mRNA_P-littoralis_Contig125.62.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig125.62.1
Unique NamemRNA_P-littoralis_Contig125.62.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig125.62.1 vs. uniprot
Match: D8LFT7_ECTSI (Plastid phosphoglycerate mutase protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT7_ECTSI)

HSP 1 Score: 504 bits (1298), Expect = 5.800e-171
Identity = 266/337 (78.93%), Postives = 284/337 (84.27%), Query Frame = 1 
Query:  112 MRRPGSHLRSDP-PGGLVLALAAARKSFARAFCFGGSTTRGHVAVGSGGIGKRLFGGMYNAEKSGNGSGSARPAGSPISAATPPESPFPP-GDDEDLVSFFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKALASAVDLDLGPAVVVSPMGRAQQTLECVREELRKGEASKDFETVEIVPDIREIELFEWQGELKEDIIKKNPEEYAAWVADPSNFNFSGRYPARDLWARAGDAWEQIRSLQSIQDQRRTLVVAHNAINQALLWTALGCDTSYFRKLSWPNCAVLELQWRRGESRAERYRWVVPEASEFVEAGDAVRLLKDGEDDNRYTL 1116
            MRRPG   R  P PGG ++ALA ARKSF RAFCFGG +        S  +GKRLF        +  G+G   P G  ++ ATPPESPFPP GDD +L SFFLLRHGQTNFNAIGRIQGTLDSSILTE+GISQALEAGK LAS  DLDLGP VVVSPMGRAQQTLECVR+ELRK E SKDFETVEIVPDIREIELFEWQG+LKEDIIK NPE+YA+WVADPSNFNFSGRYPARDLW RA +AW+QIRSLQSIQDQ RTLVVAHNAINQALLWTALGCDT+YFRKLSWPNCAVLELQWRRGE+RAERYRWVVPEAS FVEA DA RLLKDGEDDNRYTL
Sbjct:    1 MRRPG---RPRPAPGGFLIALATARKSFTRAFCFGGGS--------SSSVGKRLFRSTAAESSAKAGTG---PRG--LATATPPESPFPPAGDDGELESFFLLRHGQTNFNAIGRIQGTLDSSILTEEGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSEISKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLWKRASNAWDQIRSLQSIQDQPRTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQWRRGEARAERYRWVVPEASGFVEAADAARLLKDGEDDNRYTL 321
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BLAST of mRNA_P-littoralis_Contig125.62.1 vs. uniprot
Match: Q00GN2_KARBR (Plastid phosphoglycerate mutase protein (Fragment) n=1 Tax=Karenia brevis TaxID=156230 RepID=Q00GN2_KARBR)

HSP 1 Score: 172 bits (435), Expect = 5.330e-44
Identity = 103/243 (42.39%), Postives = 142/243 (58.44%), Query Frame = 1 
Query:  403 FFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKALASAVDLDLGPAVVVSPMGRAQQTLECVREELRKGEASKDFETVEIVPDIREIELFEWQGELKEDIIKKNPEEYAAWVADPSNFNFSGRYPARDLWARAGDAWEQIRSLQSIQDQRR-----TLVVAHNAINQALLWTALGCDTSYFRKLSWPNCAVLELQWRRGESRAERYRWVVP--EASEFVEAGDAVRLLKDGEDDNRY 1110
            + +LRHG+TNFNA G +QG+ D S LTE+G +QA +AG  LA+  DL +   V VSP+ RA  TLE V + L              +P++REI+L+ W+G+ KED+ ++ P+ Y AW +   +F   G YP  +LW RA +AW  IR+ +   D +R     TL+V HN I QAL ++A+G D SYFR+LS+PN   LE  W  GE  A R+RW +P  EAS    +  A  L      D RY
Sbjct:   99 YLILRHGETNFNAKGILQGSSDISRLTEKGQAQANKAGMELATLSDLPIEQ-VFVSPLTRATSTLELVAQSL-----PCSLPEAITLPELREIDLYSWEGKQKEDLKREMPDTYQAWKSADPDFVVDGHYPLVELWQRAKEAWAAIRASE---DGKRDIDGVTLIVCHNGIGQALFFSAIGLDASYFRQLSFPNAGALECDWPLGELHASRWRWRLPLDEASSEWRSATAASL---DASDGRY 329
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BLAST of mRNA_P-littoralis_Contig125.62.1 vs. uniprot
Match: A0A7S0F1H7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F1H7_9CRYP)

HSP 1 Score: 171 bits (433), Expect = 3.820e-43
Identity = 94/219 (42.92%), Postives = 140/219 (63.93%), Query Frame = 1 
Query:  403 FFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKALASAVDLDLGPAVVVSPMGRAQQTLECVREELRKGEASKDFETVEIVPDIREIELFEWQGELKEDIIKKNPEEYAAWVAD-PSNFNF-SGRYPARDLWARAGDAWEQIRSLQSIQDQRRTLVVAHNAINQALLWTALGCDTSYFRKLSWPNCAVLELQWRRGESRAERYRWVVPEASEF 1053
            F +LRHG+TN+NA GRIQG+ D S LTE+G +QA   G  L S + +D   +V VSP+ RA++TLE     L +  +        ++ D+RE++L+EW+G LK++I +  P+ Y+ W  + P  F   SG+YP RDLW RA + W+ +R  +   + + TL+VAHN INQALL T LG    +FRKL +PNC + E+    G+S+A+++RW+ P  SE+
Sbjct:  158 FLILRHGKTNYNAEGRIQGSTDFSRLTEEGEAQASSVGGIL-SEIHID---SVFVSPLTRARRTLELAEAGLGRNLSGSAI----VLDDLREVDLYEWEGMLKKEIKEMYPDIYSLWRGENPRQFKLDSGKYPIRDLWKRASNVWDVLR--RDATNGKTTLIVAHNGINQALLCTTLGLSEEFFRKLEFPNCGIAEVIIPHGQSKAKQWRWLYPTPSEW 366
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BLAST of mRNA_P-littoralis_Contig125.62.1 vs. uniprot
Match: A0A7S4C0X0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0X0_CHRCT)

HSP 1 Score: 162 bits (409), Expect = 5.270e-41
Identity = 102/254 (40.16%), Postives = 138/254 (54.33%), Query Frame = 1 
Query:  343 SAATPPESPFPPGDDEDLVSFFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKALASAVDLDLGPAVVVSPMGRAQQTLECVREELRKGEASKDFETVEIV-PDIREIELFEWQGELKEDIIKKNPEEYAAWVADPSNFNFSGRYPARDLWARAGDAWEQIRSLQSIQDQRRT-LVVAHNAINQALLWTALGCDTSYFRKLSWPNCAVLELQWRRG--------------ESRAERYRWVVPEASEFV 1056
            SAA  P +   PG       F +LRHG+TN NA G IQG+ D S+LT++G  QA  AG+ LA          V VSP+ RA+ TLE  R+       +    T EIV  D+RE++L++W+G  K D+ ++ P+EY AW   P  F+ SG+ P  DLWARA + W +I S         T LVV H+ I QALL TALG D   FR+ + PNC  +EL+W  G              +  A R+RW++P  SE+ 
Sbjct:   18 SAALQPPTSAAPGAG---CKFVILRHGETNHNADGIIQGSSDVSVLTDKGKEQARRAGEQLAELYQEGSISKVFVSPLSRARDTLELCRK-------TAPLPTGEIVLADLREVDLWDWEGRNKADLRRERPDEYEAWKGQPLLFSVSGKKPIVDLWARARNVWREIHSQVPEDPSSGTILVVCHSGIGQALLSTALGEDERSFRRRALPNCGAVELEWIDGYVASTDGGVASMDSDCLANRWRWLIPNTSEWT 261
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BLAST of mRNA_P-littoralis_Contig125.62.1 vs. uniprot
Match: A0A7S4I552_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I552_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.450e-39
Identity = 95/249 (38.15%), Postives = 137/249 (55.02%), Query Frame = 1 
Query:  376 PGDDEDLVSFFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKALASAVD----LDLGPA--VVVSPMGRAQQTLECVREELRKGEASKDFETVEIVPDIREIELFEWQGELKEDIIKKNPEEYAAW-VADPSNFNFSGRYPARDLWARAGDAWEQIRSLQSI-------QDQRRTLVVAHNAINQALLWTALGCDTSYFRKLSWPNCAVLELQWRRGESRAERYRWVVPEASEFVEAGDAVRL 1080
            P     L  +F+LRHG+T+ NA GRIQG+ D S LTE+G SQA   G  +    D    +D GP   V  SP+ RAQ+TL+ +RE         + E V  + ++REI+L++W+G    +I + +PE YAAW + D      SG  P  ++WARAG  WE IRS  ++       ++   TL+V H  + Q LL +ALG D ++FR+  +PNC + E+ W   E  A  +RW  P  SE ++  D   L
Sbjct:   33 PPSSASLHRYFILRHGETDANASGRIQGSADFSRLTERGQSQAARVGSVVFGGSDGEGSID-GPIRHVYASPLTRAQETLQIIREHADPSLIPGEGEIV--LDELREIDLYDWEGRHTSEIEENDPEAYAAWTMGDAHGMEVSGCKPIVEMWARAGRVWEIIRSANAVAGRTDSDENPSSTLLVCHGTLGQGLLSSALGLDETHFRRHDFPNCGMAEIVWYHDEEIARNWRWHHPSRSELMQPFDQTVL 278
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BLAST of mRNA_P-littoralis_Contig125.62.1 vs. uniprot
Match: L1ISC6_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1ISC6_GUITC)

HSP 1 Score: 153 bits (386), Expect = 8.980e-39
Identity = 91/204 (44.61%), Postives = 125/204 (61.27%), Query Frame = 1 
Query:  403 FFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKALASAVDLDLGPAVVVSPMGRAQQTLECVREELRKGEASKDFETVEIVPDIREIELFEWQGELKEDIIKKN-PEEYAAWVAD-PSNFNF-SGRYPARDLWARAGDAWEQIRSLQSIQDQRRTLVVAHNAINQALLWTALGCDTSYFRKLSWPNCAVLELQWRRGE 1005
            F  LRHG+TN+NA GRIQG+ D S LTE+G +QA   G+ L S + +D   +V VSP+ RA+ TLE        G      ++  ++ D+RE++L EW+G LK+  IK+  P+ Y+ W  + P  F   SG+YP RDLW RAG  WE +R  +   + + +L+VAHN INQALL T LG    YFRKL +PNC + E+    GE
Sbjct:   17 FLFLRHGKTNYNAEGRIQGSTDFSRLTEEGEAQASSVGRIL-SDIPID---SVFVSPLTRARMTLELAA----AGSGRNLSDSAMVLDDLREVDLHEWEGMLKKQEIKEMYPDIYSLWRGENPREFKLDSGKYPIRDLWKRAGKVWEVLR--RDAANGKTSLIVAHNGINQALLCTTLGLSEEYFRKLEFPNCGIAEVIVPYGE 210
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BLAST of mRNA_P-littoralis_Contig125.62.1 vs. uniprot
Match: A0A812MB86_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812MB86_9DINO)

HSP 1 Score: 139 bits (351), Expect = 1.550e-33
Identity = 88/204 (43.14%), Postives = 122/204 (59.80%), Query Frame = 1 
Query:  403 FFLLRHGQTNFNAIGRIQGTLDS-SILTEQGISQALEAGKALASAVDLDLGPAVVVSPMGRAQQTLECVREELRKGEASKDFETVEIVPDIREIELFEWQGELKEDIIKKNPEEYAAWVADPSNFNFSGRYPARDLWARAGDAWEQIRSLQSIQDQRRTLVVAHNAINQALLWTALGCDTSYFRKLSWPNCAVLELQWRRGESR 1011
            F L+RHGQT FNA  R QG++D  S+LT +GISQA E G+ L      +   AV VSP+ RA+QTLE  R     GE     ET   + ++REI+L+EWQG  +++I  ++PE    W  +  N   SGRY  RDLW R+ +AW ++R +     + R+LVVAH AI +AL+ TALG     FR L+  N  V+E+ W   E++
Sbjct:   22 FLLVRHGQTTFNAEKRFQGSMDEGSVLTAKGISQAEELGQWLKG----NPVAAVFVSPLLRARQTLEVAR--TVAGEVLPPTETK--LSELREIDLYEWQGRTQDEIRAEDPELMRLWKEETWNLQVSGRYVVRDLWRRSIEAWHRMRQVAP-SGEERSLVVAHGAIIKALISTALGLPEQGFRHLAMSNGEVVEVAWSGSEAK 216
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BLAST of mRNA_P-littoralis_Contig125.62.1 vs. uniprot
Match: R1DPI0_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DPI0_EMIHU)

HSP 1 Score: 132 bits (333), Expect = 6.860e-31
Identity = 91/250 (36.40%), Postives = 131/250 (52.40%), Query Frame = 1 
Query:  397 VSFFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKALASAVDLDLGPAVVVSPMGRAQQTLECVREELRKGEASKDFETVEIVPDIREIELFEWQGELKEDIIKKNPEEYAAWVADPSNFNFSGRYPAR-----DLWARAGDA-WEQIRSLQSI---QDQRRTLVVAHNAINQALLWTALGCDTSYFRKLS------------WPNCAVLELQWRRGESRAERYRWVVPEASEFVEAGDAVRLL 1083
            V F +LRHGQT+ N  G IQG+ D S L+++G +QA E G ALA   D+ +     +SP+ RAQQT E +  +        D  T   +  +REI+L  W+G  K ++  + P+ YAAW  DP      GR P       +LW RA  A W  +R++ +     D+  TLVV H ++ QALL TALG D + +R+              +PNC + E+ W     RA R+RW +PE   + ++G A R L
Sbjct:   20 VRFLVLRHGQTDHNRDGIIQGSSDVSRLSDRGRTQAREVGAALARLGDVRVAR-TFLSPLARAQQTHEILLLD------RPDLPTPTTLDGLREIDLGSWEGRAKAELRAEQPDVYAAWQCDPLAMVVDGRRPRCRKPIVELWERARSAAWPTLRAVDTAAAEDDEGATLVVCHGSLGQALLCTALGLDATAWRRHRLARCTAERARHPFPNCGMAEIDWPADAPRATRWRWRLPEEGCW-QSGTAARAL 261
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BLAST of mRNA_P-littoralis_Contig125.62.1 vs. uniprot
Match: C1EAI4_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EAI4_MICCC)

HSP 1 Score: 135 bits (341), Expect = 1.110e-30
Identity = 77/190 (40.53%), Postives = 117/190 (61.58%), Query Frame = 1 
Query:  409 LLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKALASAVDLDLGPAVVVSPMGRAQQTLECVREELRKGEASKDFETVEIVPDIREIELFEWQGELKEDIIKKNPEEYAAWVADPSNFNFSGRYPARDLWARAGDAWEQIRSLQSIQDQRRTLVVAHNAINQALLWTALGCDTSYFRKLSWPNCAV 978
            L+RHGQ+ +N  GRIQG+ D S+LT++G SQA E  + +      D+G     SP+ RA +T E + +       S+D + +++  ++REI+L+ +QG LKE+   K  ++YAAW ADP+NF   G +P R+LW R  + W+ I       D +  LVVAHNA+NQ+++  ALG  + YFR+LS  NC +
Sbjct:   62 LVRHGQSTWNKEGRIQGSSDLSVLTQKGESQA-EITREMLQGKHFDIG---FRSPLARASRTAEVIWD-------SRDSKLIDLW-ELREIDLYSFQGLLKEEGKAKYGDKYAAWKADPANFEIDGHFPVRELWERGAECWKSILDA----DGQDVLVVAHNAVNQSMVANALGLGSEYFRRLSQSNCGL 235
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BLAST of mRNA_P-littoralis_Contig125.62.1 vs. uniprot
Match: A0A7N0TL60_KALFE (Uncharacterized protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TL60_KALFE)

HSP 1 Score: 133 bits (335), Expect = 1.430e-30
Identity = 81/195 (41.54%), Postives = 115/195 (58.97%), Query Frame = 1 
Query:  409 LLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKALASAVDLDLGPAVVVSPMGRAQQTLECVREELRKGEASKDFETVEIVPDIREIELFEWQGELKEDIIKKNPEEYAAWVADPSNFNFSGRYPARDLWARAGDAWEQIRSLQSIQDQRRTLVVAHNAINQALLWTALGCDTSYFRKLSWPNCAVLELQW 993
            L+RHGQ+ +NA GRIQG+ + S+LTE+G SQA E  + + +A   D+      SP+ R+++T E +    RK +   D+       D+REI+L+ +QG LK +   K  + Y+ W  D SNF   G YP R+LW+RA   W+++ +     D R  LVVAHNA+NQAL+ TALG    YFR L   NC V  L +
Sbjct:   80 LVRHGQSTWNAEGRIQGSSNFSVLTEKGESQA-EVSRQMLAADQFDV---CFASPLNRSKRTAEVIWGS-RKEKIITDY-------DLREIDLYSFQGLLKHEGKSKFGDAYSHWQTDASNFYIDGHYPVRELWSRARSCWKKVLAY----DGRSVLVVAHNAVNQALIGTALGLGPEYFRVLVQSNCGVSALDF 258
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.62.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFT7_ECTSI5.800e-17178.93Plastid phosphoglycerate mutase protein n=2 Tax=Ec... [more]
Q00GN2_KARBR5.330e-4442.39Plastid phosphoglycerate mutase protein (Fragment)... [more]
A0A7S0F1H7_9CRYP3.820e-4342.92Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S4C0X0_CHRCT5.270e-4140.16Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4I552_9STRA1.450e-3938.15Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
L1ISC6_GUITC8.980e-3944.61Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A812MB86_9DINO1.550e-3343.14Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
R1DPI0_EMIHU6.860e-3136.40Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
C1EAI4_MICCC1.110e-3040.53Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A0A7N0TL60_KALFE1.430e-3041.54Uncharacterized protein n=2 Tax=Kalanchoe fedtsche... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig125contigP-littoralis_Contig125:256222..262536 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LFT7
PFAMsHis_Phos_1
Model size2396
Max annot lvl2759|Eukaryota
KEGG koko:K22200
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0047538
Exons5
Evalue1.86e-178
EggNOG OGsCOG0588@1|root,KOG0235@2759|Eukaryota
Ec32 ortholog descriptionplastid phosphoglycerate mutase protein precursor
Ec32 orthologEc-01_000980.1
EC3.1.3.63
Descriptionregulation of pentose-phosphate shunt
Cds size1008
COG categoryG
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig125.62.1prot_P-littoralis_Contig125.62.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig125 256781..261259 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789547.7559144-UTR-P-littoralis_Contig125:256221..2563201680789547.7559144-UTR-P-littoralis_Contig125:256221..256320Pylaiella littoralis U1_48UTRP-littoralis_Contig125 256222..256320 +
1680789547.7684302-UTR-P-littoralis_Contig125:256768..2567801680789547.7684302-UTR-P-littoralis_Contig125:256768..256780Pylaiella littoralis U1_48UTRP-littoralis_Contig125 256769..256780 +
1680789547.816017-UTR-P-littoralis_Contig125:261259..2625361680789547.816017-UTR-P-littoralis_Contig125:261259..262536Pylaiella littoralis U1_48UTRP-littoralis_Contig125 261260..262536 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789547.7768428-CDS-P-littoralis_Contig125:256780..2571251680789547.7768428-CDS-P-littoralis_Contig125:256780..257125Pylaiella littoralis U1_48CDSP-littoralis_Contig125 256781..257125 +
1680789547.787331-CDS-P-littoralis_Contig125:259529..2597681680789547.787331-CDS-P-littoralis_Contig125:259529..259768Pylaiella littoralis U1_48CDSP-littoralis_Contig125 259530..259768 +
1680789547.796301-CDS-P-littoralis_Contig125:260260..2603531680789547.796301-CDS-P-littoralis_Contig125:260260..260353Pylaiella littoralis U1_48CDSP-littoralis_Contig125 260261..260353 +
1680789547.8065388-CDS-P-littoralis_Contig125:260928..2612591680789547.8065388-CDS-P-littoralis_Contig125:260928..261259Pylaiella littoralis U1_48CDSP-littoralis_Contig125 260929..261259 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig125.62.1

>prot_P-littoralis_Contig125.62.1 ID=prot_P-littoralis_Contig125.62.1|Name=mRNA_P-littoralis_Contig125.62.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=336bp
MRRPGSHLRSDPPGGLVLALAAARKSFARAFCFGGSTTRGHVAVGSGGIG
KRLFGGMYNAEKSGNGSGSARPAGSPISAATPPESPFPPGDDEDLVSFFL
LRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKALASAVDLDLGPAV
VVSPMGRAQQTLECVREELRKGEASKDFETVEIVPDIREIELFEWQGELK
EDIIKKNPEEYAAWVADPSNFNFSGRYPARDLWARAGDAWEQIRSLQSIQ
DQRRTLVVAHNAINQALLWTALGCDTSYFRKLSWPNCAVLELQWRRGESR
AERYRWVVPEASEFVEAGDAVRLLKDGEDDNRYTL*
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mRNA from alignment at P-littoralis_Contig125:256222..262536+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig125.62.1 ID=mRNA_P-littoralis_Contig125.62.1|Name=mRNA_P-littoralis_Contig125.62.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6315bp|location=Sequence derived from alignment at P-littoralis_Contig125:256222..262536+ (Pylaiella littoralis U1_48)
TTCGGCTGTCGGCCCCCACCCCTTCTCACAGAACCTAACAGCACCGGCTA
AACAGATCATACAGCAGGTGCGAGTGTGGTACCTGGACGCCGTTTTCAGG
TGTGTGTGACAACGCAGTTAAGGGTTCATCTGGGTACTTCAGAGCCACAA
TATGGAGATAGAGCGATGAGCAGACAGAGCGATGAGACATAGAGCGAAGC
ACATGTCTTGTCAGCCGTTTCGCGTTCTCTCCGAGTTCGTCGCGCTCTCT
CCGACGGATTCGGACGAATCCCGTACCCACAGCGGTACAGCACTCGGGGA
AACAGATATACTGCATGGCTCTCAAGTGCATACCCCACGTGAAACCAAAC
ACCGCCACCATCATACATCATTCATTTATGCTGGAGCCGCCCGCTCACTT
GGGATCCTTGTTTCCTCCTATCATGTGATATAAAATCCGTTGTTTGTTTC
ATTGCCTTTCATCGATCATAACAGACAGGCAATCAAACATCAACCCCTAA
CCGCTGCGGTCACACCTTCCTTCTGTCTACTTGAACCCTGCTGGCAGAAA
CAGCAGATCATGCGGAGACCCGGCAGTCACCTGCGATCGGACCCACCGGG
GGGACTCGTGCTAGCTCTGGCCGCCGCTCGAAAGAGCTTCGCGAGGGCCT
TCTGCTTCGGCGGCAGCACCACTCGCGGCCATGTTGCAGTCGGGAGCGGC
GGCATTGGGAAGCGGCTGTTTGGAGGGATGTACAATGCGGAGAAATCTGG
GAATGGTTCCGGTTCTGCTCGGCCTGCTGGCAGTCCAATATCTGCTGCCA
CTCCGCCAGAGTCTCCCTTTCCTCCCGGGGACGATGAAGACCTCGTCTCC
TTCTTCTTGCTGCGACACGGGCAGACCAATTTTAACGCCATAGGGCGCAT
CCAGGTTCGTGGGGCTCTACGATAGTGGTATACCCGTAAGTTCCGGAAGC
GCTCGCCTCTTGTGCCCCGAAAATTTCCAGGGATTCTGTCTGTCCAGCAC
CACTCGTCCTGCGGCTTTCAGAAGACACCCTCTTGCGGAAGAGAAATGTA
TGCCGAAAGGACTAGGATTGCGTCCAGAATATATAGGATAACAACACTCA
CACCTACTGTAGTAGAAACACATCACAATATGCAATATGCAAGCGTCGTT
TGTATGATATATACGCATGCGTCGATAGAAATGTATCATGACCAACAGCC
AACCAGTGGTCGGTTTACGCACCGACCAACCCGGGTACCAAGTCCTTTCC
CTGCAAGTTGCGGTCGAACGGGCACGCCGATGCCGTCACGGCATGACATT
TGTGCATCACAACAATCGCCAAGACGAAAAGTACACCTGTAGTACGACAG
CCGTGTGCTGCTGCATATCGATATACCCGTGCAGTCGTCACGAGCGATTT
ACCGTGGGCCGACCTCTGTCTACCCTAGGTCGCGTGAGATACCACGTGAC
CCCCTGGAACGGTTTTCGAAAATCGATTATTGTACTGCTCACTTGTTTGT
GAGCAGAAAAACAGTCTTGGCTGCAAGAATGGCGATGGACCGGCGTCGGA
ACCATTTCGTCAAGAGCTTTCCCACAACGTCTTAGTGTTCCGTAAAGTGA
TACAATACACGAAGTACTTCGTACTATTGTTTAACCCTTCTGGACTTCTA
AGGTGATAAATGCATAAAAAAAAATCATCATAATATATAGGTCCGGAGTA
TAAGCCAGTCTCGGACGGGGACAGAAACAAAAATTCCCGAACCCCATCAC
TTTGAGAATTGAGCAGCATTCCGGCTGCACTGAGATACGGGCAAGAGGAC
AAACAAACACCGCTCACAGCTGCTGCTGTGTGTGTGGTCAAGGGGTGTGA
GGGTGCCCAGCAAGACTCAGTCAACATAATAAATCCCCGGCATGTCGAAA
TCTGATATCATCTCGTCTGACACAGCAGTATAATATACACTTCGCAGTAT
ATCATATTTTTCTGGAGTGCAACACCACACCAGCATTGTAGCAGCACTGC
TCCTACTACAACTACTGCTACTACTGCCGCTGCTGTACAGCAGTACATCA
CATGCCATATGATACCTCCTCCCTTGTTGGTGTGACACAACAAGCAAGAA
GAGCAGCAGTAGTAGAGTCATAGCTCTATGTATGACACATCATGATATCT
TATTTATTACTTCGACGTATCTTGTTTGGTCAAAACCCAGCGACAACAGC
AGCAGCAGCATGTATGTAGTATGTAGATACATGCGATTAGTTGCTAGAAT
ACTACTGCGGCTGCTGCTGCTGCTGCCGCTACCAGTACCAATGATGTACC
TATGTGCGAGAAGGGACAGAGGACCGGCCTTCAGGCCGGCCGCAGGCCAC
GGGGCCCCCACCCAAAAGTACGTTTAGCAGGCCGGGAGCTACAGCGGGAA
ACGAGTAACTCCTTAGCAGTAACTATTTTTCCTTATTATCTTGTTTTGAG
GTGACTGGATACGTTAAGCGCTTTTAGTGGTTAGAACACGTTGCACGACG
CCTGAGAGCCAGCCGCGGCATCTCGACCACCGGGTATGCCTTCTGTAATC
TCCAGGGACGTAACCAGCCCGCTGTGAGCCCCCGTCAGGGGCCCTGGCTG
TATATCTTTGTGGTGCTGATGTGTACATTTTCTCTTGGTTTCGTGACTGC
TGTACATTTGAAAGGGACATACTCCGGAGTATACATTTGAGCCATATATT
TTTTTTCTCGGGGGAACATCGTATGGTTCTGATTTGGAACCCGGACTGTT
CGTGTGAAAAGGAACAAAACACCCTGGTCCCAGAAGGGTTAATGTTGGCA
CCCGTATCTTACCCGCCCTACGGCACGACGCTCCTAACCCAAGCCAACAT
CCGACGCTAAAGTGATCTCAACGCTGAGCTTATGTCGACCTAACGGCCAG
CCGGGGGTCCAACGGGGCCTTCGGCCCCGCTTCACTGTGGGTTACCACGA
TATGGGTTTGTGTGTCTGCGTTGTCGTCCCATCTAGTTCTGGACGCCACT
CTACCCCTTTCGGGATAGTAAGTAGACCAGCCGGGGTCACACCAGAAGAA
GTCAACACAGGATTTTTCTTTTTTCATGACGGCTTGAAAAAACATACCAA
GCACGGAGTGTATTATATACGAATTAGTGTTGTAAATATATCGTTGACCC
ACGAGGCTGAGCGGCTGCACGCTGTGTAATCGCGGCTGCTCTTCCCGGAT
GTGTTGTTCGCTGCACCCCGAAAGAAGCAGCAGCAGTCACCTAAATGTCT
TCACATCCCGGAACTAACTTGCCTGGCCTTGGTCCCGTCTCTACCTCGAC
TACGACAGGGAACGCTAGACTCGTCAATCCTGACGGAGCAGGGGATCTCG
CAAGCCTTGGAGGCTGGCAAGGCCCTGGCCTCCGCCGTTGACCTCGACCT
AGGCCCCGCTGTCGTAGTGTCCCCCATGGGCAGGGCGCAGCAGACGCTCG
AGTGCGTGAGGGAGGAGCTCCGGAAGGGTGAGGCGAGCAAGGACTTCGAG
ACGGTGGAGATTGTGCCCGACATTCGGGAGATTGAGCTCTTCGAGTGGTG
AGTGAGGTTTGCTTTATTTTCGAGAGTGTACTCTGCGTCGTAAGACTGCG
GTGCGTGGTTTGCTCTTTATTTTCAGCAAGGTTTCAAAGAGTCGTCAGAC
TGCGTGCGCTTTTTGATGCGGTCCCACACGCAGAGCTCATCTGCGCGTTT
CGTGAATCTCCTGTACCTCGGCACAGCAGGGAGAAAACGATCCAGCTGTG
AATACCGCAGATAGCCATACGTCTGATACAGCAGTCTTCACCTCCTCAAG
AACTTCCCGTTACAGCAGTTTGTTTCCAAGCCTCTTGTCCCTCACAGGTT
GGTTGCAGTAATTGTTTTCGACGACTTTCACAGCAGTAGTCGCCAGTTTT
CCCCCATCATACCATGCTTCAGGCTGTTCAGTCCCCATGATACTCATAAT
CATGTTGATTTTGCGATACTGTCAAACCCAACGCTTTGGACGGATTGCGT
CCTACGCGCCGTTATTACCCCTCTGCGGGCCCCGCGCAGGCAAGGAGAGC
TAAAGGAAGACATTATCAAGAAAAATCCGGAGGAGTACGCCGCGTGGGTG
GCAGACCCGTCAAACTTTAACTTCTCGGGAAGGTGAGAAAGTGCGAAACA
ACGTTGTGATCGCGCTCTTTACCTACTGCAACAGCAGTTGTATTGTACAG
ACAGGGTGTAATTTTTTTTTAATGGGTTTTCTACTGCTGTATTGAATTCG
GTTCAAGTTGTTCTGCCTGCGGCGTGAGCCCTCGGGCATAGGTTTGCCCG
AAGTGCTGTGCAATCGTTGTTCCAGGGTTGTGCCAGACGAGCTGGCGGCG
ATCAATCGGCCTCTCGGTCGTTTCTCTGGAAGTGTTAATTGTGCGCGGTA
TTGTCCCCCCCTGTATCCGACCGGTCGTCTCTTATCTCCGTGGATAGCAG
CCGACGCCACTAGTTTTGTCGCAGGAAATGACGTATCTCCTCGTTGTCGC
CGTGTTCTCCCCCATTGCTCACCTTCCCGTCTACATCTCTGATGCGGTAC
ATCACAGCACATCGTATCACATCAACACGTGCCCCCCCCCTCCCTCCCCG
ATAAACGGCGGCAGGACGGGAATCCGCATGACACCCGCATTTAATAGCAT
TTTCGTAACACCCACATGGTATCCAATCCACGTGGCACCTTACCCCGAAA
CCAACAGATACCCCGCCAGAGACCTCTGGGCAAGGGCCGGCGACGCCTGG
GAGCAGATCCGCTCCCTCCAGTCCATACAGGACCAGCGCCGAACCCTCGT
CGTCGCGCATAACGCTATCAACCAGGCCCTGCTCTGGACCGCGCTCGGCT
GCGATACGTCGTACTTCCGGAAGCTGTCGTGGCCCAACTGCGCCGTGCTG
GAGCTGCAGTGGCGGCGCGGGGAATCGAGGGCCGAGCGATACCGGTGGGT
TGTTCCCGAGGCGTCGGAGTTCGTGGAGGCGGGCGACGCTGTGCGGCTGC
TGAAAGACGGCGAGGATGACAACCGATACACCCTTTGAATTGCTTTTTGG
AATTGCTTTTTGGGTCTGATTTGTGAAAATGGTTGTGTCGGGTGTACGAA
GAAGCTGGGGTGGAAGATGGGAAAACAGATATTGTAACAACCCGGTTTTT
TTTCTGCGGGTCCTGCGGAGCCGCTGGAGGAAAGAGCAGGATGACAACAA
GACACGCAAGGCCCCTATTGGATTGGACCTACAGCAGTTGCTGTGTATTC
GAGGCTGCTGAAAGATTGGAAAGGATGGCAAATGGATCTGGACTGGATTT
TGCGGATGCGGAACTGCTTGAAAATCGGAGAAGGACAGACGGCAACTGAT
CGACACACATCCCGTTGAGATGGGGCGACCTGGCTGCTCAAATATGGACG
GGTCATTTTTGTCGAAACGACTTTCGGGTTGGAGTATGGCTGTGTGGACT
CGTATCGGCTGGTGAAAAATGAGGAGGATGACAGCCGGTGCGCGCCCTGC
GAGATCTTGAGGGCTGGACGACTATGATTCCGTTTGGTTCCGCTCAAGAT
GGACTGCCCGTCACTTGCGTCCAGGTCAACCACAAGTGCCTCTTGGTGTT
ATGCGGTGGGAGTATATTTAGAGGGCGTGCACGCTATTGGGGGCACCCTA
GAACTGTCAAGTGCTGTGGATGAAATCGTGACTGTTGAAGCGCTGCATGG
TTCGTTGTTTTGTAAAGACTTCTTTGCTTGAAGTATGACGAGCATTATCT
CACTTCGTTATGGACGAAGGGTTATAAATATTGGGCATCGTTCGAAGTAG
TTCTATTCTGAGGGCGGTTAGTGTATGTCCCGAATCGTTTGTTTCTACGA
AGTATAGAATTAAGAGGCTCGTCGCTTGCGTGGGGAATGGTGTTTGGAGC
GGCGGCGTCTGTCGAAGTAAGATTGGTGTGTGTACAGGACGTGTGTGTGG
ATGTGGCTGACTCGATATAGATTCCAGATTTCACGAAAAGTTGCCCCTCG
TGTATTTTTGCGTGCTTGCTCAACTAGGGTAGACCAGACGATGGTTGGAT
CAGCCTGCACCGCCACCGTTGCCGTGTGTACTACATGTACTTTGGAAGGC
AAATGCTATTTAGATAGAAGCGTTTGAGATGCATGTTTTATTTTGTTCTT
GTCTGGGTAGCGTACATTTTTAGAGCCGGCTTTTGGGCGTTTTTTATTTT
TCCCCTTGGTAGCGATAGAAGCTATCGTAAATTTCTCAGTTGGAGGTGCT
GTGCAGTGAGAACAGGCGTATTGCTGAATTAAACCACTCTTGTGAACAAG
GCTGCCAGGGTTAAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig125:256222..262536+

>mRNA_P-littoralis_Contig125.62.1 ID=mRNA_P-littoralis_Contig125.62.1|Name=mRNA_P-littoralis_Contig125.62.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1008bp|location=Sequence derived from alignment at P-littoralis_Contig125:256222..262536+ (Pylaiella littoralis U1_48)
ATGCGGAGACCCGGCAGTCACCTGCGATCGGACCCACCGGGGGGACTCGT
GCTAGCTCTGGCCGCCGCTCGAAAGAGCTTCGCGAGGGCCTTCTGCTTCG
GCGGCAGCACCACTCGCGGCCATGTTGCAGTCGGGAGCGGCGGCATTGGG
AAGCGGCTGTTTGGAGGGATGTACAATGCGGAGAAATCTGGGAATGGTTC
CGGTTCTGCTCGGCCTGCTGGCAGTCCAATATCTGCTGCCACTCCGCCAG
AGTCTCCCTTTCCTCCCGGGGACGATGAAGACCTCGTCTCCTTCTTCTTG
CTGCGACACGGGCAGACCAATTTTAACGCCATAGGGCGCATCCAGGGAAC
GCTAGACTCGTCAATCCTGACGGAGCAGGGGATCTCGCAAGCCTTGGAGG
CTGGCAAGGCCCTGGCCTCCGCCGTTGACCTCGACCTAGGCCCCGCTGTC
GTAGTGTCCCCCATGGGCAGGGCGCAGCAGACGCTCGAGTGCGTGAGGGA
GGAGCTCCGGAAGGGTGAGGCGAGCAAGGACTTCGAGACGGTGGAGATTG
TGCCCGACATTCGGGAGATTGAGCTCTTCGAGTGGCAAGGAGAGCTAAAG
GAAGACATTATCAAGAAAAATCCGGAGGAGTACGCCGCGTGGGTGGCAGA
CCCGTCAAACTTTAACTTCTCGGGAAGATACCCCGCCAGAGACCTCTGGG
CAAGGGCCGGCGACGCCTGGGAGCAGATCCGCTCCCTCCAGTCCATACAG
GACCAGCGCCGAACCCTCGTCGTCGCGCATAACGCTATCAACCAGGCCCT
GCTCTGGACCGCGCTCGGCTGCGATACGTCGTACTTCCGGAAGCTGTCGT
GGCCCAACTGCGCCGTGCTGGAGCTGCAGTGGCGGCGCGGGGAATCGAGG
GCCGAGCGATACCGGTGGGTTGTTCCCGAGGCGTCGGAGTTCGTGGAGGC
GGGCGACGCTGTGCGGCTGCTGAAAGACGGCGAGGATGACAACCGATACA
CCCTTTGA
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