mRNA_P-littoralis_Contig125.79.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig125.79.3
Unique NamemRNA_P-littoralis_Contig125.79.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: D8LFT0_ECTSI (TFIIH subunit (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT0_ECTSI)

HSP 1 Score: 775 bits (2000), Expect = 6.980e-272
Identity = 503/714 (70.45%), Postives = 544/714 (76.19%), Query Frame = 2 
Query:  146 MAMPGPSLGVGEEVLITVYAVHKKCPGTVWFTTRRALWRAADGKAAVQRVEVPWAAVMSFQCSPASEARAMMRLLRVAEGQPPIIFRFTETPGDTPREVLERAQAAVRKALKGGAEAGNSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKKMKWKTRGGLMGSASGGQSLRHSRDRDSMPGGRMRDVHDARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSGSGSXXXXXXXXXXXXXAISGNKRKSLEAGGGEGGQDDMFLRFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANKRKEVIGKFNRHARLVMQPPDGGGTGAGGGR-PALVDSAESATDLPELRIHQEVSREKLEIANKKRYHGGSNSKLG---GGASNGASARASSQAGPSSWPQSRR--LIGAVTLAEAKAQLGPGFSILGAGRPCVARAVVAPRQALSALRECTKEADKGIGDAFRLQGYEDFIGGMHRHFQIVGELLRHFYASLDRPRSDPGAVAKLARLETRMDSKYKELNKERQGLPRNADGNRLSAVIKPLLDCLDHAFQKLEESKARSGGGG 2269
            M++PGPSLG GEEV++T +AVHKK PGTVWFT+RRALW+AADGKAAVQRVEV WAAV SFQCSPASEARAMMRLLRV EGQPPIIFRFTETPG TPREVLERAQAAVRKALKG A AG S                                  ALKKMKWKTRGGL+G+ASGGQSLRH   RDSMPGGRMR+VHDAR+RAALLAGDEVLTAQYREMVDG VVTEEEFWESRRRTLAE+DAK AS+HTGTPSEMPSDLVAE TSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEM+EKEFWTKYIQSAYFNRDRG     XXXXXXXXXXXXX                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     GRLE+GSVDPMVDLTSQWGDHHAREVDDSDP EE +EAANKRKEV+GKFNRHARLVMQP           R PALVDSA SATD+PELR+ +EV++EKL+IA+K RY GG  +      GG      +  +   G  S PQS R  ++  VTLAEAKAQLGPGFSILG  RP V+ AV +P QA+SAL+ECT+EA +G+GDAF LQG                    HFYASLDRP+SD GA AKL RLETRM+SKYKEL +ER+ LPRNADGNRLSAVIKPLLD LDHAF KLEESK+R GG G
Sbjct:    1 MSVPGPSLGAGEEVVMTAHAVHKKTPGTVWFTSRRALWKAADGKAAVQRVEVAWAAVKSFQCSPASEARAMMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGRSKTGVAEGGTNGTGKGKAGKYGGSSSKD-------ALKKMKWKTRGGLLGTASGGQSLRH---RDSMPGGRMRNVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGXXXXXXXXXXXXXXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLESGSVDPMVDLTSQWGDHHAREVDDSDPTEELSEAANKRKEVVGKFNRHARLVMQPXXXXXXXXXXXRRPALVDSAASATDMPELRLREEVAQEKLDIAHKNRYRGGGGTNRADSNGGXXXXXXSSGALSVGSLSRPQSPRGMVVETVTLAEAKAQLGPGFSILGE-RPRVSGAVASPGQAMSALKECTREASRGVGDAFHLQG--------------------HFYASLDRPKSDAGAAAKLDRLETRMNSKYKELTEERRRLPRNADGNRLSAVIKPLLDSLDHAFLKLEESKSRKGGVG 669
[Close]
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A6H5JXC6_9PHAE (BSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC6_9PHAE)

HSP 1 Score: 651 bits (1679), Expect = 8.340e-224
Identity = 440/653 (67.38%), Postives = 473/653 (72.43%), Query Frame = 2 
Query:  356 MMRLLRVAEGQPPIIFRFTETPGDTPREVLERAQAAVRKALKGGAEAGNSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKKMKWKTRGGLMGSASGGQSLRHSRDRDSMPGGRMRDVHDARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSGSGSXXXXXXXXXXXXXAISGNKRKSLEAGGGEGGQDDMFLRFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANKRKEVIGKFNRHARLVMQPPDGGGTG-AGGGRPALVDSAESATDLPELRIHQEVSREKLEIANKKRYHGGSNSKLGGGASNGASAR----------ASSQAGPSSWPQSRR--LIGAVTLAEAKAQLGPGFSILGAGRPCVARAVVAPRQALSALRECTKEADKGIGDAFRLQGY-EDFIGGMHRHFQIVGELLRHFYASLDRPRSDPGAVAKLARLETRMDSKYKELNKERQGLPRNADGNRLSAVIKPLLDCLDHAFQKLEESKARSGGGG 2269
            MMRLLRV EGQPPIIFRFTETPG TPREVLERAQAAVRKALKG A AG                                    ALKKMKWKTRGGL+G+ASGGQSLRHS     MPGGRMRDVHDAR+RAALLAGDEVLTAQYREMVDG VVTEEEFWESRRRTLAE+DAK AS+HTGTPSEMPSDLVAE TSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEM+EKEFWTKYIQSAYFNRDRG     XXXXXXXXXXXXX                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          G  GG     G            G   +R VDDSDP EE +EAANKRKEV+GKFNRHARLVMQP          G RPALVDSA SATD+PELR+ +EV+R+KL+IA+K RY GG       G +NGA +            +  AG  S PQS R  L+  VTLAEAKAQLGPGFSILG  RP V+ AV +P QA+SAL+ECT+EA +G+GDAF LQGY EDFIG MHRHFQIVGELLRHFYA+LDRP+SD GA AKL RLETRM+SKYKEL +ER+ LPRNADGNRLSAVIKPLLDCLDHAF KLEESK+R GG G
Sbjct:    1 MMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGRIRTGVAEGGTNGAGKGKAGKDGGSSKN--------ALKKMKWKTRGGLLGTASGGQSLRHS-----MPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRRQARERKRGPYGGPDFAVG------------GSPRSRGVDDSDPTEELSEAANKRKEVVGKFNRHARLVMQPXXXXXXXXVTGRRPALVDSAASATDMPELRLREEVARDKLDIAHKNRYRGG-------GGTNGADSXXXXXXXXXXXGAVSAGSLSRPQSPRGMLVETVTLAEAKAQLGPGFSILGE-RPRVSGAVTSPGQAMSALKECTREASRGVGDAFHLQGYPEDFIGSMHRHFQIVGELLRHFYATLDRPKSDAGAAAKLDRLETRMNSKYKELTEERRILPRNADGNRLSAVIKPLLDCLDHAFLKLEESKSRKGGVG 620
[Close]
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A835YZ40_9STRA (BSD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ40_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.190e-62
Identity = 269/691 (38.93%), Postives = 350/691 (50.65%), Query Frame = 2 
Query:  305 WAAVMSFQCSPASEARAMMRLLRVAEGQPPIIFRFTETPGDTPREVLERAQAAVRKALKGGAEAGNSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKKMKWKTRGGLMGSASGGQS--LRHSRDRDSMP----GGRMRDVHD---------------ARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSGSGSXXXXXXXXXXXXXAISGNKRKSLEAGGGEGGQDDMFLRFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANKRKEVIGKFNRHARLVMQPPDGGGTGAGGGRPALVDSAESATDLPELRIHQEVSREKLEIANKKRYHGGSNSKLGGGASNGASA---------------RASSQAG-------PSSWPQSRRLIGAVTLAEAKAQLGPGFSILGAGRPCVARAVVAPRQALSALRECTKEA-DKGIG-DAFRLQGY-EDFIGGMHRHFQIVGELLRHFYASLDRPRSDPGA---VAKLARLETRMDSKYKELNKERQGLPRNADGNRLSAVIKPLLDCLDHAFQ 2230
            W+ V     SPA+ A+AM+++   +    P++ +  ++   T  ++L  A++ + K L+  + AG+S  XXXXXXXXXXXXXXXX                   K K     G  G+  G QS    H R R + P    GGR  D                  A+RRAALLA D VL AQY ++V+GGV+++ EFW  RR  L  + A A ++  G  S + +D V          F+L  R IH IF MYP V +AY+A VP E++EKEFW KY QS Y+ RDRG                  A +G    ++ AG      DDMF RFAA   XXXXXXXXXXXXXXXXXXXXXXXXX           G EG        VDP VDL +Q+ D+H+R VDD  P EE+  AA+ +  VI + NRHA LVM+P  GGG     G P   D   +ATDLPEL        + L +AN  RY          GA  GA+                R S +A        P +   +       T   A A   P  ++     P +ARA+  P +AL  L+ CTKEA   G G  A   + + ++F+  MHRHFQ++GELLRHFYA +        +     +L RL T+M SKY EL   RQGLPR+A G++LS +IKPLLD LD AF+
Sbjct:    3 WSLVKDHMVSPATSAKAMIKVNPTSSAVDPMVIQVLDSGLATAADILATARSTILKVLR--SYAGSSXXXXXXXXXXXXXXXXXXG------------------KAKSLNGDGGEGAPRGAQSWGAGHKRQRTAGPLSGAGGRALDAAAVQPPAXXXXXXAADVAQRRAALLARDAVLRAQYADVVEGGVLSDAEFWAGRRGMLEGEAAAARARRQGARSALGAD-VRPAVEGAKQVFRLTPRDIHQIFLMYPAVERAYKAKVPVELSEKEFWVKYFQSQYYTRDRGGA----------------AKAGGA--TISAG------DDMFSRFAAEYEXXXXXXXXXXXXXXXXXXXXXXXXXRGNSAQQRLS-GTEG--------VDPTVDLAAQFSDYHSRPVDDRGP-EERAGAADAQA-VIERLNRHAALVMRPRAGGG-----GAPH--DDPAAATDLPELHAPAPPPVQPLHLANASRY---------AGAQRGAAXXXXXXXXXXPVVRRKRVSLEATCIKRARPPHTHTHTSLQNNTATHCSAAAPRVPPQAVQ-LREPNLARALPPPARALDVLQACTKEAAGAGAGGSAATAKSFPQEFVTQMHRHFQVIGELLRHFYAGIGGXXXXXXSDIVQKQLHRLVTKMGSKYDELKALRQGLPRDAQGSQLSTLIKPLLDSLDDAFE 620
[Close]
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A2P4XBN0_9STRA (General transcription factor IIH subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XBN0_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.990e-21
Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 2 
Query:  731 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 1108
            + ++RAALLA +  L  Q+ EMV+ G+++EE+FW SRR  +A + +K   + TG  S + +DL A+      +K+ LNA  IH IF  YP V+ AYQ  VP +MTE EFW  + +S YF+RDR +G
Sbjct:  123 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNEGGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAG 246
[Close]
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A421FK41_9STRA (BSD domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FK41_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.490e-20
Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 2 
Query:  731 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 1108
            + ++RAALLA +  L  Q+ EMV+ G+++EE+FW SRR  +A + +K   + TG  S + +DL A+  + G + K+ LNA  IH IF  YP V+ AYQ  VP +MTE EFW  + +S YF+RDR +G
Sbjct:  102 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAG 226
[Close]
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A7S4DB33_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB33_HETAK)

HSP 1 Score: 104 bits (259), Expect = 1.830e-20
Identity = 89/296 (30.07%), Postives = 128/296 (43.24%), Query Frame = 2 
Query:  818 EEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSGSGSXXXXXXXXXXXXXAISGNKRKSLEAGGGEGGQDDMFLRFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANKRKEVIGKFNRHARLVMQPPDGGGTGAGGGRPALVDSAE---SATDLPELRIHQEVSREKLEIANKKRYHG 1696
            E +FW +R++ +A++ A   ++ TG PS + +    E  ++   KF L AR I  IF MYP V + Y+A VP EM+EKEFW KY QS +F RD G                  A + +++ S        GQDDMF RF A                                             +L+   VDP +DLT+   D+H    D   P  +      K   VI KFNRHA+LV+ PP    +     +    D A+     T+L ELR  +  + + L + NK++Y G
Sbjct:    1 EADFWAARQKQMADEQASVNAQTTGIPSTL-NLFQTEHITSRHKKFVLTARMIRHIFLMYPAVERCYKAKVPEEMSEKEFWVKYFQSQFFLRDSG------------------AETPDEKNSH-------GQDDMFTRFEAEEIENEKKKQSRKSAAPHSNGNNAKKQ------------------KLDV-EVDPSIDLTATENDYHPPSTDKLFPTGDPNSKGAK---VIDKFNRHAKLVLDPPS---SDISNKQRKHYDKAKIFGEGTELLELRKEEPPAYDPLNLKNKEQYFG 245
[Close]
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A662X0X0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X0X0_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.750e-20
Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 2 
Query:  731 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 1108
            + ++RAALLA +  L  Q+ EMV+ G+++EE+FW SRR  +A + +K   + TG  S + +DL  +  + G + K+ LNA  IH IF  YP V+ AYQA VP +MTE EFW  + +S YF+RDR +G
Sbjct:  150 EIKQRAALLAANPTLKRQHTEMVNDGLISEEDFWASRRHLIAAEASKR--QKTGKTSAILTDLAGDNDTGGNVVKYNLNAEVIHQIFIQYPAVYMAYQAQVPDKMTETEFWGAFFKSKYFHRDRKAG 274
[Close]
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A0P1APW3_PLAHL (General transcription factor iih n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APW3_PLAHL)

HSP 1 Score: 106 bits (264), Expect = 3.150e-20
Identity = 58/127 (45.67%), Postives = 82/127 (64.57%), Query Frame = 2 
Query:  731 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 1108
            + ++RAALLA +  L  Q+ EMV+ G+++EE+FW SRR  +A + +K   + T   S + +DL A   S G + K+ LNA  IH IFT YP V+ AYQ  VP +MTE EFW  + +S YF+RDR +G
Sbjct:  124 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTAKTSAILTDLAANNDSGGNVVKYNLNAEVIHQIFTQYPAVYMAYQEQVPDKMTETEFWGAFFKSKYFHRDRKAG 248
[Close]
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A0X7YIL8_GLOUL (Putative general transcription factor IIH subunit (Fragment) n=19 Tax=Globisporangium TaxID=1448052 RepID=A0A0X7YIL8_GLOUL)

HSP 1 Score: 103 bits (258), Expect = 3.640e-20
Identity = 57/127 (44.88%), Postives = 82/127 (64.57%), Query Frame = 2 
Query:  731 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 1108
            + ++RAALLA +  L  Q+ EMV+ G+++EE+FW SRR  +A + +K   + TG  S + +DL  +  + G + K+ LNA  IH IF  YP V  AYQA VP +MTE EFW  + +S YF+RDR +G
Sbjct:   37 EIKQRAALLAANPTLKRQHTEMVNEGLISEEDFWASRRHLIANEASKR--QKTGKTSAILTDLSGDNDTGGNVVKYNLNAEVIHQIFIQYPAVHLAYQAQVPDKMTETEFWGAFFKSKYFHRDRKAG 161
[Close]
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A3F2RJ52_9STRA (BSD domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJ52_9STRA)

HSP 1 Score: 107 bits (266), Expect = 3.660e-20
Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 2 
Query:  731 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 1108
            + ++RAALLA +  L  Q+ EMV+ G+++EE+FW SRR  +A + +K   + TG  S + +DL A+  + G + K+ LNA  IH IF  YP V+ AYQ  VP +MTE EFW  + +S YF+RDR +G
Sbjct:  123 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAG 247
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFT0_ECTSI6.980e-27270.45TFIIH subunit (Partial) (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JXC6_9PHAE8.340e-22467.38BSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YZ40_9STRA1.190e-6238.93BSD domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A2P4XBN0_9STRA1.990e-2144.44General transcription factor IIH subunit (Fragment... [more]
A0A421FK41_9STRA1.490e-2044.88BSD domain-containing protein n=2 Tax=Phytophthora... [more]
A0A7S4DB33_HETAK1.830e-2030.07Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A662X0X0_9STRA2.750e-2044.88Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A0P1APW3_PLAHL3.150e-2045.67General transcription factor iih n=1 Tax=Plasmopar... [more]
A0A0X7YIL8_GLOUL3.640e-2044.88Putative general transcription factor IIH subunit ... [more]
A0A3F2RJ52_9STRA3.660e-2044.88BSD domain-containing protein n=1 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig125contigP-littoralis_Contig125:313899..323296 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LFT0
PFAMsBSD,PH_TFIIH
Model size2270
Max annot lvl2759|Eukaryota
KEGG koko:K03141
KEGG Pathwayko03022,ko03420,ko05203,map03022,map03420,map05203
KEGG ModuleM00290
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0000439,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005675,GO:0006139,GO:0006259,GO:0006281,GO:0006351,GO:0006355,GO:0006357,GO:0006360,GO:0006366,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016310,GO:0016591,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0030880,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032774,GO:0032806,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070816,GO:0071704,GO:0080090,GO:0090304,GO:0090575,GO:0097659,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902494,GO:1902554,GO:1902911,GO:1903506,GO:1990234,GO:2000112,GO:2001141
Exons11
Evalue1.99e-273
EggNOG OGsKOG2074@1|root,KOG2074@2759|Eukaryota
Descriptionphosphorylation of RNA polymerase II C-terminal domain
Cds size2124
COG categoryK
BRITEko00000,ko00001,ko00002,ko03021,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig125.79.3prot_P-littoralis_Contig125.79.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig125 313899..323151 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789548.4077206-CDS-P-littoralis_Contig125:313898..3141331680789548.4077206-CDS-P-littoralis_Contig125:313898..314133Pylaiella littoralis U1_48CDSP-littoralis_Contig125 313899..314133 -
1680789548.425144-CDS-P-littoralis_Contig125:315000..3150601680789548.425144-CDS-P-littoralis_Contig125:315000..315060Pylaiella littoralis U1_48CDSP-littoralis_Contig125 315001..315060 -
1680789548.4371006-CDS-P-littoralis_Contig125:315846..3161571680789548.4371006-CDS-P-littoralis_Contig125:315846..316157Pylaiella littoralis U1_48CDSP-littoralis_Contig125 315847..316157 -
1680789548.4490943-CDS-P-littoralis_Contig125:317280..3174101680789548.4490943-CDS-P-littoralis_Contig125:317280..317410Pylaiella littoralis U1_48CDSP-littoralis_Contig125 317281..317410 -
1680789548.460243-CDS-P-littoralis_Contig125:318002..3180881680789548.460243-CDS-P-littoralis_Contig125:318002..318088Pylaiella littoralis U1_48CDSP-littoralis_Contig125 318003..318088 -
1680789548.4719703-CDS-P-littoralis_Contig125:318334..3187701680789548.4719703-CDS-P-littoralis_Contig125:318334..318770Pylaiella littoralis U1_48CDSP-littoralis_Contig125 318335..318770 -
1680789548.4827614-CDS-P-littoralis_Contig125:319606..3197941680789548.4827614-CDS-P-littoralis_Contig125:319606..319794Pylaiella littoralis U1_48CDSP-littoralis_Contig125 319607..319794 -
1680789548.490989-CDS-P-littoralis_Contig125:320491..3206301680789548.490989-CDS-P-littoralis_Contig125:320491..320630Pylaiella littoralis U1_48CDSP-littoralis_Contig125 320492..320630 -
1680789548.5030615-CDS-P-littoralis_Contig125:321009..3210991680789548.5030615-CDS-P-littoralis_Contig125:321009..321099Pylaiella littoralis U1_48CDSP-littoralis_Contig125 321010..321099 -
1680789548.5113678-CDS-P-littoralis_Contig125:322302..3225681680789548.5113678-CDS-P-littoralis_Contig125:322302..322568Pylaiella littoralis U1_48CDSP-littoralis_Contig125 322303..322568 -
1680789548.521475-CDS-P-littoralis_Contig125:322968..3231511680789548.521475-CDS-P-littoralis_Contig125:322968..323151Pylaiella littoralis U1_48CDSP-littoralis_Contig125 322969..323151 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789548.5315242-UTR-P-littoralis_Contig125:323151..3232961680789548.5315242-UTR-P-littoralis_Contig125:323151..323296Pylaiella littoralis U1_48UTRP-littoralis_Contig125 323152..323296 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig125.79.3

>prot_P-littoralis_Contig125.79.3 ID=prot_P-littoralis_Contig125.79.3|Name=mRNA_P-littoralis_Contig125.79.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=708bp
MAMPGPSLGVGEEVLITVYAVHKKCPGTVWFTTRRALWRAADGKAAVQRV
EVPWAAVMSFQCSPASEARAMMRLLRVAEGQPPIIFRFTETPGDTPREVL
ERAQAAVRKALKGGAEAGNSSVGGGAGAAEGAGVGGSSKGAAKGKGGKDG
AKGGALKKMKWKTRGGLMGSASGGQSLRHSRDRDSMPGGRMRDVHDARRR
AALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGT
PSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMT
EKEFWTKYIQSAYFNRDRGSGSGSSGGGGANSGSTSSAISGNKRKSLEAG
GGEGGQDDMFLRFAAQEAEREKKEKEEGGGAAGAKRARAAAAAAAAAGAG
GAAAGVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANK
RKEVIGKFNRHARLVMQPPDGGGTGAGGGRPALVDSAESATDLPELRIHQ
EVSREKLEIANKKRYHGGSNSKLGGGASNGASARASSQAGPSSWPQSRRL
IGAVTLAEAKAQLGPGFSILGAGRPCVARAVVAPRQALSALRECTKEADK
GIGDAFRLQGYEDFIGGMHRHFQIVGELLRHFYASLDRPRSDPGAVAKLA
RLETRMDSKYKELNKERQGLPRNADGNRLSAVIKPLLDCLDHAFQKLEES
KARSGGGG
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mRNA from alignment at P-littoralis_Contig125:313899..323296-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig125.79.3 ID=mRNA_P-littoralis_Contig125.79.3|Name=mRNA_P-littoralis_Contig125.79.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=9398bp|location=Sequence derived from alignment at P-littoralis_Contig125:313899..323296- (Pylaiella littoralis U1_48)
TCACACGCTCCGACCGTCCGCCACTGTTGTGCTGTGCTGTGTGCTGTCTA
TCTCGGTCTGGGGGCTGTGATTGCATGCTCGCAGCAACAGAGTAGAACGG
AGTGCTCGTTACGTGTGTTTCCTTTGACAGTGAGCACAAAGAACCATGGC
CATGCCGGGACCTTCGCTAGGCGTGGGAGAAGAGGTGCTCATCACTGTGT
ACGCCGTGCACAAGAAATGTCCAGGAACGGTGTGGTTTACGACACGGAGG
GCACTGTGGAGAGCAGCGGATGGGAAGGCCGCTGTTCAGCGCGTAGAGGT
TCCCTGGGCAGCAGTCATGAGCTTTCAGGTGGGTTGCGCGGGTGGCTACA
GCAGTATTTGTGTGGGTAGGGTGTCTGTGCGGTTTGCGTTCGCACAGCAG
TTGTGTGACCGCTTGTTCGCGCATTGATTTTGGATTGCGCGGCAGCGGTC
TTTTGGTTGCTGTCTGTAACGCCTTTTGGAACATATCCGCCGAGCAAACC
GGTTCCCCCAAATCGCTGTGTGTAGGGTACACTTTCACCCACTACTACAT
ACGAGTATGCAGCGTGTGTGTTATTTGAAACCACGGCCAATCGCACCCCC
CTGGCTCGTGCCAACAATGACTCCATGTCGGAATTCTCAACAACCATGCT
GTGTAGTATTATTTTTCTCTTTTTCTCTCCTTGTCCATGCCTTATCTTTC
GCCCTATCTCTCCATCTGTCCCTCTCAGTGCTCCCCGGCGAGTGAGGCCC
GAGCCATGATGCGCCTCCTGAGAGTTGCCGAGGGCCAACCCCCTATCATA
TTTCGATTCACGGAGACCCCAGGCGACACGCCGAGAGAGGTCCTGGAGAG
GGCGCAGGCGGCAGTGCGGAAGGCGCTCAAAGGGGGTGCGGAAGCGGGAA
ACAGCAGTGTCGGGGGGGGGGCGGGGGCGGCGGAGGGTGCAGGGGTCGGT
GGTAGCAGCAAAGGGGCGGCAAAGGGAAAGGGCGGCAAAGATGGGTACGT
TTCGAGGCTAAGATGGTGTATACTTCGAAGTCTATGATACGTGTGTTTTT
CCCATTGATTCTGGCGCCAGTCTTTACCCTTAATTAAGGTGATATCCTTG
ACGTTCAGCTGGGGCGAGGAAACGGGCGGGGGGTGGGGGGGCGCGAATCA
TTAGTTATCTGCCCCTGCCCCACCCCCCCCCTGGACGGATGTTTACAGGC
CGATTGCTCGTACTCGGTGACGAATAGAGTGCCAAAACCAAACACGATAT
ATCATACGTTTTCGAAAAGCTCTCGACGGGATGTTTAGATATTCTCAACG
CCACCATATCGGCACTGACACGCTTCTTCTTGCTGAGGGGTGATCAAGCT
TTCAGCACCAGTATACGTAAGGGGTGCGGTATCTTACGTGAACCTGCGGC
AGGAGGAGAAACGGTGCTGCCCCGTCTCGAAGGGGTGCATGCTTGAGCAA
TCGTCAAAAGTACACACAGCAGTACCTTCTGCCACCTATGAAAATCGAGT
CGAACGGGGGGGTGGGGGAGGGGTATTCTTTGTTGCTCGCCTTTGAATCG
GTGACCAATAACCACGGATCTCCTTCGAGACAGAGTGCTGTTCGTTCCTA
GTTCCTACTCCAAATAGAGCGACAACCACGTCAACACCAACATTTCCGAG
CTCTAATCGCTTGGGGTTGGGATGGAGACGGTCTATTGCCCTCAAGGCAG
GGAGCATGTAGGAGCATGCGTACGTATATACATATGGGTGGCTGCTGCTT
GGCAGACTTTCTCCGAAGCGAAAGCATGGACGGGTAAAGGAGGATGGAGC
ACGCGTTTGTATGTAAGGGGTGCGTGATGTATCGTCCAATCGGCCGTTTT
AGGGAGTGAAGTTGGATGAGCCCGAAAACGGGGATGGAAAGATGGTGCTG
TGGTAGCTGAAATGCTGGTATGAGCGTATCCCCAACGAAAAGCAACGCCA
CCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACC
ACCACCAACAACAACATCAGCATATCCATCACTAGCGACAACATCGAAAG
CAGCAATACAACGATAACAACAACAATAACAACAAACAACAACAGTAACA
CCCAAACACCAAAACACTTGCACAACATGTTTCGGTCGCGGGCCATGCAT
GTTCCCTTCTCAAACGGTAACTCTTCGCTGCTGGTGTTGGCTACCAGAGC
CAAGGGCGGCGCGTTGAAGAAGATGAAGTGGAAGACGAGGGGCGGTCTCA
TGGGATCTGCCTCGGGGGGACAGTCTCTTCGCCACAGGTATTATGCTTCG
TACAGTATAACGCACGTGACGCCGTCGTTATCCTCGATTGCCTGCGATAT
CACACAATCATACATGTGTATGTTTGTTTTTTTTATCACTTGTGAAAGAG
AAAAGCACCAACACACCTGTTGCTTGTATCGGGAGGGGGAGACGTGACAG
CATGTGCATGTGATAATACTGTTCTGTACGTCAGCAGCAGTTGTACAACC
CCTTTTTTACCCTTGTTTGTCTTGTGATGATGTGTTATTGCCCATGTTGT
TCGTCTGCCGTCTGCTCTTCCTCCTCTTCTCCCGCTGGCTGCTGCTGCTG
CTCCGGCGTTTGTCGCCTGGTGCGCACAACAACAACATCAACAACATCAA
CAACAACAACAAAAAGTCGAGACAGGGACAGCATGCCCGGGGGGCGGATG
CGCGACGTCCACGACGCTCGTCGGAGAGCGGCACTGCTGGCGGGGGACGA
GGTCCTAACGGCCCAGTACAGAGAGATGGTCGACGGCGGGGTCGTCACAG
AAGAGGTGAAGCTCTGCTGCTGCTGTTGCTGCTGCTGTTGCTGCTGTTGG
TGCCTTTGCTGCTGTTGCTGCTGTTGGTGGTGTGTTGCTGCTGTTGCTGC
TGCTGTTGCTGCTGCAGATGTTTTGCTACTGCTGTGCATGGTAGAGGCGG
CGTGTGTTCTTTATTCTGTACGTACGTGCAGCACGGGGGGGGGAGTCGTC
GCTGTGGGGCGAAAAGGGAGCGGCGGTGCAACACGAGCTGTCACACAGAG
ATAACAAGATAAGACTGGCCTCTACCCCCGATGATATGTCTTGCATGCGT
CTTCTGCCGCGAAAAGGCTGCAGCACGCACCAACACAAGAGTGTATTGTG
CACCAGCAGGAGGAGTGTTAGTGAATGAGATCGACTGTTTACTCACGCGT
GTTCGGTCAGAGTATGACATGTGCTTCGGTGAAATGTCTGAGGAAGCAGG
CAGTGCTATCTCCAGAGAGAATCAGACGAACGCGCGCCCGCGGTTGGCAC
GTAGCACCGGCCCTGACTTGTTGCTCCTATTGCAGCTTCAGATTGTACTA
CCAGTACGGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCAAATGTG
TGTGCTCTGGGTGCCTTCGTCGTATGTTGGTATGTTTGTTAATTTCTTTG
CTTTGTTTTTTTCACATCTGTTATTTTTTGTTTTTCTGCTTTTTTTTTGC
AGGAGTTCTGGGAGTCCCGGAGGCGTACCTTGGCCGAAGACGACGCGAAG
GCGGCGTCGAAACACACTGGAACGCCGAGCGAGATGCCGAGCGACCTCGT
GGCAGAGAAGACCTCCACGGGAACGCTCAAGTTTAAGCTCAACGCGCGCA
CGATACACAGCATCTTCACCATGTACCCCATCGTCTTCAAGTGAGCCGGC
CGGCTTTGGGCAGCTTTTCAGAGCTCACGTGGCTTGCGCCCCCCCCTTTT
TTTTCTCCCCCCAGGCGTATCGTGCTCAGTTTTAGTCGTTGAAGTCTCTT
TGTCACGGGGGGAGAGATAAAAAAAAAACAATGAGGACGATAGATGAGTA
TTGAAAGAGAATGGTGACGAAGACTGAAACACTGGCGACGAAATCGCGTA
GTGAGAGAGAGACAGAGAGGGAGAGATTCGTTCTACATTTTATTGCCACA
ATTTTTTTTTGTGTGGTCTGTTGAGGCCTGTTGAGAGGAGACACATGAGA
TTGTCACCTTTGGTTTCTGTCTACAGGCTGGGCGTACCAACTGAATCCCA
TTCCCTTAGTCCCCCCCCTGCGAAATATATATATATATATATGTATATAC
AACGTAGAGAGAGAGAGAGAGAAGTGGCAGCCGCAGTAGGAGCAGCAGTG
GCAGCATCCAGCAGAGTTTCCCACACGTGTATAGGTGATCAGTACACGTG
GCAATGCAGAGCAGTACCGCCTCGCTGCTGGTAGTCGGTGGAAATGGTCC
CACGCGCCCCCCATGCGCCCCGCTTACGTCTGCGTCCGGTGTCGGTAATG
CACATGAAAAGCACTGCACAGCATAGAAGAAGATGAACAACACACACCAT
CGCGACAACTGCTGTCTGTCACTCACGCTAGACTAACCCCGTCCCCGCTC
CCGCCGTGGTCCCTGCTCCCTGTCTCTCGCCCTGACTCATTTATAACAAC
AAACAATTAACAACAACAACAACAACAACAACAACAACAACGACGACAAC
GACCGCATCACAAAATGCCACGAAAGAGCCTACCAGGCGAACGTTCCCAC
GGAGATGACCGAGAAAGAGTTCTGGACAAAATACATCCAGAGCGCCTACT
TTAACCGCGACAGGGGGAGCGGCAGCGGCAGCAGCGGCGGCGGCGGCGCG
AACAGCGGGTCCACCTCGTCGGCCATCAGCGGCAACAAGCGGAAGTCCTT
GGAGGCCGGCGGCGGGGAAGGGGGACAGGACGATATGTTCCTGCGTTTCG
CCGCGCAAGAGGCCGAGAGAGAGAAGAAGGAGAAGGAGGAAGGGGGCGGC
GCTGCGGGCGCAAAGCGCGCGAGGGCAGCGGCGGCGGCGGCGGCGGCTGC
AGGCGCGGGTGGCGCGGCGGCGGGGGTTGAGGGAGGGGGCAGGCTGGAGG
CGGGGAGCGTCGACCCCATGGTGGATTTGACGTCGCAGTGGGGGGACCAT
CATGCGCGAGAGGTGTGATGCGCGTGGCTATGTAGCGGATGCGTGCGCGT
GCGCTTGCGCGTGTGCGTATTTTGTGTGTGTGTGCGTGTGTGTGCGTGTG
TGTGTTATTGTTTTCTCATGTATTTGTGCTTGTGTACGGTTTGTGCGCGT
GTGCGTTCTTGACGCACGTGTGTGTGCGACTTTTTCGTTGTCGTGCGTGC
TTGCGTACCTGCGTACCTGCGTGCCTGCGTGCTTGCTTGCTTGCGGTGGT
GCCTGCAGGTGGACGATAGCGACCCGTTGGAGGAGCAAACCGAGGCGGCC
AACAAGCGGAAGGAGGTCATCGGAAAGTTTAACCGACACGCAAGGTGAAC
TTTTCCTGAAACCGTCCGATATCATGCTTTGATCTGGGCGAAAAATTGCG
GCCTGATTCAATCAGCCACACCAACGCAGTTGTGTATGGTTAGTCGAAAA
CTTGCGGACTGATGTAGTCAACCACCACCGCAGTTGTGTTTGGTTGGTTG
CACAGCAGCAGGACGAAGTAGGAGGTTTTGAAACGGTGAAACTTGCCGAC
TGGTTCAATCAAAAACCGCCTTGGGGTTCGGTTGATTGTACAGCAGTCGT
GCGAGTAGGAGAGTTGGTTGGATCCGATTTGATTGGACGAAAAACACGCC
GACTTCATCGACGGGTGTGTCGCTTAGGGTAGCGCACGATGATCGCACGT
GTATGCGCATGATACGTACCTGTCAATCTATTTCGTTGGAGGGCGGACTG
AATCTAAGATTCAAATTTCATCAACCACAGCAGTGTTTTGGCTTGATTTG
ATGCACTGCTGTATCACATAGGCTCAAAATTCTTGTCGTTCCTCTTGTCT
CTTCATCGATCGTCCCCCTGTGCGACCCCCCCCCTCCCACCAACGGAACC
GACGGTATCTCGTCTACATATATGTATACTACAAAGATTGGTGATGCAAC
CTCCCGACGGTGGAGGTACGGGGGCCGGCGGAGGGCGACCGGCGCTGGTG
GACAGCGCGGAGTCGGCGACGGACTTGCCCGAGCTCAGGATTCACCAGGA
AGTCTCCCGGGAGAAGGTTAGGGGGGGGGTATGATACTGCTGTTGCGTCG
CCAAGGAAAATTCAAGGTGGCTCCTTCCCGGTTGTTGATGATTTTGTTCA
CGTTACAGCAGCTCACCACGAAAGCCTTTAGCCCGTCTACGGTGGTCACA
AACCAGACACGTATCGTGCTACGAGAGGGAAATAAAAATATAAAAGAAAA
TACGGCGTGATGCGGTGTGTGCAAGCGGGGTGCTATGCTACGCTTTCATG
GGGTGACATTCAAGAGGATGTCATGTACGGAGTACTACATTCAATGCGGT
ACTGCTGTTCCTGGTAAAATGAAACGGAGAGAAAGACTTACCTGAATTAC
ATTGGTGCAGTGCGCATTGTCGTGTCAATAAAATGCTTTTGTGCAAGAGA
CAGCAGTGTGATGCGTGCCCTTTTTTTTTGACAAGGGACAGCAGTGTGAC
GTGCTGTTTACAAGAGATATTTGCAGGAGGCAGGGAAAGGGGTCTGATTT
GCAGGTGTGATGCGTAGGTAGTCAAGACAGAGCGAGAGAGGGAAGAGAGA
GAGAAAAGGCGTCGCCTATCAATGCCGTGCTTTGACGTTTATCCTTCCCA
GTCGGTTTTGTGCGCACGGCATGATTACGTACCACGCAGAGTCAAAAGGA
GACAGGCCGGACTGGAGTCTTTTTCGTTTTTTTGCTCAGCAGGTTTGACA
ACAGGTACGATTTCTTCTTCGCCCTCCAAAAAGCTAAGTTTAGCGCTTGA
TACTTGAGTGATTTGGGCACAGAGAGCTCCGCGGGTTTTTATCTGAAGCT
CACTCCAAGCAGTACATAAAATACACGAAGTACCCTACTGCTGCTGTACG
TCGTGGGTACTGGTTGCCCAAATTGGCACCCCCCCACTCCCGCAAAAAAA
CGCAGCACAGCAGTACAGTGAAAAATAACTGAACATCAATAGCAAAAGCC
CAGATGTTGATGGTGGCTCTGTAAGGAGCAGGAATGGCGGTGCTCCCGCT
CGAAAGGGGATCTGCGATGAAACGGTCAAAATATCAAAGGACTCACATGA
TTAAACTCAAACAGCAAATGAGTGCGCCCCCCCCCCCCCCCCCACCCTTC
CCCCTCTATCAACGGCGACCCCCCCCCCCCCCCCCCCAGCTTGAAATCGC
GAACAAGAAGCGGTATCACGGAGGAAGCAACAGCAAACTCGGTGGCGGCG
CCTCCAACGGTGCCAGCGCCAGAGCCTCCAGTCAGGCCGGTCCGTCGTCG
TGGCCCCAGTCCCGTCGACTGATTGGGGCGGTTACGCTAGCTGAGGCGAA
GGCGCAGCTCGGGCCCGGGTTTTCCATCCTCGGAGCCGGGAGGCCCTGCG
TGGCCAGGGCGGTGGTGGCGCCGCGTCAGGCGCTGTCTGCCCTGAGGGAG
TGCACAAAGGAAGCCGACAAGGGGATCGGGGACGCGTTTCGTCTCCAAGG
GTGAGTGATTCGGGTGAGGTTTATTTGTTTGGTGGCTTCGAGGTTTGCTT
TGCTTTGTTATTTTTAGACACCTTTTAGTGTGTGTGTTTGTGTGGGTTTA
CGTTCGTTCGTGCGTGCGTGTGTGAAGCCCGGTGGAATATTTTTGTGGAA
AGATAATTTTTGTAGAAAAATAATGTTTTGTAGAAAAGTGAAATGACATC
AAAGGAAGAGCACCCATCCGAGACTAGATTCCGTAGGATGAGTTGACTTC
CTCACAGAGAGGGGTTTCATACATCGGCCGGCAATAAAATCACCGTTAGA
CATGATGCACATCGTAGAGTAACTCCCCTGCACAGCTCTGCCGCCGGGTC
TAACAACATTGATCGTCAAAGATATAACGCAACCACCGTAAGAAACCGTG
CTAACATTTTCTTTTTTCAATTATTTCACTTTTCCCGAGAGCCGAAATCG
TCTCTGGAAAAGTTGCCAAGCAAAAGAACCCCACCCAAATGCTTACCCAT
TTGGAAACATTACCACGTTTTTCCCTCCCCCCCCCGCCCGCTTCCCGCCC
AGAATAATACAGACAATACCTTGGGCTTTGCACGCTAAGATATGCCAAAA
ACATTGGGAGCGCCCAGATGATCGTATTGGCGTGTCGTGGGCAGTGGCCC
CTTGTAGTAGTAAGAACGGATGCGCGGTCAATCATCAAATAAGGCAAGCG
TTAACCGAGCAAACATCCCTCCTCGCTTCTCATCCCCCCCCCCCCCCCCC
CCTGATCCCCCTTTCTCGCACACGCCGCGCCCGAAGATACGAGGACTTCA
TCGGGGGCATGCATCGCCACTTCCAGATCGTCGGCGAGCTTCTCAGGTAA
CTATTTACAGACGTCTGTACTTGTGTTGCGCGAGGCACGTACAAAGCACC
CGCTCTCATATGCCGTTGATCTGTGAGACATACCATCCTGTTGTACACAC
GCCGTTGGGTGGTGGTGGTGGTGGTGAGGTTGGGGTTGCTCGACGACCTA
CGAAGCACATTTTTTTTTCTTTCGCACGGCCATCTAATTTTTGTGCCAAC
CAGTACACAATCACCGCGTGCCAAGAGTAGTTCAGGTTGGTTGTGCATGT
GCAGGCATCGGTTGTTTTGCCTCAGGGGCGCAGCAGTGCCATGGTTGTTT
GCCTCGGCTTTATGGCCGCCGTCATTTGTTCGGCCTGTTATCTCAAACGT
TCGGACAACGAAACTGCTGCCTTTTGCGAATCACATCACACGGTACTGCT
GTATGTATGTAGCTCCCCCTTGTTCCCGCTTTTTTTTTTTATGTTTTTCA
TTCTTTTTTTGCACCAGTTTTTTTTTTCTTTTTTCTCTTTTCTTTTCATA
CCTCAGTCAACCTCGATCCAACCCGGGCTGACGTCATACTTTATTCTCTG
ATCTCCATATGTCTCTAATCTCTGGTGCAGTTGTTCTCCGTGTCCTTGAA
TTCAAGTCTTCTTTCTTGTGTGTGTGTGTGTGTGTGTGTGCGCGTGTGCG
TGTGTGTGTGCGCGTGTGCGTGCGTGCGTGCGTGTGCCATATCCCCTGGA
TATCTACGTGAGCCTCTATCGACCCTTGGCTTAACATCGCTGTCTTGTTT
TCTGCTCTGTCTCTTGCGTCATAGGTTTCTCCGTGTTGTTCGATCGAATG
AATTGAGTCTGCTCCCGTGTGTGTCTTCTTCTTCTGTGGTGTTTGCGTGT
GTATCATATCCAGACATTTTTACGCGAGCCTCGACCGCCCGCGGTCCGAC
CCCGGCGCGGTTGCAAAGCTGGCCCGACTCGAGACGCGCATGGACAGCAA
GTACAAGGAGCTGAACAAGGAGCGGCAAGGGCTCCCCCGGAACGCCGACG
GCAACCGCCTGTCCGCGGTGATCAAACCCCTCCTGGACTGCCTCGACCAT
GCCTTCCAGAAGCTGGAGGAGAGCAAGGCTAGGAGCGGTGGTGGTGGT
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Coding sequence (CDS) from alignment at P-littoralis_Contig125:313899..323296-

>mRNA_P-littoralis_Contig125.79.3 ID=mRNA_P-littoralis_Contig125.79.3|Name=mRNA_P-littoralis_Contig125.79.3|organism=Pylaiella littoralis U1_48|type=CDS|length=2124bp|location=Sequence derived from alignment at P-littoralis_Contig125:313899..323296- (Pylaiella littoralis U1_48)
ATGGCCATGCCGGGACCTTCGCTAGGCGTGGGAGAAGAGGTGCTCATCAC
TGTGTACGCCGTGCACAAGAAATGTCCAGGAACGGTGTGGTTTACGACAC
GGAGGGCACTGTGGAGAGCAGCGGATGGGAAGGCCGCTGTTCAGCGCGTA
GAGGTTCCCTGGGCAGCAGTCATGAGCTTTCAGTGCTCCCCGGCGAGTGA
GGCCCGAGCCATGATGCGCCTCCTGAGAGTTGCCGAGGGCCAACCCCCTA
TCATATTTCGATTCACGGAGACCCCAGGCGACACGCCGAGAGAGGTCCTG
GAGAGGGCGCAGGCGGCAGTGCGGAAGGCGCTCAAAGGGGGTGCGGAAGC
GGGAAACAGCAGTGTCGGGGGGGGGGCGGGGGCGGCGGAGGGTGCAGGGG
TCGGTGGTAGCAGCAAAGGGGCGGCAAAGGGAAAGGGCGGCAAAGATGGA
GCCAAGGGCGGCGCGTTGAAGAAGATGAAGTGGAAGACGAGGGGCGGTCT
CATGGGATCTGCCTCGGGGGGACAGTCTCTTCGCCACAGTCGAGACAGGG
ACAGCATGCCCGGGGGGCGGATGCGCGACGTCCACGACGCTCGTCGGAGA
GCGGCACTGCTGGCGGGGGACGAGGTCCTAACGGCCCAGTACAGAGAGAT
GGTCGACGGCGGGGTCGTCACAGAAGAGGAGTTCTGGGAGTCCCGGAGGC
GTACCTTGGCCGAAGACGACGCGAAGGCGGCGTCGAAACACACTGGAACG
CCGAGCGAGATGCCGAGCGACCTCGTGGCAGAGAAGACCTCCACGGGAAC
GCTCAAGTTTAAGCTCAACGCGCGCACGATACACAGCATCTTCACCATGT
ACCCCATCGTCTTCAAAGCCTACCAGGCGAACGTTCCCACGGAGATGACC
GAGAAAGAGTTCTGGACAAAATACATCCAGAGCGCCTACTTTAACCGCGA
CAGGGGGAGCGGCAGCGGCAGCAGCGGCGGCGGCGGCGCGAACAGCGGGT
CCACCTCGTCGGCCATCAGCGGCAACAAGCGGAAGTCCTTGGAGGCCGGC
GGCGGGGAAGGGGGACAGGACGATATGTTCCTGCGTTTCGCCGCGCAAGA
GGCCGAGAGAGAGAAGAAGGAGAAGGAGGAAGGGGGCGGCGCTGCGGGCG
CAAAGCGCGCGAGGGCAGCGGCGGCGGCGGCGGCGGCTGCAGGCGCGGGT
GGCGCGGCGGCGGGGGTTGAGGGAGGGGGCAGGCTGGAGGCGGGGAGCGT
CGACCCCATGGTGGATTTGACGTCGCAGTGGGGGGACCATCATGCGCGAG
AGGTGGACGATAGCGACCCGTTGGAGGAGCAAACCGAGGCGGCCAACAAG
CGGAAGGAGGTCATCGGAAAGTTTAACCGACACGCAAGATTGGTGATGCA
ACCTCCCGACGGTGGAGGTACGGGGGCCGGCGGAGGGCGACCGGCGCTGG
TGGACAGCGCGGAGTCGGCGACGGACTTGCCCGAGCTCAGGATTCACCAG
GAAGTCTCCCGGGAGAAGCTTGAAATCGCGAACAAGAAGCGGTATCACGG
AGGAAGCAACAGCAAACTCGGTGGCGGCGCCTCCAACGGTGCCAGCGCCA
GAGCCTCCAGTCAGGCCGGTCCGTCGTCGTGGCCCCAGTCCCGTCGACTG
ATTGGGGCGGTTACGCTAGCTGAGGCGAAGGCGCAGCTCGGGCCCGGGTT
TTCCATCCTCGGAGCCGGGAGGCCCTGCGTGGCCAGGGCGGTGGTGGCGC
CGCGTCAGGCGCTGTCTGCCCTGAGGGAGTGCACAAAGGAAGCCGACAAG
GGGATCGGGGACGCGTTTCGTCTCCAAGGATACGAGGACTTCATCGGGGG
CATGCATCGCCACTTCCAGATCGTCGGCGAGCTTCTCAGACATTTTTACG
CGAGCCTCGACCGCCCGCGGTCCGACCCCGGCGCGGTTGCAAAGCTGGCC
CGACTCGAGACGCGCATGGACAGCAAGTACAAGGAGCTGAACAAGGAGCG
GCAAGGGCTCCCCCGGAACGCCGACGGCAACCGCCTGTCCGCGGTGATCA
AACCCCTCCTGGACTGCCTCGACCATGCCTTCCAGAAGCTGGAGGAGAGC
AAGGCTAGGAGCGGTGGTGGTGGT
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