mRNA_P-littoralis_Contig125.64.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig125.64.1
Unique NamemRNA_P-littoralis_Contig125.64.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig125.64.1 vs. uniprot
Match: D8LFT6_ECTSI (Similar to A-kinase anchoring protein 18 gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT6_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 3.670e-96
Identity = 179/316 (56.65%), Postives = 207/316 (65.51%), Query Frame = 1
Query:   10 GGRNEARGRNRPAGGWAGGTPRRPRGGPSNRPPRPNHFLSVRIDNAQIWENISTLQGDILGSHAHLTDAAIPVQDLHLTLFVLTLHEQDGSLQRAKETLEHCGDILLEFGLSPEGESLATPSTAESLSRDE------------DTAVVVVNREASHLTLSFRGLGDFGNKVLFARLVENEQSARFRSLVSALHRRFSEARLLAGAAPRSPSPFPGRSSGANNADENGTSNSNDSSSRSGGGRQFEFKPHLTVMKTSKLRDRSTLIPPSSYERHCESLVIGDHAPVALELSSMLEREDVPSLTGWESRLYYKCEQKL 921
            GG    RGRNR    WAG + R PRG  S RPPRP HFLSVRIDN QIW  IST+QGDIL  + HLTDAAIPVQ  HLTLFVLTL E+DGSLQ+A++TLEHCGD+LLE GLSPE +  A+ S AES+  D             +TA  V    AS L LSFR LG F NK+LFA+LVE+EQ+ R R L S+LHRRFSEA L+  AA      FP R       ++ G                FEF PHLT+MKTSKLRDR TLIP  SY+R+    V+G HAP ++ELSSMLE+EDVP L GWE R YYKCE +L
Sbjct:   14 GGGGAPRGRNR----WAGASAR-PRGNAS-RPPRPTHFLSVRIDNPQIWAKISTIQGDILAGNQHLTDAAIPVQASHLTLFVLTLSEKDGSLQQARDTLEHCGDLLLEHGLSPEVDLQASASRAESVPDDHMHPAALAIGDSNETAPGVA--AASPLMLSFRDLGHFRNKILFAKLVEDEQATRLRGLASSLHRRFSEAGLVEEAAG-----FPSRKG-----EKRGDXXXXXXXXXXXXXDSFEFTPHLTIMKTSKLRDRGTLIPADSYDRYQNGFVVGHHAPSSVELSSMLEKEDVPPLEGWEPRPYYKCEHRL 311          
BLAST of mRNA_P-littoralis_Contig125.64.1 vs. uniprot
Match: A0A6H5K2C7_9PHAE (AKAP7_NLS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2C7_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 8.440e-74
Identity = 135/247 (54.66%), Postives = 164/247 (66.40%), Query Frame = 1
Query:  211 DAAIPVQDLHLTLFVLTLHEQDGSLQRAKETLEHCGDILLEFGLSPEGESLATPSTAESLSRD----------EDTAVVVVNREASHLTLSFRGLGDFGNKVLFARLVENEQSARFRSLVSALHRRFSEARLLAGAAPRSPSPFPGRSSGANNADENGTSNSNDSSSRSGGGRQFEFKPHLTVMKTSKLRDRSTLIPPSSYERHCESLVIGDHAPVALELSSMLEREDVPSLTGWESRLYYKCEQKL 921
            DAAIPVQ  HLTLFVL L E+DGSLQ+A++TLEHCGD+LLE GLSPE +  A+ S+ ES+  D          +          AS LTLSFR LG F NKVLFA+LVE+EQ+ R R L S+LH+RFSEA L+ GAA      FP R  G      +G+  S+DS         FEF PHLT+MKTSKLRDR TLIP  SY+R+    ++G HAP ++ELSSMLE+EDVP L GWE + YYKCE +L
Sbjct:   35 DAAIPVQASHLTLFVLRLSEEDGSLQQARDTLEHCGDLLLEHGLSPEVDLPASASSTESVPDDGMHPAALGIGDSNETAPGATAASPLTLSFRDLGHFRNKVLFAKLVEDEQATRLRGLASSLHQRFSEAGLVEGAAG-----FPSRKGGKRGDGGDGSGTSSDS---------FEFTPHLTIMKTSKLRDRGTLIPADSYDRYQSGFLVGHHAPSSVELSSMLEKEDVPPLEGWEPKPYYKCEHRL 267          
BLAST of mRNA_P-littoralis_Contig125.64.1 vs. uniprot
Match: A0A293M337_ORNER (A-kinase anchor protein 7 (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M337_ORNER)

HSP 1 Score: 70.5 bits (171), Expect = 3.800e-10
Identity = 43/156 (27.56%), Postives = 73/156 (46.79%), Query Frame = 1
Query:  109 RPNHFLSVRIDNAQIWENISTLQGDILGSHAHLTDAAIPVQDLHLTLFVLTLHEQDGSLQRAKETLEHCGDILLEFGLSPEGESLATPSTAESLSRDEDTAVVVVNREASHLTLSFRGLGDFGNKVLFARLVENEQSARFRSLVSALHRRFSEARL 576
            RPN+F++++   A+I +NI  +   I      ++ A + +  LHLT+ VL +++ DGSL+RAKE L    D+L +                              +  ++ L L F+GLG F N+VLFA++   E   R + +     + F  + L
Sbjct:   20 RPNYFVAIQTRTAEIHKNIEKVVDHIRSCEPAISKACVAIPTLHLTVLVLRVNDDDGSLERAKEALVRSYDLLKD------------------------------DLNSNPLVLQFKGLGHFRNEVLFAKVEGQEAKERLKKIADVCLQEFKNSSL 145          
BLAST of mRNA_P-littoralis_Contig125.64.1 vs. uniprot
Match: UPI000F686529 (uncharacterized protein LOC113802659 n=1 Tax=Penaeus vannamei TaxID=6689 RepID=UPI000F686529)

HSP 1 Score: 68.9 bits (167), Expect = 9.680e-10
Identity = 62/258 (24.03%), Postives = 107/258 (41.47%), Query Frame = 1
Query:  106 PRPNHFLSVRIDNAQIWENISTLQGDILGSHAHLTDAAIPVQDLHLTLFVLTLHEQDGSLQRAKETLEHCGDILLEFGLSPEGESLATPSTAESLSRDEDTAVVVVNREASHLTLSFRGLGDFGNKVLFARLVENEQSARFRSLVSALHRRFSEARLLAGAAPRSPSPFPGRSSGANNADENGTSNSNDSSSRSGGGRQFEFKPHLTVMKTSKLRDRSTLIP----PSSYERHCESLVIGDHAPVALELSSMLEREDV 867
            PRPN+F+ +R+ + +I   I  +Q  I+ S ++L  A I V   H+T+ V+ + + D +L  A   L+ C D L E                              + E S + ++F G+G F ++V++ARL E+E   R   L   + + FS A +        P   P                                +PHLT+ K SK+R ++   P    P++Y+   +++  G  +   L+L SM   +D+
Sbjct:   67 PRPNYFVGIRVSDCEIHRTIVRIQEAIIASDSNLYQALIDVASSHITVLVMYI-DSDIALSVASSALDTCWDKLKE------------------------------DIEESPIQMTFSGIGSFSDRVVYARLREDEHYFRLLKLAKEVRQIFSNASVCL------PDEKP-------------------------------MQPHLTIAKMSKVRQKAGSFPRNINPAAYQP-LKNIYFGCQSVSGLQLLSMTRPKDL 255          
BLAST of mRNA_P-littoralis_Contig125.64.1 vs. uniprot
Match: UPI0015FEDAB6 (uncharacterized protein LOC118409519 isoform X1 n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0015FEDAB6)

HSP 1 Score: 69.7 bits (169), Expect = 1.590e-9
Identity = 47/154 (30.52%), Postives = 73/154 (47.40%), Query Frame = 1
Query:  106 PRPNHFLSVRIDNAQIWENISTLQGDILGSHAHLTDAAIPVQDLHLTLFVLTLHEQDGSLQRAKETLEHCGDILLEFGLSPEGESLATPSTAESLSRDEDTAVVVVNREASHLTLSFRGLGDFGNKVLFARLVENEQSARFRSLVSALHRRFSE 567
            PRPN+F+++R+ N +I   +  +Q  +L    +L  A IP+ ++H+TL V  L E+   + RAKE L      L +  L+P+                         R  S L L+F+GLG F N V+FA++ EN+     R L   +   F E
Sbjct:  487 PRPNYFVAIRVSNEEIHRGLEAVQQAVLEQEKNLLPAMIPLINMHITLLVTHLREEQ--VDRAKEALR-----LAKARLNPK-----------------------FLRPESRLVLTFQGLGTFRNDVVFAKIQENDHLTSLRELAETVQTCFVE 610          
BLAST of mRNA_P-littoralis_Contig125.64.1 vs. uniprot
Match: A0A8C3I1G0_CHRPI (A-kinase anchoring protein 7 n=2 Tax=Chrysemys picta bellii TaxID=8478 RepID=A0A8C3I1G0_CHRPI)

HSP 1 Score: 68.9 bits (167), Expect = 1.590e-9
Identity = 73/275 (26.55%), Postives = 111/275 (40.36%), Query Frame = 1
Query:  109 RPNHFLSVRIDNAQIWENISTLQGDILGSHAHLTDAAIPVQDLHLTLFVLTL--HEQDGSLQRAKETLEHCGDILLEFGLSPEGESLATPSTAESLSRDEDTAVVVVNREASHLTLSFRGLGDFGNKVLFARLVENEQSARFRSLVSALHRRFSEARLLAGAAPRSPSPFPGRSSGANNADENGTSNSNDSSSRSGGGRQFEFKPHLTVMKTSK---LRDRSTLIPPSSYERHCESLVIGDHAPVALELSSMLEREDVPSLTGWESRLYYKCEQK 918
            +PN+F+S+ I N +I   I  +Q  ++     L+ A I    LH+TL V+ L   E+ G+  RA          LLE                   S+D    ++    +  HL LSF+G+ DF N+V+F +   +  +A    +   + + F E  +LAG                    EN                   FKPHLT MK SK   LR +   I P  YE   +S   GD     L+L SML+++        ES +  + E++
Sbjct:   80 QPNYFISLPITNPEITRGIQAVQDIVVQKDHRLSQAMIRYGSLHVTLLVMHLSNEEEVGTAVRA----------LLE-------------------SKDAVEELL----QGKHLDLSFQGIDDFRNQVVFVKFAASHHTAALTEISETMKKIFQEKGILAG--------------------ENRA-----------------FKPHLTFMKLSKSPELRKQVKKIDPHLYENF-KSHYFGDETLYRLDLCSMLKKKQPNGYYHCESSITVEDEEE 283          
BLAST of mRNA_P-littoralis_Contig125.64.1 vs. uniprot
Match: UPI0011CFB34A (A-kinase anchoring protein 7 isoform X5 n=3 Tax=Gopherus evgoodei TaxID=1825980 RepID=UPI0011CFB34A)

HSP 1 Score: 68.6 bits (166), Expect = 2.480e-9
Identity = 65/260 (25.00%), Postives = 104/260 (40.00%), Query Frame = 1
Query:  109 RPNHFLSVRIDNAQIWENISTLQGDILGSHAHLTDAAIPVQDLHLTLFVLTLHEQD------GSLQRAKETLEHCGDILLEFGLSPEGESLATPSTAESLSRDEDTAVVVVNREASHLTLSFRGLGDFGNKVLFARLVENEQSARFRSLVSALHRRFSEARLLAGAAPRSPSPFPGRSSGANNADENGTSNSNDSSSRSGGGRQFEFKPHLTVMKTSK---LRDRSTLIPPSSYERHCESLVIGDHAPVALELSSMLERE 861
            +PN+F+S+ I N +I   I  +Q  ++     L+ A +    LH+TL V+ L  ++      G+L  +K+ +E   ++L                                  +  HL LSF+G+ DF N+V+F +   ++ +A    +   + + F E  +LAG                    EN                   FKPHLT MK SK   LR +   I P  YE   +S   GD     L+L SML+++
Sbjct:  173 QPNYFISLPITNPKITRGIQAVQDIVVQKDHRLSQAMVRCGSLHVTLLVMHLSSEEEVGTAVGALLESKDAVE---ELL----------------------------------QGKHLDLSFQGIDDFRNEVIFVKFAASDHTAALTEISETMKKIFQEKGILAG--------------------ENRA-----------------FKPHLTFMKLSKSPRLRKQVRKIDPHLYENF-KSHYFGDETLYRLDLCSMLKKK 357          
BLAST of mRNA_P-littoralis_Contig125.64.1 vs. uniprot
Match: UPI00112D6EA2 (A-kinase anchoring protein 7 isoform X3 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112D6EA2)

HSP 1 Score: 68.6 bits (166), Expect = 2.690e-9
Identity = 71/256 (27.73%), Postives = 107/256 (41.80%), Query Frame = 1
Query:  109 RPNHFLSVRIDNAQIWENISTLQGDILGSHAHLTDAAIPVQDLHLTLFVLTLHEQDGSLQRAKETLEHCGDILLEFGLSPEGESLATPSTAESLSRDEDTAVVVVNREASHLTLSFRGLGDFGNKVLFARLVENEQSARFRSLVS-ALHRRFSEARLLAGAAPRSPSPFPGRSSGANNADENGTSNSNDSSSRSGGGRQFEFKPHLTVMKTS---KLRDRSTL-IPPSSYERHCESLVIGDHAPVALELSSMLERE 861
            +PN+F+SV I N +I +NI TLQ  ++     L+ A +P    HLTLFV+ L  ++                           +LA  +  E+ S  E+            + LSF+G+ DF N V+F RL E + +A   ++++  + + F E  +L G               ANNA                      F PHLT MK S   KL  +    I PS YE   ++   GD     L+L SML+++
Sbjct:  198 KPNYFISVPITNQKILDNIQTLQDTVVQKEHRLSKAMVPQGTFHLTLFVMHLSSEEEI-------------------------ALAVCALTETKSLVEELL------HGRPMVLSFQGISDFRNAVVFVRLAEGDPAAATLTMITKTMMKLFKEKGILIG---------------ANNA----------------------FTPHLTFMKLSRSPKLHKQGLKKIDPSLYEDF-KNHYFGDEILNNLDLCSMLKKK 384          
BLAST of mRNA_P-littoralis_Contig125.64.1 vs. uniprot
Match: UPI001126EF6B (A-kinase anchoring protein 7 isoform X2 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI001126EF6B)

HSP 1 Score: 68.6 bits (166), Expect = 2.790e-9
Identity = 71/256 (27.73%), Postives = 107/256 (41.80%), Query Frame = 1
Query:  109 RPNHFLSVRIDNAQIWENISTLQGDILGSHAHLTDAAIPVQDLHLTLFVLTLHEQDGSLQRAKETLEHCGDILLEFGLSPEGESLATPSTAESLSRDEDTAVVVVNREASHLTLSFRGLGDFGNKVLFARLVENEQSARFRSLVS-ALHRRFSEARLLAGAAPRSPSPFPGRSSGANNADENGTSNSNDSSSRSGGGRQFEFKPHLTVMKTS---KLRDRSTL-IPPSSYERHCESLVIGDHAPVALELSSMLERE 861
            +PN+F+SV I N +I +NI TLQ  ++     L+ A +P    HLTLFV+ L  ++                           +LA  +  E+ S  E+            + LSF+G+ DF N V+F RL E + +A   ++++  + + F E  +L G               ANNA                      F PHLT MK S   KL  +    I PS YE   ++   GD     L+L SML+++
Sbjct:  198 KPNYFISVPITNQKILDNIQTLQDTVVQKEHRLSKAMVPQGTFHLTLFVMHLSSEEEI-------------------------ALAVCALTETKSLVEELL------HGRPMVLSFQGISDFRNAVVFVRLAEGDPAAATLTMITKTMMKLFKEKGILIG---------------ANNA----------------------FTPHLTFMKLSRSPKLHKQGLKKIDPSLYEDF-KNHYFGDEILNNLDLCSMLKKK 384          
BLAST of mRNA_P-littoralis_Contig125.64.1 vs. uniprot
Match: UPI001126079F (A-kinase anchoring protein 7 isoform X1 n=3 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI001126079F)

HSP 1 Score: 68.6 bits (166), Expect = 2.800e-9
Identity = 71/256 (27.73%), Postives = 107/256 (41.80%), Query Frame = 1
Query:  109 RPNHFLSVRIDNAQIWENISTLQGDILGSHAHLTDAAIPVQDLHLTLFVLTLHEQDGSLQRAKETLEHCGDILLEFGLSPEGESLATPSTAESLSRDEDTAVVVVNREASHLTLSFRGLGDFGNKVLFARLVENEQSARFRSLVS-ALHRRFSEARLLAGAAPRSPSPFPGRSSGANNADENGTSNSNDSSSRSGGGRQFEFKPHLTVMKTS---KLRDRSTL-IPPSSYERHCESLVIGDHAPVALELSSMLERE 861
            +PN+F+SV I N +I +NI TLQ  ++     L+ A +P    HLTLFV+ L  ++                           +LA  +  E+ S  E+            + LSF+G+ DF N V+F RL E + +A   ++++  + + F E  +L G               ANNA                      F PHLT MK S   KL  +    I PS YE   ++   GD     L+L SML+++
Sbjct:  198 KPNYFISVPITNQKILDNIQTLQDTVVQKEHRLSKAMVPQGTFHLTLFVMHLSSEEEI-------------------------ALAVCALTETKSLVEELL------HGRPMVLSFQGISDFRNAVVFVRLAEGDPAAATLTMITKTMMKLFKEKGILIG---------------ANNA----------------------FTPHLTFMKLSRSPKLHKQGLKKIDPSLYEDF-KNHYFGDEILNNLDLCSMLKKK 384          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.64.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFT6_ECTSI3.670e-9656.65Similar to A-kinase anchoring protein 18 gamma n=1... [more]
A0A6H5K2C7_9PHAE8.440e-7454.66AKAP7_NLS domain-containing protein n=1 Tax=Ectoca... [more]
A0A293M337_ORNER3.800e-1027.56A-kinase anchor protein 7 (Fragment) n=1 Tax=Ornit... [more]
UPI000F6865299.680e-1024.03uncharacterized protein LOC113802659 n=1 Tax=Penae... [more]
UPI0015FEDAB61.590e-930.52uncharacterized protein LOC118409519 isoform X1 n=... [more]
A0A8C3I1G0_CHRPI1.590e-926.55A-kinase anchoring protein 7 n=2 Tax=Chrysemys pic... [more]
UPI0011CFB34A2.480e-925.00A-kinase anchoring protein 7 isoform X5 n=3 Tax=Go... [more]
UPI00112D6EA22.690e-927.73A-kinase anchoring protein 7 isoform X3 n=1 Tax=Rh... [more]
UPI001126EF6B2.790e-927.73A-kinase anchoring protein 7 isoform X2 n=1 Tax=Rh... [more]
UPI001126079F2.800e-927.73A-kinase anchoring protein 7 isoform X1 n=3 Tax=Rh... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig125contigP-littoralis_Contig125:262775..264627 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LFT6
Preferred nameAKAP7
PFAMsAKAP7_NLS,AKAP7_RIRII_bdg
Model size921
Max annot lvl2759|Eukaryota
KEGG koko:K16524,ko:K18666
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001508,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005886,GO:0006810,GO:0006811,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0008022,GO:0008104,GO:0008144,GO:0008150,GO:0009719,GO:0009966,GO:0009987,GO:0010033,GO:0010243,GO:0010646,GO:0010738,GO:0010959,GO:0012505,GO:0014070,GO:0014074,GO:0016020,GO:0016208,GO:0016324,GO:0016328,GO:0016528,GO:0016529,GO:0017076,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0022898,GO:0023051,GO:0023052,GO:0030133,GO:0030315,GO:0030554,GO:0031410,GO:0031982,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032947,GO:0032991,GO:0033036,GO:0034237,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035556,GO:0036094,GO:0042221,GO:0042383,GO:0042391,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0044093,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045177,GO:0046683,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051018,GO:0051049,GO:0051050,GO:0051179,GO:0051234,GO:0051591,GO:0051716,GO:0060306,GO:0065007,GO:0065008,GO:0065009,GO:0070382,GO:0070887,GO:0071310,GO:0071320,GO:0071407,GO:0071417,GO:0071495,GO:0071944,GO:0097159,GO:0097367,GO:0097708,GO:0098590,GO:0099053,GO:0099503,GO:1901016,GO:1901018,GO:1901265,GO:1901363,GO:1901379,GO:1901381,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902259,GO:1902261,GO:1902531,GO:1903818,GO:1904062,GO:1904064,GO:2001257,GO:2001259
Exons4
Evalue6.01e-97
EggNOG OGsKOG2814@1|root,KOG2814@2759|Eukaryota
Descriptionpositive regulation of delayed rectifier potassium channel activity
Cds size921
COG categoryL
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789547.8509386-CDS-P-littoralis_Contig125:262774..2633251680789547.8509386-CDS-P-littoralis_Contig125:262774..263325Pylaiella littoralis U1_48CDSP-littoralis_Contig125 262775..263325 -
1680789547.8632202-CDS-P-littoralis_Contig125:263342..2634241680789547.8632202-CDS-P-littoralis_Contig125:263342..263424Pylaiella littoralis U1_48CDSP-littoralis_Contig125 263343..263424 -
1680789547.8763595-CDS-P-littoralis_Contig125:263751..2638771680789547.8763595-CDS-P-littoralis_Contig125:263751..263877Pylaiella littoralis U1_48CDSP-littoralis_Contig125 263752..263877 -
1680789547.8856716-CDS-P-littoralis_Contig125:264465..2646271680789547.8856716-CDS-P-littoralis_Contig125:264465..264627Pylaiella littoralis U1_48CDSP-littoralis_Contig125 264466..264627 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig125.64.1prot_P-littoralis_Contig125.64.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig125 262775..264627 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig125.64.1

>prot_P-littoralis_Contig125.64.1 ID=prot_P-littoralis_Contig125.64.1|Name=mRNA_P-littoralis_Contig125.64.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=307bp
MATGGRNEARGRNRPAGGWAGGTPRRPRGGPSNRPPRPNHFLSVRIDNAQ
IWENISTLQGDILGSHAHLTDAAIPVQDLHLTLFVLTLHEQDGSLQRAKE
TLEHCGDILLEFGLSPEGESLATPSTAESLSRDEDTAVVVVNREASHLTL
SFRGLGDFGNKVLFARLVENEQSARFRSLVSALHRRFSEARLLAGAAPRS
PSPFPGRSSGANNADENGTSNSNDSSSRSGGGRQFEFKPHLTVMKTSKLR
DRSTLIPPSSYERHCESLVIGDHAPVALELSSMLEREDVPSLTGWESRLY
YKCEQKL
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mRNA from alignment at P-littoralis_Contig125:262775..264627-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig125.64.1 ID=mRNA_P-littoralis_Contig125.64.1|Name=mRNA_P-littoralis_Contig125.64.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1853bp|location=Sequence derived from alignment at P-littoralis_Contig125:262775..264627- (Pylaiella littoralis U1_48)
ATGGCAACGGGAGGAAGAAACGAAGCTCGAGGACGTAACCGACCAGCGGG AGGATGGGCGGGGGGCACTCCTAGAAGGCCGCGCGGAGGGCCTTCCAATC GACCGCCTCGGCCTAACCACTTCCTTTCCGTGCGGATAGATAACGCGCAG ATATGGGAAAACGTGAGTATCACAACATTTCTCTTGTCCCTTCCCCTTCT GTGGAGAGTCGGTGCAAGGGTGGCCGTGGATCGCATGATTTACAGACGGG CGTCGGTGTGTTTCACACTTCCTATATACTTCGTACGTCTGTACACGATG ACTGGTGCCAGGTATTGATTTCGCTGCACTGAGCCGCCGCCAACAACGCA GCGAATGAATGCCCACACTTTTCGTTCACATGGTGCCACCACAAACCTAT AAAGTGGGTCTGTAGCCCACAGCGAAATGAGAACCCGAGCCTCACCGAGA AGTTCTCCAGGAATGGCGCTTTCTTTAACGGCAGGATCGCAAGTAACGGG ACGTGCATTTGCTGTCGATTCTCGACAAAATACTGCTGCGTGTGACCGAC AACACGACACGTTTTTACCATTTTTCTGAGAAGTCTCCGGAGATCGCATC GAAGGGAACCTTCAGGAACTGACCCTCTTCCCGATTCGGGCATGTAAAAT GATCGCACTGGTGTGTGTCTCAAGTGAACATATACCCACGGTGTGCAGCC ATATTACTGCAACCGTTTCCTCCCTCGTGCCACGGCTGTGTGCCTGTTAG ATATCGACCCTCCAGGGCGATATCTTGGGCAGTCATGCGCACCTGACGGA CGCGGCAATCCCGGTGCAAGATTTGCATCTCACTCTCTTCGTCCTGACGC TGCACGAGCAAGATGGCAGCTTGCAGGTGTGAAATGAAGGGCCTAAGTCA ATGCCGGTGTATCCTTACCGTCAATAACCTATCAGACATTCACAGAGTGA TCCACCACGGATATGTACGTGTGCAACAACATTGATGCACATAATCAGCT GTACGATATTTCCGTGATGCCGATACGAAAAAATTTCACGAGTTCGGCAG AAATCTCCGGCGCACTTATCATACTCCGTATGTATTATAGGAGAAAGGTT GTTCGCGCCTTGACCTGGACACGTGGTACCTGCTGTACTGCTGTTTTAGT TGTGTCCTCGGGACAACAATGCACGTACTTTCGCACGTCCTTCCTATCCG CAGCGAGCCAAGGAGACCCTCGAGCACTGCGGCGACATCTTGCTGGAGTT CGGTCTGTCCCCTGAAGGAGAGAGCCTCGCCACTCGTCGCGGCGGGCGCC AGCTAGCACCGCGGAGAGCTTATCGCGCGATGAAGACACCGCCGTCGTCG TCGTAAATAGAGAGGCCTCGCATTTGACCCTGTCGTTTCGCGGACTAGGA GACTTCGGCAACAAGGTGTTGTTCGCGAGGCTGGTGGAGAACGAGCAGTC GGCGAGGTTTCGGAGTTTGGTCTCCGCGCTCCACCGACGGTTTTCCGAGG CCCGCCTTTTGGCGGGGGCCGCACCGCGATCACCATCGCCTTTTCCAGGA AGGAGCAGCGGCGCCAACAATGCAGACGAAAACGGGACCAGCAACAGCAA TGACAGTAGTAGCAGAAGTGGTGGTGGACGCCAGTTCGAGTTCAAGCCCC ACCTTACCGTGATGAAAACTTCTAAGCTCAGGGACAGAAGCACGTTGATA CCGCCCTCCTCCTACGAGCGGCATTGCGAAAGTTTGGTCATTGGGGACCA TGCGCCGGTTGCCTTGGAACTTTCGAGCATGCTGGAGCGCGAGGACGTGC CGTCTCTGACTGGTTGGGAAAGCAGACTGTACTACAAGTGCGAGCAAAAG CTT
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Coding sequence (CDS) from alignment at P-littoralis_Contig125:262775..264627-

>mRNA_P-littoralis_Contig125.64.1 ID=mRNA_P-littoralis_Contig125.64.1|Name=mRNA_P-littoralis_Contig125.64.1|organism=Pylaiella littoralis U1_48|type=CDS|length=921bp|location=Sequence derived from alignment at P-littoralis_Contig125:262775..264627- (Pylaiella littoralis U1_48)
ATGGCAACGGGAGGAAGAAACGAAGCTCGAGGACGTAACCGACCAGCGGG
AGGATGGGCGGGGGGCACTCCTAGAAGGCCGCGCGGAGGGCCTTCCAATC
GACCGCCTCGGCCTAACCACTTCCTTTCCGTGCGGATAGATAACGCGCAG
ATATGGGAAAACATATCGACCCTCCAGGGCGATATCTTGGGCAGTCATGC
GCACCTGACGGACGCGGCAATCCCGGTGCAAGATTTGCATCTCACTCTCT
TCGTCCTGACGCTGCACGAGCAAGATGGCAGCTTGCAGCGAGCCAAGGAG
ACCCTCGAGCACTGCGGCGACATCTTGCTGGAGTTCGGTCTGTCCCCTGA
AGGAGAGAGCCTCGCCACTCCTAGCACCGCGGAGAGCTTATCGCGCGATG
AAGACACCGCCGTCGTCGTCGTAAATAGAGAGGCCTCGCATTTGACCCTG
TCGTTTCGCGGACTAGGAGACTTCGGCAACAAGGTGTTGTTCGCGAGGCT
GGTGGAGAACGAGCAGTCGGCGAGGTTTCGGAGTTTGGTCTCCGCGCTCC
ACCGACGGTTTTCCGAGGCCCGCCTTTTGGCGGGGGCCGCACCGCGATCA
CCATCGCCTTTTCCAGGAAGGAGCAGCGGCGCCAACAATGCAGACGAAAA
CGGGACCAGCAACAGCAATGACAGTAGTAGCAGAAGTGGTGGTGGACGCC
AGTTCGAGTTCAAGCCCCACCTTACCGTGATGAAAACTTCTAAGCTCAGG
GACAGAAGCACGTTGATACCGCCCTCCTCCTACGAGCGGCATTGCGAAAG
TTTGGTCATTGGGGACCATGCGCCGGTTGCCTTGGAACTTTCGAGCATGC
TGGAGCGCGAGGACGTGCCGTCTCTGACTGGTTGGGAAAGCAGACTGTAC
TACAAGTGCGAGCAAAAGCTT
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