mRNA_P-littoralis_Contig125.53.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig125.53.1
Unique NamemRNA_P-littoralis_Contig125.53.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig125.53.1 vs. uniprot
Match: D8LFT9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT9_ECTSI)

HSP 1 Score: 471 bits (1211), Expect = 3.320e-157
Identity = 240/266 (90.23%), Postives = 253/266 (95.11%), Query Frame = 1 
Query:   52 MSEQPSFLSSLAAGGMAGTAVDVALYPLDTIKTRLQSPEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPKSPYSHMAAASLAETVACLVRVPTENVKQKMQAGLHSTAAETVSAILKNGGLGGFYTGYLTTVVREIPFSFIQFPIYERLKVTWAERRGGPLEPYEAAGCGAVSGSFAAAVTTPMDVVKTRLMLGADKHGTTYRGLGNTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTQLMGLG 849
            MSEQPSF++SL AGGMAGTAVDVALYPLDTIKTRLQSPEGFVK+GGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDP SP +HMAAAS+AET+ACLVRVPTENVKQKMQAGLH TA ET++AILKN G+ GFYTGYLTTVVREIPFSFIQFPIYE LK  WA+RRGGPLEPYEAAGCG+VSG+FAAAVTTPMDVVKTRLMLG DKHG TYRGLG+TFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKT LMGLG
Sbjct:    1 MSEQPSFVASLLAGGMAGTAVDVALYPLDTIKTRLQSPEGFVKSGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPDSPLAHMAAASVAETMACLVRVPTENVKQKMQAGLHGTATETMNAILKNSGMMGFYTGYLTTVVREIPFSFIQFPIYEGLKAAWAKRRGGPLEPYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGTDKHGETYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTWLMGLG 266
[Close]
BLAST of mRNA_P-littoralis_Contig125.53.1 vs. uniprot
Match: A0A835YJ97_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ97_9STRA)

HSP 1 Score: 348 bits (894), Expect = 5.570e-110
Identity = 179/269 (66.54%), Postives = 213/269 (79.18%), Query Frame = 1 
Query:   52 MSEQPSFLSSLAAGGMAGTAVDVALYPLDTIKTRLQSPEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHAL-DPKSPYSHMAAASLAETVACLVRVPTENVKQKMQAGL---HSTAAETVSAILKNGGLGGFYTGYLTTVVREIPFSFIQFPIYERLKVTWAERRGGPLEPYEAAGCGAVSGSFAAAVTTPMDVVKTRLMLGADKHGTTYRGLGNTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTQLMGL 846
            M  QPSF+ +L +GG+AGT+VDVAL+PLDTIKTRLQS +GF+KAGG +GVYNGLSAAAVGSAPGAA FFS+YE  K  L DP +P +HMAAAS AE VACLVRVPTENVKQKMQAG+    S+A  T  +IL   G  GFY GY+TT++REIPFS IQFP+YER+K  W  RRG P+  Y+AA CG++SG+FA A+TTP DVVKTRLMLGADKHG  Y+G+  TF+R+  +EGAAAL  G+ PRV WIGIGGFVFFG YE +K  L G+
Sbjct:    1 MPHQPSFVLALVSGGIAGTSVDVALFPLDTIKTRLQSSQGFIKAGGFKGVYNGLSAAAVGSAPGAAAFFSTYEGLKVRLGDPSAPSTHMAAASGAEIVACLVRVPTENVKQKMQAGVGTSSSSAVATCRSILSASGARGFYAGYMTTIMREIPFSLIQFPLYERMKAVWGRRRGAPVHSYQAAVCGSLSGAFAGALTTPFDVVKTRLMLGADKHGLPYKGMVPTFQRIVADEGAAALFGGIVPRVMWIGIGGFVFFGAYEASKRTLAGV 269
[Close]
BLAST of mRNA_P-littoralis_Contig125.53.1 vs. uniprot
Match: A0A7S2Y3T2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3T2_9STRA)

HSP 1 Score: 321 bits (822), Expect = 2.540e-99
Identity = 172/268 (64.18%), Postives = 205/268 (76.49%), Query Frame = 1 
Query:   46 MVMSEQPSFLSSLAAGGMAGTAVDVALYPLDTIKTRLQSPEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKH----ALDPK-SPYSHMAAASLAETVACLVRVPTENVKQKMQAGLHSTAAETVSAILKNGGLGGFYTGYLTTVVREIPFSFIQFPIYERLKVTWAERRGGPLEPYEAAGCGAVSGSFAAAVTTPMDVVKTRLMLG-ADKHGTTYRGLGNTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKT 831
            MV  E+ SFL +L +GG AGT+VDVAL+PLDTIKTRLQS EGFVKAGG RG+Y GLSAAA GSAPGAALFFSSYEA+K       D K +P  HM +AS+ ETVACLVRVPTE VKQ+MQ G + +  E VS I+K  G GGFYTGYLTTV REIPFSFIQFP+YE LK  W+E +G  + P ++A CG++SG  AA +TTP+DVVKTRLMLG AD HG  Y G+ +T +++Y +EG   L +G +PRVTWI IGGFVFFG YE AK+
Sbjct:    1 MVSQEKNSFLVNLLSGGCAGTSVDVALFPLDTIKTRLQSSEGFVKAGGFRGIYRGLSAAAAGSAPGAALFFSSYEASKEWGTKTFDEKYAPLVHMGSASVGETVACLVRVPTEVVKQRMQTGQYGSFREAVSTIMKTEGPGGFYTGYLTTVAREIPFSFIQFPMYEGLKKYWSEWQGKEVGPSQSALCGSISGGIAAGITTPLDVVKTRLMLGQADLHGVKYEGMLSTLQKIYVQEGMPKLFAGFSPRVTWISIGGFVFFGSYEAAKS 268
[Close]
BLAST of mRNA_P-littoralis_Contig125.53.1 vs. uniprot
Match: A0A7S1UH46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH46_9STRA)

HSP 1 Score: 315 bits (808), Expect = 3.860e-97
Identity = 164/260 (63.08%), Postives = 198/260 (76.15%), Query Frame = 1 
Query:   79 SLAAGGMAGTAVDVALYPLDTIKTRLQSPEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPK---SPYSHMAAASLAETVACLVRVPTENVKQKMQAGLHSTAAETVSAILKNGGLGGFYTGYLTTVVREIPFSFIQFPIYERLKVTWA-ERRGGPLEPYEAAGCGAVSGSFAAAVTTPMDVVKTRLMLGADKHGTTYRGLGNTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTQLMGL 846
            SL +GG+AGT VDV L+PLDTIKTRLQ+PEGF+K+GG  G++ G+SAAAVGSAPGA+LFF SYE AK  L+P+   +P +HMAAASL E  AC+VRVPTE +KQ+MQA +  TA   +  +L   G+ G + GY +TV REIPFS IQFP+YE LK  WA  +  G L PYE+A CG+VSG+F+AAVTTP+DVVKTRLMLGADK G  Y G+ +TFRRV  +EGAAAL  GV PRV WI IGGF FFG YEG K  LMG+
Sbjct:   25 SLISGGVAGTTVDVVLFPLDTIKTRLQAPEGFMKSGGFNGLFKGVSAAAVGSAPGASLFFMSYETAKQNLEPRMESAPVAHMAAASLGEVAACVVRVPTEIIKQRMQANMFPTAQGALRNVLDTEGVLGLWRGYGSTVAREIPFSLIQFPLYEHLKKVWAASKASGELRPYESALCGSVSGAFSAAVTTPLDVVKTRLMLGADKAGVAYDGMASTFRRVVADEGAAALFKGVQPRVMWISIGGFFFFGAYEGTKASLMGM 284
[Close]
BLAST of mRNA_P-littoralis_Contig125.53.1 vs. uniprot
Match: A0A1V9ZD58_9STRA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD58_9STRA)

HSP 1 Score: 310 bits (795), Expect = 2.110e-95
Identity = 160/267 (59.93%), Postives = 194/267 (72.66%), Query Frame = 1 
Query:   55 SEQPSFLSSLAAGGMAGTAVDVALYPLDTIKTRLQSPEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPK------SPYSHMAAASLAETVACLVRVPTENVKQKMQAGLHSTAAETVSAILKNGGLGGFYTGYLTTVVREIPFSFIQFPIYERLKVTWAERRGGPLEPYEAAGCGAVSGSFAAAVTTPMDVVKTRLMLGADKHGTTYRGLGNTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTQL 837
            S   SF +SL AGG+AGT+VDVAL+PLDTIKTRLQS +GF+KAGG +GVY GLSAAA GSAPGAALFFS+YE +K  L  K      SP  HM+AA+  ET ACLVRVPTE VKQ MQ G  S    ++  +    G+ GFY GY + + REIPFSFIQFP++E LK TW+++RG  + P++ A CG++SG  AA++TTP+DVVKTRLMLG D HG  YRG+ +TF RVYT+EG   L SG+ PR  WI IGGFVFFG YE A   L
Sbjct:    5 SSSKSFFTSLIAGGIAGTSVDVALFPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETSKEVLQNKLPHLSNSPLIHMSAAACGETAACLVRVPTEIVKQNMQTGALSGFQHSIKTLYAANGIAGFYRGYWSMLAREIPFSFIQFPLWEGLKATWSKQRGEQVSPFQGAICGSISGGIAASITTPLDVVKTRLMLGKDAHGVEYRGMKDTFMRVYTDEGWQTLFSGIKPRTMWISIGGFVFFGAYESASAFL 271
[Close]
BLAST of mRNA_P-littoralis_Contig125.53.1 vs. uniprot
Match: A0A024U5F9_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024U5F9_9STRA)

HSP 1 Score: 305 bits (780), Expect = 3.490e-93
Identity = 159/263 (60.46%), Postives = 188/263 (71.48%), Query Frame = 1 
Query:   67 SFLSSLAAGGMAGTAVDVALYPLDTIKTRLQSPEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDP------KSPYSHMAAASLAETVACLVRVPTENVKQKMQAGLHSTAAETVSAILKNGGLGGFYTGYLTTVVREIPFSFIQFPIYERLKVTWAERRGGPLEPYEAAGCGAVSGSFAAAVTTPMDVVKTRLMLGADKHGTTYRGLGNTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTQL 837
            SFL+SL AGGMAGT VDVALYPLDTIKTRLQS +GF+KAGG +GVY GLSAAA GSAPGAALFFS+YE  K  L         SP  HMA+A++ ET  CLVRVPTE VKQ +Q G   +  E++ +I    G+ GFY GY + + REIPFSFIQFP++E +K  W   +G  + P + A CG++SG FAA VTTP+DV+KTRLMLG D  G  YRG+ + F RVYT+EG   L SGV PR TWI IGGFVFFGVYE A   L
Sbjct:   11 SFLTSLIAGGMAGTGVDVALYPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETTKRFLQQLQPHLADSPVVHMASAAMGETAGCLVRVPTEIVKQNLQTGAFQSFQESIRSIYGTSGVAGFYRGYWSLLAREIPFSFIQFPLWEGMKTAWGHHQGEIVSPVQGAVCGSISGGFAAFVTTPLDVIKTRLMLGKDAQGVEYRGMRDAFTRVYTQEGWQTLFSGVKPRTTWITIGGFVFFGVYEQASATL 273
[Close]
BLAST of mRNA_P-littoralis_Contig125.53.1 vs. uniprot
Match: A0A067C9P7_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C9P7_SAPPC)

HSP 1 Score: 303 bits (777), Expect = 9.570e-93
Identity = 158/263 (60.08%), Postives = 190/263 (72.24%), Query Frame = 1 
Query:   67 SFLSSLAAGGMAGTAVDVALYPLDTIKTRLQSPEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDP------KSPYSHMAAASLAETVACLVRVPTENVKQKMQAGLHSTAAETVSAILKNGGLGGFYTGYLTTVVREIPFSFIQFPIYERLKVTWAERRGGPLEPYEAAGCGAVSGSFAAAVTTPMDVVKTRLMLGADKHGTTYRGLGNTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTQL 837
            SF +SL AGG+AGT+VDVAL+PLDTIKTRLQS +GF+KAGG +GVY GLSAAA GSAPGAALFFS+YE AK AL         SP+ HM AA+  ET ACLVRVPTE VKQ MQ G  +    ++  +    G+ GFY GY + + REIPFSFIQFP++E LK TW+ ++G  +   + A CG++SG  AA++TTP+DVVKTRLMLG D +G  YRG+ +TF RVYTEEG   L SGV PR  WI IGGFVFFG YE A   L
Sbjct:   10 SFFTSLVAGGIAGTSVDVALFPLDTIKTRLQSSQGFIKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETAKEALQTHLPHMANSPFIHMGAAACGETAACLVRVPTEIVKQNMQTGALNGFQHSIKTLHAANGIAGFYRGYWSMLAREIPFSFIQFPLWEGLKATWSAKQGEQVSALQGALCGSISGGIAASITTPLDVVKTRLMLGKDANGVEYRGMKDTFMRVYTEEGWQRLFSGVKPRTMWISIGGFVFFGAYETASASL 272
[Close]
BLAST of mRNA_P-littoralis_Contig125.53.1 vs. uniprot
Match: A0A6G0XXM9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXM9_9STRA)

HSP 1 Score: 297 bits (761), Expect = 1.120e-90
Identity = 152/253 (60.08%), Postives = 186/253 (73.52%), Query Frame = 1 
Query:   97 MAGTAVDVALYPLDTIKTRLQSPEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPKSPYS------HMAAASLAETVACLVRVPTENVKQKMQAGLHSTAAETVSAILKNGGLGGFYTGYLTTVVREIPFSFIQFPIYERLKVTWAERRGGPLEPYEAAGCGAVSGSFAAAVTTPMDVVKTRLMLGADKHGTTYRGLGNTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTQL 837
            MAGT VDVALYPLDTIKTRLQS +GF+KAGG +GVY GLSAAA GSAPGAALFFS+YE+ K  L  ++P+       HMA+A++ ET  CL+RVPTE VKQ +Q G + T  E+VS+I  N G+ GFY GY + + REIPFSFIQFP++E LK +W + +G P+ P + A CG++SG  AA +TTP+DVVKTRLMLG D  G  Y+G+ + F RVYT+EG   L SGV PR  WI IGGFVFFGVYE A   L
Sbjct:    1 MAGTGVDVALYPLDTIKTRLQSSQGFIKAGGFKGVYKGLSAAAAGSAPGAALFFSTYESTKSFLQKQNPHLADSPAIHMASAAMGETAGCLIRVPTEIVKQNLQTGAYKTFQESVSSIYANKGIAGFYRGYWSLLAREIPFSFIQFPLWEGLKASWGKYQGEPVSPVQGAICGSISGGIAAFITTPLDVVKTRLMLGKDAQGVEYKGMRDAFTRVYTQEGWQTLFSGVKPRTMWITIGGFVFFGVYEQASASL 253
[Close]
BLAST of mRNA_P-littoralis_Contig125.53.1 vs. uniprot
Match: W7TQP7_9STRA (S-adenosylmethionine mitochondrial carrier protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP7_9STRA)

HSP 1 Score: 294 bits (753), Expect = 6.000e-89
Identity = 154/255 (60.39%), Postives = 186/255 (72.94%), Query Frame = 1 
Query:   88 AGGMAGTAVDVALYPLDTIKTRLQSPEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPK-----SPYSHMAAASLAETVACLVRVPTENVKQKMQAGLHSTAAETVSAILKNGGLGGFYTGYLTTVVREIPFSFIQFPIYERLKVTWAERRGGPLEPYEAAGCGAVSGSFAAAVTTPMDVVKTRLMLGADKHGTTYRGLGNTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTQL 837
            AGG AGTAVD++L+PLDTIKTRLQ+ EGF KAGG RGVY GL AAA GSAPGAALFFS YE  K   +P      +P  HM AAS+ ET ACL+RVPTENVKQ +QAG ++T AE +  I K  G+ GFY G+L+TV REIPFSF+QFP+YE  K  WA+ +G P+ P +AA CG+V+G+ AAAVTTP+DV+KTRL+L  D  G  Y G+ + FRRV  EEG   L +GV PRV WI IGGFV+FG YE  +  L
Sbjct:   19 AGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVRRLL 273
[Close]
BLAST of mRNA_P-littoralis_Contig125.53.1 vs. uniprot
Match: L1IQF6_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IQF6_GUITC)

HSP 1 Score: 292 bits (747), Expect = 1.700e-88
Identity = 148/266 (55.64%), Postives = 188/266 (70.68%), Query Frame = 1 
Query:   52 MSEQ-PSFLSSLAAGGMAGTAVDVALYPLDTIKTRLQSPEGFVKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPKSPYSHMAAASLAETVACLVRVPTENVKQKMQAGLHSTAAETVSAILKNGGLGGFYTGYLTTVVREIPFSFIQFPIYERLKVTWAERRGGPLEPYEAAGCGAVSGSFAAAVTTPMDVVKTRLMLGADKHGTTYRGLGNTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTQLMGL 846
            MSE+ PSF  +L AGG AGT+VDVAL+P+DT+KTR+QSP+GF KAGG +GVYNG+ AAA GSAPGAALFFS+YE  K     ++   +MA++S  E  AC +RVPTENVKQKMQAG++ +    +  I +  G  GFY GY   V+REIPFSFIQFP+YE LK  W+E +G  + P ++A CG++ G F+AA TTP DVVKTRLMLG D+ GT Y G+ N   R+Y E G     +G+ PR  WIG+GG VFFG YE  K  L+ +
Sbjct:    1 MSEKDPSFRVALVAGGCAGTSVDVALFPIDTLKTRMQSPQGFYKAGGFKGVYNGMFAAAAGSAPGAALFFSTYETVKVPDSIQNESCYMASSSCGEVAACWIRVPTENVKQKMQAGMYPSTRIAIKGIFEQRGYRGFYVGYFACVLREIPFSFIQFPVYETLKKRWSEWQGRDVTPIQSALCGSIGGGFSAATTTPFDVVKTRLMLGRDREGTQYNGMLNAIFRIYAEGGVKKFFTGIVPRTVWIGLGGCVFFGSYESVKELLLDM 266
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.53.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFT9_ECTSI3.320e-15790.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YJ97_9STRA5.570e-11066.54Mitochondrial carrier domain-containing protein n=... [more]
A0A7S2Y3T2_9STRA2.540e-9964.18Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1UH46_9STRA3.860e-9763.08Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A1V9ZD58_9STRA2.110e-9559.93S-adenosylmethionine mitochondrial carrier protein... [more]
A0A024U5F9_9STRA3.490e-9360.46Uncharacterized protein n=9 Tax=Aphanomyces TaxID=... [more]
A0A067C9P7_SAPPC9.570e-9360.08Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A6G0XXM9_9STRA1.120e-9060.08Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W7TQP7_9STRA6.000e-8960.39S-adenosylmethionine mitochondrial carrier protein... [more]
L1IQF6_GUITC1.700e-8855.64Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig125contigP-littoralis_Contig125:231703..243617 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LFT9
Preferred nameSLC25A26
PFAMsMito_carr
Model size2757
Max annot lvl2759|Eukaryota
KEGG koko:K15111
KEGG TC2.A.29.18
Hectar predicted targeting categoryother localisation
GOsGO:0000095,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006839,GO:0006855,GO:0008150,GO:0015238,GO:0015805,GO:0015893,GO:0016020,GO:0016021,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051179,GO:0051181,GO:0051182,GO:0051184,GO:0051185,GO:0051234,GO:0055085,GO:0071702,GO:0072348,GO:1901682,GO:1901962
Exons7
Evalue3.42e-167
EggNOG OGsKOG0768@1|root,KOG0768@2759|Eukaryota
Ec32 ortholog descriptionMitochondrial carrier protein
Ec32 orthologEc-01_000960.1
DescriptionS-adenosyl-L-methionine transmembrane transport
Cds size810
COG categoryU
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig125.53.1prot_P-littoralis_Contig125.53.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig125 233605..243572 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789547.5208406-UTR-P-littoralis_Contig125:231702..2336041680789547.5208406-UTR-P-littoralis_Contig125:231702..233604Pylaiella littoralis U1_48UTRP-littoralis_Contig125 231703..233604 -
1680789547.601717-UTR-P-littoralis_Contig125:243572..2436171680789547.601717-UTR-P-littoralis_Contig125:243572..243617Pylaiella littoralis U1_48UTRP-littoralis_Contig125 243573..243617 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789547.5324378-CDS-P-littoralis_Contig125:233604..2336881680789547.5324378-CDS-P-littoralis_Contig125:233604..233688Pylaiella littoralis U1_48CDSP-littoralis_Contig125 233605..233688 -
1680789547.543534-CDS-P-littoralis_Contig125:235358..2354571680789547.543534-CDS-P-littoralis_Contig125:235358..235457Pylaiella littoralis U1_48CDSP-littoralis_Contig125 235359..235457 -
1680789547.553033-CDS-P-littoralis_Contig125:235972..2361071680789547.553033-CDS-P-littoralis_Contig125:235972..236107Pylaiella littoralis U1_48CDSP-littoralis_Contig125 235973..236107 -
1680789547.5621967-CDS-P-littoralis_Contig125:236482..2366801680789547.5621967-CDS-P-littoralis_Contig125:236482..236680Pylaiella littoralis U1_48CDSP-littoralis_Contig125 236483..236680 -
1680789547.5725555-CDS-P-littoralis_Contig125:237768..2378631680789547.5725555-CDS-P-littoralis_Contig125:237768..237863Pylaiella littoralis U1_48CDSP-littoralis_Contig125 237769..237863 -
1680789547.5816236-CDS-P-littoralis_Contig125:238207..2383641680789547.5816236-CDS-P-littoralis_Contig125:238207..238364Pylaiella littoralis U1_48CDSP-littoralis_Contig125 238208..238364 -
1680789547.5895758-CDS-P-littoralis_Contig125:243530..2435721680789547.5895758-CDS-P-littoralis_Contig125:243530..243572Pylaiella littoralis U1_48CDSP-littoralis_Contig125 243531..243572 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig125.53.1

>prot_P-littoralis_Contig125.53.1 ID=prot_P-littoralis_Contig125.53.1|Name=mRNA_P-littoralis_Contig125.53.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=270bp
MVMSEQPSFLSSLAAGGMAGTAVDVALYPLDTIKTRLQSPEGFVKAGGLR
GVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPKSPYSHMAAASLAETVA
CLVRVPTENVKQKMQAGLHSTAAETVSAILKNGGLGGFYTGYLTTVVREI
PFSFIQFPIYERLKVTWAERRGGPLEPYEAAGCGAVSGSFAAAVTTPMDV
VKTRLMLGADKHGTTYRGLGNTFRRVYTEEGAAALMSGVTPRVTWIGIGG
FVFFGVYEGAKTQLMGLGL*
back to top

mRNA from alignment at P-littoralis_Contig125:231703..243617-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig125.53.1 ID=mRNA_P-littoralis_Contig125.53.1|Name=mRNA_P-littoralis_Contig125.53.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11915bp|location=Sequence derived from alignment at P-littoralis_Contig125:231703..243617- (Pylaiella littoralis U1_48)
AGAACACCAGCCAGTGGCGCGCCGTGCCACTACAACTTCAGTGTCATGGT
CATGTCTGAACAACCCTCATTCCTGTCGAGCCTCGCGGTGAGTGAGCTCC
CTTGCTCCTGTGTGGCTAGTTTGAGACAAGCCAGCACTGTAAAGAAAAAA
AACACAAATGCGTGCGGCGTAACGTCCTAATCTGTTGTTCGAATTTAACC
GCAGCCGCACAGCAATTTGTTCTGGTTTGAATAGCGGAGACTGCGGCATC
CGGCTGTCCAAATGGAGAGATGTGTGGTGTGTGTGTGTGCGTGTGTGTGT
GCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
ATGTGTGATTATGTGCGTGCGTGCGTGCGTACGTGCGTGCGATGCGTGTA
GGGAAACCTATCTAGCCATATAAGTCGGGACCTCTGTTGCCGTCAATCCT
CTCTAGAGCTGGTCGGCACGATATGATGTTCGCCATCAAACCTGCTGTGT
GTCAAATGCTCTCCCAAAGATTCAAGACTAACCCATCTGGGACTCAGGGT
GGCTCTTGTCAGGGTGGCTCTTGTCAAAGCGTTTTGGGCCCATTCAAAAA
TCAAAAATCAAAAATCAAAAATCAAACTCGGAACGTGTCACTGATAGGTC
AACAATTCATCCGCCCGCACCACGTTTTGGATTTCAGTTTTATTCTTCCG
AAACGGGAAGGAAAGGAAGGGTGGCTCTTGTCCCCGCGGAATGCCCAAAT
CTAAAATCTAAAATCTAAAATCAAAATTGGATTTCGATTTTAGAAATGGG
GTTGGGTCCACGCAGCTGCAGCTGCGTTCATCTAAAATTTAAAAAGCGGA
AGCACAACAAAAAAAATTAAAAGGAAGAGGAACGACCAGCAAGTCAGAGG
ACAGACGGTTGTGGAATGCATGCAGTGACGATTGGTAAGCTAGTGCGGGA
GCTACCATGCCTCCAACGCAGTGCACGATAGTACCCTTCATCGGCCTGAC
TCAGGCGCGTTGGTTGTCCTTAGTTTGAGATCGATAACCAAAAAAACTAT
GAAGAAATGTGTGTTTGATTGCGTGTTGCTCACCAGCATACCCTACGTAC
CCCTTTTCAGAGAGGCAACGAAGCCCACGCATTCAGCCGTTGTTGTACAT
ATTCTCTGCAGAGTGACACCAGCTATGTTACTCGGATGAGCTTGTCAGCA
TCTCGGCAGACTCCCCTCAGACAGAGTTCCCTTCTTTGCAGTTGGCATTA
CCATCTTCGTGTGGGGGTACCGTTTGTGTACAACAGGCAGCTACAAGAAG
TTGTGTTGTGAGTAAAGCATACCGGTGTTGATATCGAAATGCACAGCAGC
ACCACGTATTTATATACTAGTATGAGAGTCGTGAGCAACAACATCAGTCG
CTGCTGTCTGCACACTTCTGCACACTTGAGTGGTGCTTTCCGAAATATTA
TCGGAATCCGCTGAAACAAAGTGAACTGTATTATACAGGACACCAGCCTT
CTGCCGAGGTCACATATACGTACAACAGGGGGATACAGGTTGAGCTGTGA
CCAACTAAACAAAGACACATCGACGTGCACCGATGTGCTCCCACAAAGCA
CAGTGAACACCTCTCTGCTCGTGTTCTAGGTCTATTTGATTTTTGAGCCG
CTTTTTAGATTATGAACTCGGATTTTTTCGATTTTACCCTTCCTTTTATC
TTTCGGAATAATGAAGGCGAAATCGTAAATCTGCTGGATGCGTCGCATGT
GCGGAGGGAATTTTGGCCAACCAGCAGTTTTTTAGATTTCGATTTTCGAT
TTCGATTGGGTTTTTTCCGGGGACTAGAGCCACCCTAAAAAACACTTTCC
TTCCCGCCAATAGATTAAAAACGCGGCTCAAAAACGAATAGACCTAGAAT
ATGAGACAGAGAGGTGTTTGCTGTGCATTCCGGGACCACATGGTGTACAC
TGCATATGCACACATGTGCTAGCTCCGGAGAAAGCTGGTATCACGCAGAA
TACAGATCACTTTGTTTGAGCGAATTCCGACCAGAATCCGGAGAGCAGCA
CTCTAGTGTGTAGAAGTGTGCAGGAAGTTTGTTGCTCAACTGCTGTTTGC
GTAGCTGACACAGCCGCTACGTCCAAAAAAGGGCAGATGTGCAACACGTA
CTTACTCATCTCTTGCCGAGTTTTTCGGTTATCGATCCTAAACAAAGAAC
TACCAACGCGCCTGAGTCAGGGCGATGTGGGGCACCATCGTGCTCTTCGT
TTGAGGCACGACAGCTCCCGCACTTGTCTTGGAATCGAGACACGGCATGC
TCCTATCACACACCACCTGTCTGTGACCCCTGTTTTTTTTTTATTTTATC
CGCTCTTGATTTTGGACAAACGCAAGCTGCAGCAGATCGGACCCAACACG
AAATCAAAATCAAAATCCAATTTTGTTTTTGATTTTGAATACGGTCAACG
ATTTGACAAGAGCCACCCTCACTGCTCACGAAGGTGGCTAGTCGAGGAGT
GTGTTTTTTTTTTTTGTCGGGCAAAAGGGTTCCGTTTCGTGCAATCTCGC
CGCGCATTGCCTCCAAAAAATAACAAGAGCTCCTGCAAATCGCCTCGAGA
ATTGCAGCAGCACAGCAGCCATGGCACGAGCTAAAAATACGCAGGAGCCA
CGGCAAAGGCCCGCGATAAGCTCGATGGGTTAGGTTACATAGTAGAAGGA
TAGCCCGGCCGCTATCACGAGCCGACAGAGAGGTAGCATGCTGGCTCCCT
GGTTCCGGTGTGTCTATTTCAAGTATCATTCAATTGCCCGGAAACAATGC
CCGATTTTTCCCGGCGGTTGAAGGTTTTCCTGTATCTGTAATTCTCTAAT
CCCCTGGGTGTGGAAGCCTTCGGCCTCTCTAGGGCACCCATTATTGCTAC
TGTTGCTGCTGCTGCTGCTGCCTGGTGAAGGCTCTCGTAGAGAACGCAAC
CATGTGTGTCGTTCCCGCGGTTGACGCTACCGCCTACACGGAGGGCGGCA
CAACCGCCTGCTACAACCAGTTCGTCTCGTTCATCAAAGAAAGCCTTGCC
AGGTGGAGAAGCCAATACATGCTATTTCCCGAAAGTGCGGCGCATTCACA
GACAGACGTGTTCATGATTCCAGAATCCAAGTAGACCGGGCTGGAACAAA
AAAAAAAAAATGCCCGATTCTGAAGCCCGATTTTTCCCTCTGAAGGCCCA
AAAGGGTTAAGATTCCCTTCCGGAGCTATCATCATACCAGTGACAAGGTA
CTACGAAGTACAGCAGCGCATTCCCCTCTGTCAGCAGCAGCAGTTGGTTT
TAGGTTGTACCACTCACTTTGGAGTACAATACATAAGGTGGTGTGGTCAC
GTGGTGAGTAGGTGGAAAAATGAGACAGGACATGAGGAGAGAGGAACATT
GTATCATACACAGCCAGAGTCAGGGGGTGCAACACTTACAGTAAGAGGCA
TGACAGTGAGTTCTTGGAGGAGATAAGAGTGCAGCGGTGCGGAAAAGAAA
AAAGCAGTACGGCAGCAGCATGACGTTTACCGTAGGTCGCATAAGACATA
CCAGGTAGATATTAAACTCGTAAGATGCCACCACCCCCTCCGAAAAGTAA
AAAAAGAACAAGAAAACCACACTGCTCTGAGCGCATAACTGAAAAATGTA
CTGCTTTGTACAAGTACGAAGTACAGAGCATTTGTTCCTCTCCTCCATCA
AACCATGCCTCCTGCACGAAATCTTAAGGGGGGGCCGGTCAACCTCACAA
AATACAGAAATCGACGTTCCCGTGTGCATCAAGCCGGAGTCACGAATGGC
ATCAGTAGAATACATCATGTAGAGGCGACGTGCGTGGTGGCACACTCAGA
GCTCCTGCTGGGACTGTGATATCGATGGTCGTAGATATGTGATGCAGCAG
TTCAAAAACCGTCCGCATCTCAGCCCGAAACCAAACATCGTACTTCATCT
TCCACTGTTATCATGCACTCGCCGCTATGGGCTTCAGTCTCCTGAACTGA
GCGTTGTCCGAGGCAGCAGGTGGTATGAGCTACTTCTGTAGACCCGAAGT
TCCGGAGATTGGGGCCCATGGCAATGAGTACAGCAGTGGAAGATCGTGCA
AGATGTGTGATCTCCGGCCGAGATGCGGACAGAATCTCGACTGCTGCACA
GCAGTACAACATATCTTCAACCACCGATAGCACAGCCCCAGCAGAAGATC
TGAGCTAGCCAACACACAATTCGCTTCTACGTGATGTCCCCTACTTATAT
CATTCGTAACCCCGGCCTCATTCGCACCACACGTCTTATTCGGGGGTCTC
TATTGCTCACTGTTTCGTCTTAGGTTTAAAGAAGGGGATATTTTCATCTT
GGATTTAGAGTTTGCGAAATTAATACGGAGTTCTGAATCACAACATTGTC
GTCGCGATAACGCCCAAACCACCACCTTCCAGCCGTTGGTACGGCCCCCA
ACCCTGTTCTACTGGTCTGATTGCCCCTTCCGTGACGTTTTGGGGGCTCT
TTACAGAATTCCAAAATTGAGCAAAATTGGAAAAGGTTGACTGGCACCCC
CGAACCTTCCGTATCGTCCTTAATATTCCATATCGTACTCTCAAACTTAA
ACACCCGATTCGTCTTTTGGCAGCGCTACTATTACGCCCAGCTTAGATGC
AGAAGTTTTGAGCCTCCGCCTTCTTTTTCCAAGGCCGCACACGGCACTAT
CCGAAGGTAGGCTGAGAGTGCTGATGTCCAGTAGTAATATAATAGGAAGG
CAACGACAATCCGTCCCGAGAGAAAAGACTGCTGTGTCCTCTGTCGTATG
ATATAATAAATAAACATGCATTATTTTGTTGTCGCGAAGCTGCTGCTGCT
GATGCTGATGCTGTTGTGTTTACAGCAGTGGTGTCTGGTGCAGCACGAAC
ATATACTGAAGTATACAGCAGCAGTACCGGTATCATGTTCGGCATATGGG
AATCACATCAGAGTAAAAACACAATTCCTGATTTGGTGTTCCACGTTTTT
TGACAGCAAACCGACGTATCATGTTACGCAGCAGTATCACATGCACAAGT
TCGTTTGTCTCTTTTTCCAGCCATAAAAAAAAAACACCCCCAACCAAAAT
CAGGGGGGGGTCAAAATACTCAAACAGACATTGAACATTACCATCATACA
TACGTACACGCGTCAGAACCACAGGCAGCAAGCAGCATGCGTCATCGCGC
ACGCCCCCCCGTCCGTCCGTCCGTCCGTCCGTCCGAACCGCGCGCGCACA
CAGGCCGGCGGGATGGCCGGCACGGCCGTGGACGTGGCCCTGTACCCGCT
GGACACGATCAAGACCAGACTGCAGTCCCCCGAGGGCTTCGTCAAGGCGG
GTGGTCTTCGAGGGGTGTACAACGGGCTCAGCGCCGCCGCGGTGGGCTCT
GCTCCCGGAGGTGAGGGGGGTGTGTGCCTGCGTACCGGAACCAGCACGCC
TATTACTCGGAGAAAGGGGTTCCCCTTGTTGTTGCTTTCTTTCGTGGACT
AGGGGGGGGGGGGGCGGGGAAGGAGTCCTCGCGTCTCTTTTGTTCGCACG
TCCTGAACTTTTACGTGCATACATGTGTACGAAGTATATGTGTAGCATAC
CCCCCAACGCAACCTTGGACAGACAGACAGACAAACAAGTAGACGGTCAC
CATACTTTCCGTTCGCTGTATACTTGGTATATTATTGTGTGTGTGTGTGT
GTGTGTGTTTTTTTTTTGTCAACGTCTCCCCCCTCCCCATCCCGCCTCCC
TCAGCGGCCCTCTTCTTCAGCTCGTACGAGGCCGCCAAGCACGCCCTGGA
TCCCAAGTCTCCGTACTCACACATGGCAGCAGCCTCGTTGGCCGAAACGG
TTCGTGATGCGAAAGTATATACTAAAAAGAGGTATTTTTTTTTTGTCTGC
TTTTTGTGAGAAACGAGGACCGGGCTCAAAGGCTGCTGTTTTTCTTGTCT
TTATCCCATCGGTTTTCTGGTTGCTTGGCGTGAGAGATCAGGCTCACTTG
TCTTGCCGGAAAAACAGGGTCCACACGGATGACATTGGGTACCCCCCCCC
CCCGGCCACGCTTGACTTCTGCTGCGCACAGCACGGTCCGACTGCGCGGT
GTTGATCGAAACTCGATACTTGTACGCACACCTTCCTTCAGCACGAAAGA
ACGTGTCTAAATGGCGGCAAGCGGGTCACTTTGATACACCCTACTCTTCG
GGAGCTGCCCGGAATCGTGTCTTGTTGCTGTCGGTAAAATAATGGCTGGG
CTGGGAGGGGTCCGGTTGCGCATCTCCGGCGATGTGCTGGCACTGGCGGT
GCTTTGCTTGTCGCGGATCATTCGAGCTTTTGTATTTTCGATCGGCCCTG
AGTGGGGAGAGGGGAGGGGGGGGGGTGATCTGGGGGGTGAAACAAAACAC
ACCGCCGCGTGATTCACGGGGGGCCGGCACGATATGCGTTGCTTTTAGTG
TTCCGCTCTGAAGTTCATAAACGACGGGATGTAGCAGGTACGAGTATATC
TTTGTACGGTGGGCGAGCACGCCCATCTACCGACCACTCCCTACCACGGT
GATGCACCTCGCTTGGTGGAACTCTCAAAAACGAGTCCACCGATGGATGG
ACGGGGGGTTGGCAAAATCAACAAATAATAGCGAAAAAAAACCAGGTCGA
AGGGTTTCTCCCCGAGTTGGCGTTTTGCTTGACCCGGCAGAGCTGTGCCT
GTGTATCACAACCTCTCTGTGTAGGTGTTTCCATTCCCGGCCGACATACC
ATACTAAGATGGATCCTCTCTCTCAAGAGCTGGGCGCATGCATACTGCTG
CCGTAAACATCCCACGGAGTTTTCCTTTCAGGTATGTACAAGTATCACAG
GTGTTCTCTCTCTCTCTCTTTCTTTCCTTCTTTCGTATTTTTTATTGTTC
TGGTTTCTGATTTTTCTCAAAAAATAAAAATAAACAGGTGGCGTGCCTCG
TTCGCGTCCCGACGGAAAACGTGAAGCAGAAGATGCAGGCCGGTCTGCAC
AGCACCGCGGCGGAGACGGTGAGCGCCATCCTGAAGAACGGCGGCTTGGG
GGGGTTTTACACGGGGTATCTGACAACGGTGGTGCGGGAAATACCTTTCT
CGTTCATCCAGTTCCCGATCTACGAGCGTCTTAAGGTGCGCGCCCAGTGT
GTGTGTGTGTGTGTGTGCGTGTGTTTGTTTGTTTGGGAGTCTTCGTGCCA
TTCAGTACAGCGCACAAATGCGATGGTTTGAGTTGTTTCGAATGTATTTA
TGTAGGTAAGTACATATCATACGTAATCACACGAAGCATATACTTGCAGC
ATCTTTTATGTTTGATATGATATATGTTCGTGATCGCGCGGCCATAGGTG
AGGTGGTTGGCATTGCCGCAGCATACTTGTGTGGGTGTTACTTCTTTTTT
TTTTCTGCTTGCGGTCGGTTGATGACCCAATAATCACATGTTCAGACTCG
ACAGGAGGGAAATAGTGTATAATGAAATGACGAGGTAACGACTTTTTTTT
TCTTCAACAGGTAACGTGGGCAGAGCGGAGAGGGGGGCCGCTGGAACCGT
ACGAGGCAGCTGGGTGTGGGGCGGTTTCGGGGTCTTTCGCGGCAGCAGTG
ACGACGCCTATGGACGTCGTCAAGACTAGACTAATGCTGGGAGCGGTGAG
TAAGCTGAAGAGTGCCACGCACGCCACTTTGTACTTGAGATGATACCAGG
TGGATACCGGTATCAGATGTACAGTACTTGCCGGGAGTCGAGGTCGGAAC
GGTTTTTGACCCACTTATTCCTAGGTAGCTGAATGTCGCCATTTTGGGTC
GCCATTTCGTTAATTCGTCACTTGGATTCTGAGGTGAAATCCCGATGGCT
TAGCTTCTACCTCGCTGCATGACCGCTCGTTTTTCGAAACGCATTCTATA
AACAAGTGAACGCGTGGCGAAGAGGAAAATGGCGAAGCGCGTTCACGTGC
TTTTATTTAGCCGTTTTTTTGAATAAAATGTATTCCATTTATTTTTTTTA
CAGGGGCGTAGTATGAGAGTTAACATAAAAGATACCAATACCAACAGCTA
CAACAACGACGAGGTCGACGACGACGACGCTGACGACGACGACGGACGGT
GTTACCCTCCTCTGCTGTACTTTTTTTTGTTGTTCTTGTGTTTTTCCCTC
CTGTGGGCAGGATAAGCACGGCACGACGTACCGAGGCTTGGGGAACACGT
TTCGACGAGTCTACACTGAGGAAGGGGCTGCGGCGCTGATGTCGGGGGTC
ACTCCGAGGGTGAGCACGGCGGTGCCCCCAAGTTGATGTTATTTTTTTAT
TTTGTAACCCTCCCTCCCTCCCTCCCCGCGCGTTTCTGCTGGAGGACTTG
ATTGACGGTACCCGGTGGATAGACGTTGTCTGGAATTTCGGTTATTTTGA
CGCGTCATACATGTATTTGTCGCGAAGCCATCGCTGCGATTCGTGATAGG
TGGTGGTGTTGAATACCGTAAACTACACAAGATAACACACCCACATAAGA
TACCACACCCCCCACAGAATACGACACCCTGGTGATAATTTTGGGCGCAT
TTTTGCAACCATCGATTTACCACCGGGGCTACACAAGATACCACACCCCC
GGTGATAATTTTAGTTACGCCGCATACATTCACGGGGCCCCTCCTTTTCT
ACCACCGGGGTGATAGAACATCTGCCCCGTGGGCACACAACACCACACCC
TGTGTGCGGGGGGAACACCCCGTGTGGAGACCTCCAAGAACATGATGAAC
GTTGAGGGAGGGCAGAATGCCTCTGGTGCCCCCGCTTCTCCGACAACTGC
TTCGACCGCAGCAGTACAGCAGGCGCCACAGATCACGTCGTTGTTTCAAC
TCGAGCGCACTTCTCCTACACAAGCGACTCCTGCCACGAGTCCTCCTGCT
GCTGTTTCCTCGCGTTTCTCTTCTGTCTGTTGTTTTCTTAGCCGCGTACA
GTGCAACGTTGTTGTGTTTCGTGGTCTTGGACTTTTGGTCGTGCTTGTTG
CAGCAGCCTGGTACGTTTTTGAAGAGGGCAGGACAGATGGCGTACTCTGT
GGCGCCGTCTCGCGTCATATCGGGCGAGGTATCTTCGATTTAATTTCCAC
TTTTTGATGCTCTATCAAGCCAAGAGAGCTGACATTTTTTTTTCGAGCTT
TCTCGGCTTTGAGGGGGGTCAGTCATCGTCGAGGTAATGTGCTCAGGAGT
TTTGTCCCCGCAATAACCTAACGTGTGTGCGGACGTTCGGACAGGTATCA
CCCCCCGCAACACCACACCGCTTCAAGTGTCCGGCAGCAGCGGCTCAACT
CTACAAGGAAGGAGTGTTTCGGTATCCCCCCCCAAGCACGACCTGTGGGT
GTTCGGAGGTTATCACACCCCCTGGTTTATCACACCCCCAAACACACCCT
GTGGGTGTTCGGACGTGCTATCACACCCCCTGGTTTATCACACCCCCACA
TTTATCACACCCCCCAACGTACCCTGTGGGTGGTCGGACGTGCTATCACA
CCCCCTGGTTTATCACACCCCCTGGGGGCCGCCGCGACCAGCACTCTATC
ACCGGGGCTACACAAGATACCACACCCCCCCACAATACCACACCCGGTGA
TAATATTTTCAAGCGCTCAAATGTATCACCGGGGATGTGTTATCTTGTGT
AGTTTACGGTAAGCAACAGCAACAGCACGTTATTCAAGACGCTGGTGGTT
GTGACTCGAATCTTGAATAACGCGCAATTGCTGTTGCTGTTGCTGTTGTT
GTCGTTGTTGTTGGCAATCTTGTTGTTGTGCTTTTCTAGCAACCCTTGGG
GCCGCAGCAGGCGACCCAAAACTGCTGTTGGGGCGAAAAAAACAAAAAAA
ACGCGCGTTTATTACCGTCTTAACGTTGTTGCCGTGCTCTTCTTACTTTC
TTTCCGTATTGGCGTCGGGTCCGCACCAGGTGACCTGGATAGGCATCGGT
GGCTTCGTCTTCTTCGGGGTCTACGAGGGCGCCAAGACGCAGCTGATGGG
TTTAGGACTCTGAATGAGCGTATCATACCAAGTCTTAGCTGCTGTATGCC
TGGTACGATGCAGCGGTACACATACTATTGTGTGATGTGACTAGGGTTGT
TGTGGTGAGGTGTGGTGTGTGGGAAAACTTTGCTGGAACATCCGATCGAT
GCTAAAACAGGTAAAACGGCAACTGGTACAGACAGCAGGGCGACGGGATA
TCATAGATACGGTTTCGAAGTACGCGTGTACCATGGTATGTAGCAAGAAA
TTTTCCGCCTCGTCTTTTCTCTCCTCACACGAAAATAAGAAGATCAAGAA
AAAGCTCTCCTTTGTGTTTTGACCTTTCGACCTGTGTGGTTGTGTGTGCG
TGTGTGTGTGTGACCCCCCCCATCGGCTGGTGATGCGCCCACACACACCT
TAAGGGTTAAGGTGTAGACTTACTGGCGTCCAGAATCGATGGGAGACAAA
ACACACACACACGGACAAAACACTTCCGCCTGGGGTAGCTAGCTGCTCGT
TAGCACGGGGCGGCCTTTCTTGTGTTTTTACAGTGGTGTCATCGTATGAT
ATCACGCCGCCTTTATTGTTTCTTTCGTGGCGGCGGCGGCAGCCCCCGGT
TGTTGGGGTGCGTGCATGGAATAGGGCGGAGTTCCGAAAGATCCGCCTAT
TGTGGTGGCCAATTTTTCGTCCGCTCACAGAGCGGCAACAGGATGTTTAG
GTGCAGGAAGGACCTTTGCAAAAGGGTATTTTGTGTTTTCGAAACACGAT
GTGATAAGTCTAGGTATTCTGGTATAAGGTCATGTACAGGGTCGGCGTGG
AAAATAATCCCGCGCGCAGCAGTTCTTAATGAAGCATCAGCTTCACTGCT
GCTGCTGCTGCTGCTGCTGCTGCTAAAGACCTGGTCGGGAAGCGACGCGC
GGGGGCTTTGAAAGGGATATGTACCGTATTTTTTGTTTTCCTGCCGTTGC
AAAAAAGGTACAGCAGACAGCATGACGACGAATTGAAGGTACAGCAGGCA
GAGAGGGTGTTTCGGCTCGTGATGTACATGATAGGTGTACCGTTTTTTTC
GCTACTTTTCCACCAAAAAGGGTACATGTAGAAGAGGTGGAAGGTACCGA
GAATAGCAGGTGTCGGAAAAAAAAAATTAAGCCAAATAAGATCCTCGCGG
TGGTATGGGATTTGTAGCGGATCTTTTGTACTACATCAGCTGGGATCGAT
CGCAGAGTTTGTGATCTGGCCGTATGGCTTAAAAAAACAGCAGCAGCAGC
AGCAGCAGCAGCAGGGCGACATTTTTGCAGTGTGTTTTTGTTGCCCTTGA
TATGTTCCGACGGACGCCTCTTGTTTAGTCGTTGCTGTCCGACTACATAC
AGCAGTGCGGCACGTATTTAGCTTCATGGTGACGTGCATGGCGATCGATG
GTCGCGAGTTTTGCAGCTTTCTTTGGTGTTGACGGCGGCGTTGGAAGATA
TATTATTATATCATATATAGCTGAAAACGCGATGATGACGTCCATTCGTC
GGTAGTGTGAAACTTGCAACGTGCCCACTGCACGCAGTGGTGGTGTTGCA
GAGGAAACTGCTGCTGTCTGCGCCGCAAGGAAAACGACTGTCCCGTCCGC
CCCCCTTCCTCTTGACTGCAGTGTTCTTCAAGATAGATACCCAGGCGAGT
ATGTCGGTACGTGTCGTGGTGGGTGATCCCTCTTTTTCAATAGCGTTTTT
CTTTTTTTTCTTTATCTTTTCTATGCTGAAAATATTGGGTCATCGCGCGT
GTGTATCATGCGCGAATAAGATGCAACGAAGTTCACGTATTTTCAGGTTT
TCGTACCCACTCCTGTGGGTGCCCAATGTGGGGTCGGTATTTTTTTACTC
CGTATTATTTTAGAAAAATAGAAGTGCCTATAACACGATATTGTATTATC
ATACCGTTATATTTC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig125:231703..243617-

>mRNA_P-littoralis_Contig125.53.1 ID=mRNA_P-littoralis_Contig125.53.1|Name=mRNA_P-littoralis_Contig125.53.1|organism=Pylaiella littoralis U1_48|type=CDS|length=810bp|location=Sequence derived from alignment at P-littoralis_Contig125:231703..243617- (Pylaiella littoralis U1_48)
ATGGTCATGTCTGAACAACCCTCATTCCTGTCGAGCCTCGCGGCCGGCGG
GATGGCCGGCACGGCCGTGGACGTGGCCCTGTACCCGCTGGACACGATCA
AGACCAGACTGCAGTCCCCCGAGGGCTTCGTCAAGGCGGGTGGTCTTCGA
GGGGTGTACAACGGGCTCAGCGCCGCCGCGGTGGGCTCTGCTCCCGGAGC
GGCCCTCTTCTTCAGCTCGTACGAGGCCGCCAAGCACGCCCTGGATCCCA
AGTCTCCGTACTCACACATGGCAGCAGCCTCGTTGGCCGAAACGGTGGCG
TGCCTCGTTCGCGTCCCGACGGAAAACGTGAAGCAGAAGATGCAGGCCGG
TCTGCACAGCACCGCGGCGGAGACGGTGAGCGCCATCCTGAAGAACGGCG
GCTTGGGGGGGTTTTACACGGGGTATCTGACAACGGTGGTGCGGGAAATA
CCTTTCTCGTTCATCCAGTTCCCGATCTACGAGCGTCTTAAGGTAACGTG
GGCAGAGCGGAGAGGGGGGCCGCTGGAACCGTACGAGGCAGCTGGGTGTG
GGGCGGTTTCGGGGTCTTTCGCGGCAGCAGTGACGACGCCTATGGACGTC
GTCAAGACTAGACTAATGCTGGGAGCGGATAAGCACGGCACGACGTACCG
AGGCTTGGGGAACACGTTTCGACGAGTCTACACTGAGGAAGGGGCTGCGG
CGCTGATGTCGGGGGTCACTCCGAGGGTGACCTGGATAGGCATCGGTGGC
TTCGTCTTCTTCGGGGTCTACGAGGGCGCCAAGACGCAGCTGATGGGTTT
AGGACTCTGA
back to top