGTTCGAGTCCGTGGAGCTGTGGACGACGATGGAGCCG GGGGCGCCCGGCTACGCCGCGAAGCAGAAGGTTGGTTGGTGCATAAAGAT GTGATTTTGAGTGGGGTGGGGTGGGGTGGGGTTGTTCGTTGGCAAGGTCG GCGTGGAGTGTGTGGTGTGGATGCATACATACATACATACGAAGTACATA CATACATGCGTGCGTCTGTTACTCGACGACAAGGCTGATGCGGCGTGAAA TGTGGATCGGGTGGGGGTTTTGGGGTTGGTTGTTGACAGGCACGTCCGTT TCGCCAAGAGCGAGGTTGGACGTGAGTGCGGTGAGGTAGAGGTGGGCTGG TTTTGAAGAAGCACGCCCGTTTCACGAAAATAGCAACGTCGGCGTTGTGT TGTGTGGTGTGGTTCGGTGTGGATGCGGTGGTGCGGTGTGGTTTGGACGT CGTGGGGTTGTTTGCTCGTGAACAGGCACAAACAAACATGGATCTGTTTC TCACACAAACTTGAAACCATCATTGTGGCCGCTGTTTTCAGAAGCGTTTC TCACTATTCTCTTGCAACAGGAATGTGTTTTCTTGGCGAGGATTTTTGTC CCAAACAAATCCGGAACCGGTGTGTGCAGCACGCACGCTGGTATGATGCA ACAACGTTGTTTTTTGGGCCGCCATATATTTACAAAAGAAAAAGGAGCTC GCTTGGGAAGAGATGGAGAGTAAGTGCGAGACGTCGGAGACAAGCGGCGG TGACCGACAGCCTGTGACGCTTTTTTCTATGCAGTGCGAACAAACTGGCG CCCGGGTCCGATGCGTTTGGTAAAAGGCGTTATCGGTACTACTGCCTCGC CGCGCCGCGCGCTCTTAAGATGCTACGACAATGGACCCGTACACTGTATC ATAGAAACCCCGATATGTATGATACCGGAGATCAACACGCAGCAACATTG ACTCTTCTCTTCTCGAAATACAATTATTCACAAGTACCATATCTGGGGCA ACGCTGCACGTTGGCTGAACCAGACGGCGTGCCGTCGATACCACATTGGG GCAACGCGAATGAGCTGAGGTATATACACGCATGCGAAAAACAGCACTCA AAATCCTTTTTGGCTGTTTTATCATACATGGCAATCCAATGATCCGAGCA CACGCACGCACAAACGCACAGATTCTGGAGGACAACGGGGTGGACCTCTC CAAGAGGCCTTTCATCCTCACGGACAAGGGACTGGACCCGCGGTTGCTCC CGGCGCTGCGGGTACAGAGAGCCACGGAGAGCGAGCTCAAGGTCGTCGCG GACACCCCCTGGGGGGAAAGCTTGAGCGCAAGGGTGAGGTGTTGTACCGT GCGTCTAGCTACTGCTGGGTGTTTGCCTTCTCCTGACCGCAACGAGGAGA CGATGTCTGCTTCTCCGGTACTGCCCTTACACCTACCACACAGCCCGTGG GGGCGCTTTTCTCCCCATTTCTGGATATCTACCTTCTCCGGACCACAATG TTGAGGCATTTTTTTTTGTCTTCTTGTTTTTTTCCCTGTGTGATGAAAAA CGAAAATCAAATGATGATTTTCGTTTTTTCATCTCGAAGGGAAAGACAAG AAGAAGACAAAAACAATAATTGTTTCGTGTGTAGTGGAGGTAAACGGAGC ACCGCCAGCAAGTTAGGGTTGCACATTCCTCCCCGCCGCGCTAAAAAAAT TAGCAAGATAGACCGACTGTACGGAACTCGAACCTCTTGTGCTTTTTGTT CAGCTGCAGCGCGGCATCATGTGGAAAGAGTGCGTGTTTCGTTCGATCGC TCGATGATCGACAATAAATGTGCGTTTCCGCCACCAGTGATGTCCGCTAG TTTTTTTTTTTTTATCGTCGTGTGGTTGTTGCTGTTGTTGTCGTCATTGT TGATCATGTTGTTGCTGCTGCTGTTGAGGTTTCGCCATCCCATGACCACA CCACGCGTGCACACCGCCGAGAAACGGCTCCGCCTTGTCCGTTTTGTTTC AATTTTTATTATGAGTTGTCAAGAGTTGTCCCTTCCTCGCTTCCTCGCCA TGGGATCGACAACGAGAGCGTGCGTCTTGCTTGTCTCCCGTGTGTCTTGC TGTTGCTGCCGTCGTTGTTTGTCATTGCTGTTTGTCCTGGTTATCGTGGT TTCCGTTTTATTCTCCCAACTTCACCACTTGTTCCCCGCGCTGGCTACAT ACGTGAATTATTCACGGCAAATGATGTAATAGAACGAGGCGGAAGTGTGC GAGGGGCTCTGCGCCGCCCTCTCCGAGATGCTCAAAGTCCGACAAGAAGG AGGGCTCTCGTCCTCCTCCTCCTCCAGCAACGGCCCCGTCGCACAGGCAC AAGAAGGACGAACAGCAACAACAACAAACGCGCCTCCTTTGGCTCCCGGG GGAGGAGAAGTAGAAGGGACAGAGGGTGGGCCGGGGCGAAGCGTCTTGCC AGAGGACAGGCGGAGGGCGGTGGAGCTGCTGAGAGAAGGGGAGGAGCGCG TGCTGCGATTTTGCCTAGACTGGGTCGAGGTATGTAGGAGGCGTTTGCGG GGGCCCGGAGTGGGAACGATGTTTGGGGGGGGGGTGTTGGGTGGGGGGTA TTGTGTTTGTGGTGTGCGTGCGTGCGTGCGTGCGTTTATTCTTCGGGCGT GTATTGCATTGTTTTGCGCAGCGAAGATTTTGGCCTTGGAAGTGTTTCAT CCCCCCCGCTTGTGCGTTGTGTGTGTGTGTCGATGCCCTTTCAATCCAGG AATGTCGACACTTGTGCAGCGGTTAAGGTTTCTTCTCGGCACCGCCGTAG ATGTTGGGGTGCTGCCTCCACCGCCTTAAGAACAGATGACCCGTTTTTGT TTTTTTTTTAGATGCAGGAAGGGGGCACACGACTGAGATGAAGACTACGA TTACCCCCGCTTACCCCCGCTCCCCCCCGGTGATGATAATCTGCAGGACT ACAGTACCGGTTGCGGATGGAACAGCAGCTCTCGAGTGAACAACCGTCTT GTAATTGACCGCTTACCCCCCCCCCCCCCCAAAAAAAAAACGATAATGAT CTACAGGACTACCGGTTGCGGATGGAACAGCAGCTCGAGTGAAGAACCGT CTTGTGATTTCACCCTGCTGTCTGCGCAGGGTGTGTGTATGTGCCGCGTC TCTCGCGGGGTCGCTTCGGACCTTTGTTTGAGCGGCATGCCGTCGAACCA ACCCTGGTAGGTAGACCACCACCCCCGCGCGGCACGGTGTTGGACGGCGT CGGCGGTGGGAATCAATTCTGTGGGGGAGTAATCCGCAGTTTTTTTTTTT AACTTACAAAAACATCAATGTGTTCGCCTCTCTCCAGACAAGGATCTGGA GCAGATATTGCAACGAACACAAAGAGTGAAATACGTCTACCAGTGTTTCT ATACTCAGCAACCAGTGTACCGTTGCAGCTCCCCTGAGGGTATCAGGCTC AACAAGACAATTTGGTGGTCGTCTTGTGTGACACACGTTACACCATGAGT TGAGTGTTTACCATCTATATTTGTGCTGTTTGCATCATCCTTGGCATAGT GATGGTGGTGATTTGATGTTTTTCGTGCAGCAGTAGATTTTACGTTCCTA CAGACAAGAACAGGTTTTGAAAGATGTGCGGCGCCGCGGGACAAAACACA GGTGCGCGGCACCGCGGGACAAAATAAGGTGCGCGGCACCGTGGGACAAA ACAAGGTTCGCGGCGCCGCGGGACAAAATAAGGTACGCGGCGCCGCGGGA CAAAATAAGGTACGCGGCGCCGCGGGACAAAATAAGGTACGCGGCGCCGC GGGACAAAATAAGGTGCGCGGCACCGTGGGACAAAACAAGGTTCGCGGCG CCGCGGGACAAAATAAGGTACGCGGCGCCGCGGGACAAAATAAGGTACGC GGCGCCGCGGGACAAAATAAGGTGCGCGGCACCGTGGGACAAAACAAGGT TCGCGGCGCCGCGGGACAAAATAAGGTACGCGGCGCCGCGGGACAAAACA ATCCCGTAATAACACCACCTTTCGGCCCGCCGATTTGTGTGTGTGTCTAC AGAGTGGGTAGAGAGTAGAGGTAGGGCGCAGGTGTGTGGCAAGTGTATAT CAGCAGGCGTCTGACGTTGCAACGGTATGACAGCAGCAGCAGGTCGGTGG TGTCCACAGCCTGTTTGACGGCGACCCCAAATCTATGTTTTGCTCATGTC GAAGGCGTGTTTTTTCACTCAGGACACCCACAACACACGAACAACTTTGG CGTCGAGCGCTGCGAAGGCTCTGCAGCCCTCGCTCAGGCATCAAGTGTGT GTATCAGAGGTGTTCGATGAGTGCACCCGGTTGATGGTTCATGCGCCTGC GACTCGGCGCCGTATCGATGTGTGCTGGAGTAAAGCTACAGTAGTGCTGT GTTGAATTTGGTGCTCGGCCTCTTGGTTGCTCTTGACGTCGATCGCAAAT AATGTAGGTGCGTGTGTGAGCGCGTGTTTTTTTTTTTTTTGTGGGTGGAT TGGGAACGAGTGTTGTCCTGAGTAGTACCAAAATTATCGGGCACTTGTTC GTACCTTGTT
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig125:323441..332750+

>mRNA_P-littoralis_Contig125.83.1 ID=mRNA_P-littoralis_Contig125.83.1|Name=mRNA_P-littoralis_Contig125.83.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1380bp|location=Sequence derived from alignment at P-littoralis_Contig125:323441..332750+ (Pylaiella littoralis U1_48)
ATGGCAGAGGCAGTGGATCGCTCGGCCACCGCTGTCTCTTTGGATGAAGG
GTACCTCGCATGGGCCGAGGAGGAGCTTGGAGTGGTTATCCACCACAAAC
TGCGGGTGTCCTCCACGCCTGGACGGGAAGAGAGGGGGGTGTTCTGCGAG
GATGATATCCCGGCGGATACCATCGTGGTGTCAGTGCCGTGGGAGACGCT
GATGACGATCGACAGCGCGAAGGGGACGCCGTTCGAGGGATTGATGGAGG
TCGGAGCCAGAGAGGACGACGTGTTGTGCCTCCTCCTCCTCTACCACCGC
CACGTGCTCAAGGACCTATCTCCGCTCAAGAAGCACATGGACGTCCTCCC
GCGGGAGTACCACCAGACCATATTTTACTCCGACGACGAGCTAGAGCTTC
TGCGGGGCACGAGCCTGCACGCCGTGACGGTGCAGTGGAAGACCCAGGTG
GCCAGTGACTTTCGGGAGCTTGAGGAGATGCGGCTGCAGCAGCCATCGGA
GGCAGTCCTGACCGTGAAGGATGCCCTCGTGGGGTCTCTGACGAAGGAGC
ACTACCTGTGGGCGCTCGGGACTGTGTGGAGCCGCTTCGTCACGGTCGAG
CGCGAAGGCCGCCCGCTCAAGGCCATGGCTCCCGTGTTCGACATGTTCAA
CCACGACCCCGTCTCCGAGACGGTGCACGGCTTCCAAGAGTCCAACCAGT
GCCTGCACCTGGTGACCCTGCAGAGCTGGGCCTCGGGCAGCGAGGTCAAG
TTCTCGTACGGCCCCCTCCCGAACTCCCGGCTGCTGCTGCTGCACGGCTT
CTGCCTCCCGAGCAACGCGTTCGAGTCCGTGGAGCTGTGGACGACGATGG
AGCCGGGGGCGCCCGGCTACGCCGCGAAGCAGAAGATTCTGGAGGACAAC
GGGGTGGACCTCTCCAAGAGGCCTTTCATCCTCACGGACAAGGGACTGGA
CCCGCGGTTGCTCCCGGCGCTGCGGGTACAGAGAGCCACGGAGAGCGAGC
TCAAGGTCGTCGCGGACACCCCCTGGGGGGAAAGCTTGAGCGCAAGGAAC
GAGGCGGAAGTGTGCGAGGGGCTCTGCGCCGCCCTCTCCGAGATGCTCAA
AGTCCGACAAGAAGGAGGGCTCTCGTCCTCCTCCTCCTCCAGCAACGGCC
CCGTCGCACAGGCACAAGAAGGACGAACAGCAACAACAACAAACGCGCCT
CCTTTGGCTCCCGGGGGAGGAGAAGTAGAAGGGACAGAGGGTGGGCCGGG
GCGAAGCGTCTTGCCAGAGGACAGGCGGAGGGCGGTGGAGCTGCTGAGAG
AAGGGGAGGAGCGCGTGCTGCGATTTTGCCTAGACTGGGTCGAGGACTAC
CGGTTGCGGATGGAACAGCAGCTCGAGTGA
back to top