mRNA_P-littoralis_Contig125.35.11 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig125.35.11 vs. uniprot
Match: D8LCZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ3_ECTSI) HSP 1 Score: 1696 bits (4393), Expect = 0.000e+0 Identity = 999/1367 (73.08%), Postives = 1059/1367 (77.47%), Query Frame = 2
Query: 602 KGNNQSTGGKPMNVNDMSPDRREAHLAVKAAQKHAQRLEDPEPEKLEVPQDMLTEVHEAARAVNRHFRXXXXXXXXSSGSTPNENDAPQGRRREVWGGNSXXXXXXXXXXXKGAAYDDIQSTRRKLPAYARQEEILDVINNNQVVVISGETGCGKTTQGGSG-----RRGKKRKGFRCESGGILWWGPSPSAEAASVPQFLMDQYRRDGVG-----ESATEKPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLERRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSNYFSNAPKLNIPGYTFPVEEFYLEDALELTRTRITPTVNRQGRVKRKPLGPAEYQQKASAAAERERGRGRDLPPGRYSQRTLESLAMFDESEVPLDVIVDLVQYVHAYEGDGAILIFLSGWEEISAVHDRLEMLPQARAWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVAEMSEYQLPEIVRTSLESLCLQVRHLGLASPGRRGVAGFINKALTPPGVVALNNALTLLTRIGAFRTDESLTPLGKHLALLPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMSKKEQADAAKRRFAQGEPSDHLCLYNAYEAWRACPRRDQQDFCHVNFLSPSALRTASEVRGQFQTLLRDAGLIPRDRDQLAELNRHSEMPKFWPVVRAAMCSGLYPNLVRVDYGKKKFKLLSADHSTLNPHPSSVTSEGNPFNRRWAYYHEMCRTPGGLFIYDLTEASALPLLLFGAGDPRAGRAPGALMSKLVTGAHIPGGAKKKKGKKKGHV--PSVGPFAGVEPWVYFDVGNS-RGVLEEIRAALEYVITEHVGGARSSERETRLIDTVAQALVGEEELANPSKPGGGHDRTQHPHGTMRAYNVDADDDYEFHRNVQGGGEYRGSGPGAFRGYGDNGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXSVAHAGRPRAGQYSAXXXXXXXVRAQNGSG----------YMQQHMGGDRDRDRGGSSS------HFRKSSPPGGEKPPEV----GDARYAAAEAAVAAALGHASIS----GSSAMPASAHASAGFGIFSHYGGXXXXXXXXGMARAPRGXXXXXXXPGGGPPRYNPPNGXXXXXXXXXXXXXXRGDQGGASQPRSLARPGGVASHEFNRGXXXXXXXXXXXXAAHSPVSTVLGGAYHNYAVPPGSMPLGXXXXXXXXXXXXXXXXXHYVSRVVHTTRGEDSRDRDGHGGRGGKRGRW 4591
+G + GK MNVNDM+P+ REAHLA KAAQKHAQRL DPEPEKLEVP+ ML EV+ AA+ V H + GS +E D P+ RRREVWGGN KGAAY+DIQ++RRKLPAYARQ++IL+ INNNQVVVISGETGCGKTT GG RG G +G +LWW VPQFLMDQYR DG G + KPYNIVCTQPRRISAIGVAERVAAERGE VGGTVGYQIRLERRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDL LQRKDLTLVLMSATLNADLFSNYFS APKLNIPGYTFPVEE+YLEDALELTRT+ITPTVNRQGRVKRKPL ++ QK S + GRYSQRTL+S+AMFDESEVPLDVIVDLV++VHAYEG+GAILIFLSGWEEISAVHD+LE LP+ARAWRLYALHSQMPTSQQRDVFLRPPRG RKIVIATNIAESSITIDDVV+VIDGGKHKEKSYDPEAKVQSLLPAWVSQASS+QRRGRAGRVQPGRCWH+YPRSKV+EM+EYQLPEIVRTSLESLCLQVRHLGLA+ G+ GVAGFINKALTPPGVVAL+NALTLLTRIGAFRT+ESLTPLGKHLALLPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMSKKE+AD AKRRFAQGEPSDHLCLYNAYEAWR CPRRDQQ+FCHVNFLSPSALRTAS+VRGQFQTLLRDAGLIPRDR+QLAELNRHSEMPK+WPVVRAAMCSGLYPNLVRVDYGKKKFKLLSADHSTLNPHPSSVTSEGNPFNRRWAYYHEMCRTPGGLFIYDLTEA+ LPLLLFGAG GR PG L+ KLVTG HI GG KKKKGKKKG+ PSVGPFAGVEPWVYFDVG R LE+IR+ALEYV+ EHVGGARSSERETRLI+TVAQA VGEEELANP KPGGGHDR+QH HGTM+AYNVDADD EY XXXXXXXXXXXXXXXX S H G R XXXXXXX Y GGDR D G S H+ KSSPP EKPP GD RYAA +AA LGH+S S GSS+M SAHA FG XXXXXXXX XXXXX GGGP RYNP NG XXXXXXXXXX D G SQPRSLARPGGVASHEF RG + HSPVSTVLGG YHNYAVPPGS PLG XX HYVSR V +RGEDSRDRDGHGGRGGKRGRW
Sbjct: 17 EGKGNQSKGKAMNVNDMTPEDREAHLAHKAAQKHAQRLADPEPEKLEVPEQMLKEVYAAAQDV-LHAKNDLR----GRGSV-DEKDGPRARRREVWGGNGSGVSIPPPPSHKGAAYEDIQTSRRKLPAYARQQDILEAINNNQVVVISGETGCGKTTTGGQQVTLVTHRGSSY-GAAVTAGSMLWW--------HQVPQFLMDQYRYDGDGGDGGXDGGASKPYNIVCTQPRRISAIGVAERVAAERGEAVGGTVGYQIRLERRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLVLQRKDLTLVLMSATLNADLFSNYFSQAPKLNIPGYTFPVEEYYLEDALELTRTQITPTVNRQGRVKRKPLDREQFGQKMSKL---------EHLRGRYSQRTLQSMAMFDESEVPLDVIVDLVRHVHAYEGEGAILIFLSGWEEISAVHDKLEALPEARAWRLYALHSQMPTSQQRDVFLRPPRGVRKIVIATNIAESSITIDDVVYVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSKQRRGRAGRVQPGRCWHVYPRSKVSEMNEYQLPEIVRTSLESLCLQVRHLGLAAGGKGGVAGFINKALTPPGVVALDNALTLLTRIGAFRTNESLTPLGKHLALLPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMSKKEEADQAKRRFAQGEPSDHLCLYNAYEAWRMCPRRDQQEFCHVNFLSPSALRTASDVRGQFQTLLRDAGLIPRDREQLAELNRHSEMPKYWPVVRAAMCSGLYPNLVRVDYGKKKFKLLSADHSTLNPHPSSVTSEGNPFNRRWAYYHEMCRTPGGLFIYDLTEAAPLPLLLFGAGQRDPGR-PGQLIHKLVTGPHIQGGGKKKKGKKKGYQAPPSVGPFAGVEPWVYFDVGRDVRRPLEDIRSALEYVVGEHVGGARSSERETRLINTVAQAFVGEEELANPPKPGGGHDRSQHHHGTMKAYNVDADDXXXXXXXXXXXXEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGYGSSSAIGSGGHGGYSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPPYGSSSGGGDRSGDHRGDSGRXXXXGHYGKSSPPLSEKPPSHSMAGGDVRYAAPQAAPK--LGHSSSSMSGGGSSSMSGSAHAGGSFGXXXXXXXXXXXXXXXXXXXX-----XXXXXXGGGPARYNPSNGESSGXXXXXXXXXX--DPGSVSQPRSLARPGGVASHEFTRGPMRP--------STHSPVSTVLGGEYHNYAVPPGSAPLGGGSGXXEGGAGHPQH--HYVSRSVPMSRGEDSRDRDGHGGRGGKRGRW 1339
BLAST of mRNA_P-littoralis_Contig125.35.11 vs. uniprot
Match: A0A2R5GQJ2_9STRA (ATP-dependent RNA helicase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQJ2_9STRA) HSP 1 Score: 651 bits (1680), Expect = 2.680e-209 Identity = 414/986 (41.99%), Postives = 557/986 (56.49%), Query Frame = 2
Query: 710 RLEDPEPEKLEVPQDMLTEVHEAARAVNRHFRXXXXXXXXSSGSTPNENDAPQGRRREVW----------GGNSXXXXXXXXXXXKGAA--YDDIQSTRRKLPAYARQEEILDVINNNQVVVISGETGCGKTTQGGSGRRGKKRKGFRCESGGILWWGPSPSAEAASVPQFLMDQYRRDGVGESATEKPYNIVCTQPRRISAIGVAERVAAERGETVG-GTVGYQIRLERRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSNYFSNA-----PKLNIPGYTFPVEEFYLEDALELTRTRITPTVNRQGR----------------VKRKPLGPAEYQQKASAAAERERGRGRDLPPGRYSQRTLES-LAMFDESEVPLDVIVDLVQYVHAY----EGDG-AILIFLSGWEEISAVHDRLEMLPQAR-AWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVAE-MSEYQLPEIVRTSLESLCLQVRHLGLASPGRRGVAGFINKALTPPGVVALNNALTLLTRIGAF-RTDESLTPLGKHLALLPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMSKKEQADAAKRRFAQGEPSDHLCLYNAYEAWRACPR-RDQQDFCHVNFLSPSALRTASEVRGQFQTLLRDAGLIPRDRDQLAELNRHSEMPKFWPVVRAAMCSGLYPNLVRVDYGKKKFKLLSADHSTLNPHPSSVTS--EGNPFNRRWAYYHEMCRTPGGLFIYDLTEASALPLLLFGAG---DPRAGRAPGALMSKLVTGAHIPGGAKKKKGKKKGHVPSVGPFAGVEPWVYFDVGNSR--GVLEEIRAALEYVITEHVGGARSS-ERETRLIDTVAQALVGEEELA 3511
RL D EPE L +P E+ EA A+ R S E P G R G +S + AA + + + R+ LP Y ++EI++ + +Q+ VISG TGCGKTTQ VPQFL+D + G + NIVCTQPRRISAIGV+ERVA ERGE VG G VGYQIRLERRA+EHT++LF TTG+LLRRLQ DP L+ VTH+ILDEVHER++DSDFLI+ILRDL +RKDL +VLMSATL+AD+F+ YF A P L+IPG TFPVE YLEDA+E T G ++ QQ+ A +R R G YS T+ + L F+E E+PL ++ L+ ++ E +G A+LIFL GWE+I +HD+LE L + W L+ LH M T+QQR +F PP G RK+++ATNIAESSITIDDV FVID KHKEK+YDP A + LLP WVS+AS+ QRRGRAGRV+ G+CWHL PR V + +E+ LPE+VRT LE LCLQVR L +A + G+ F+N+ALTPP +L NA+ LL RIGA R DE+LT LG+ LA LPV PQIGK+L++GC+LGCL+P+LT+ A+LSQR FV P+ KE AD AK FA G PSDH+ + NAY W + R +DF NFL+ + L A ++R Q+ TLLRDA L+ A R + W VV+A + +GLYP++ R+D +++ + T+ HP SV + +G + RW +H+ T GG+F+YD +E S LP+++FG D + G+ M VT + K ++K + ++ WVYF + ++ + R A++ V+ +G + + ID + +A E +A
Sbjct: 22 RLVDQEPESLILPPTCKRELSEAIAALKR--------------SAAEEEPLPSGPGRRAHKVQRTGQGFVGESSSSGIVSVEDLVRNAAKPHPGLAAFRQGLPVYQSRKEIVETVREHQITVISGATGCGKTTQ---------------------------------VPQFLLDDFWARG-------EHCNIVCTQPRRISAIGVSERVAKERGENVGTGKVGYQIRLERRANEHTRMLFCTTGLLLRRLQVDPSLDDVTHIILDEVHERSIDSDFLIVILRDLLARRKDLRVVLMSATLDADMFAKYFETAFESKVPVLHIPGRTFPVEALYLEDAVEATGCTDLSAEGSSGSRXXXXXXXXXXXXXXXXXXXXXXXSDLQQQQYVALKRSLERD-----GMYSSGTVRAVLENFNEEEIPLQLVGQLLTHIDEAHPMDESEGHAVLIFLPGWEDIRKLHDQLEFLNASHHRWALFPLHGAMGTAQQRGIFAPPPAGKRKVILATNIAESSITIDDVSFVIDSCKHKEKTYDPVANISCLLPTWVSRASALQRRGRAGRVRAGKCWHLVPRLHVEDNFAEHALPEMVRTPLEELCLQVRALEVAPKRKGGLLWFLNRALTPPAEQSLVNAIDLLNRIGALTREDEALTALGRCLATLPVGPQIGKSLIMGCVLGCLEPILTLTAILSQRTIFVAPLQSKEAADKAKAAFANGYPSDHMAMLNAYMQWEDAEKYRQGKDFAWRNFLNHNQLLMARDIREQYLTLLRDARLVSAGHGSNAIDARLNRNANEWAVVKACLLAGLYPHVGRLDIKRRRALIFIKGLPTVKAHPGSVNAKTQGAEWQHRWVAFHDKVMTAGGVFLYDTSEVSPLPIVMFGEAALEDEGVTKVDGSFM---VT-------VQNKTAQEKRIIK-------LQDWVYFGCEDPELPRLIADCRWAVDRVLQRAMGHQEKALPSQDAFIDALCRAFTANEAIA 931
BLAST of mRNA_P-littoralis_Contig125.35.11 vs. uniprot
Match: A0A7S2WNW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WNW9_9STRA) HSP 1 Score: 653 bits (1685), Expect = 5.570e-207 Identity = 371/772 (48.06%), Postives = 491/772 (63.60%), Query Frame = 2
Query: 953 DIQSTRRKLPAYARQEEILDVINNNQVVVISGETGCGKTTQGGSGRRGKKRKGFRCESGGILWWGPSPSAEAASVPQFLMDQYRRDGVGESATEKPYNIVCTQPRRISAIGVAERVAAERGETVG----GTVGYQIRLERRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSNYFSNA-----PKLNIPGYTFPVEEFYLEDALELTRTRITPTVNRQGRVKRKPLGPA----EYQQKASAAAERERGRGRDLPPGRYSQRTLESLA-MFDESEVPLDVIVDLVQYVH----AYEGDG-AILIFLSGWEEISAVHDRLEML-PQARAWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKV-AEMSEYQLPEIVRTSLESLCLQVRHLGLASPGRRGVAGFINKALTPPGVVALNNALTLLTRIGAFRTDESLTPLGKHLALLPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMSKKEQADAAKRRFAQGEPSDHLCLYNAYEAWRACPR-RDQQDFCHVNFLSPSALRTASEVRGQFQTLLRDAGLIPRDRDQLAELNRHSEMPKFWPVVRAAMCSGLYPNLVRVDYGKKKFKLLSADHSTLNPHPSSVTS--EGNPFNRRWAYYHEMCRTPGGLFIYDLTEASALPLLLF 3196
D+Q+ R LPA + +E+ILD +NNNQVVV+SGETGCGKTTQ VPQF++D + + NI+CTQPRRISA+GVA+RVA+ERGE +G G VGYQIRLERR ++ T+L+F TTG+LLRRLQ DP LE VTH++LDEVHER++DSDFLI+ILRDL ++RKDL +V+MSATLNA+ F++YF+ + P LNIPG TFPV+ FYLEDA+ELT + T + G KR G Q S +RE RYS RT+ ++ FD S++P++VI L++ + + DG A+L+FL GWE+I ++ LE Q + W L LH M T+ Q+ +F RPP G RK+V+ATNIAESSITIDDV FVID KHKEK+YD E + LLP WVS+AS+ QRRGRAGRV+ G+ WHL P+ E +Y LPEIVRT L+ LC+Q+R LGLA PG GV F+NKA+TPP + NA+ LL RIGAF E LT +G LA LP+ PQIGK+L++ C+LGCL+PV+ + ++LSQR F+ + KKE+ADAAK F G SDH + NAY W R R+ + F +FL+ + L+ EV Q+ TLL DAG+I +D LNRHS+ W VV+A M +GLYPN+ R+D + + + PHP+SV + E +++RW YH+ RT GG++++D +E S LPL LF
Sbjct: 224 DLQTFRNNLPAASMKEQILDAVNNNQVVVVSGETGCGKTTQ---------------------------------VPQFILDD-------AWSRNEHCNIICTQPRRISAMGVADRVASERGENLGRQPNGVVGYQIRLERRVTDLTRLMFCTTGVLLRRLQVDPDLENVTHIVLDEVHERSIDSDFLIVILRDLLVRRKDLRIVMMSATLNAETFASYFAKSLDVDIPILNIPGRTFPVDAFYLEDAIELTNCH-SMTDDPMGGQKRSNYGGGGRNNSKQPTQSGEQKRELENSLMTSRKRYSARTVATVCDEFDPSKIPIEVIRALIETIDRDYPVDDKDGHAVLVFLPGWEDIRKTNELLEERNKQHKKWLLCPLHGMMGTADQKKIFNRPPPGKRKVVLATNIAESSITIDDVAFVIDSAKHKEKTYDEELNIACLLPTWVSKASASQRRGRAGRVRAGKAWHLVPKHMHDTEFDDYALPEIVRTPLDQLCMQIRALGLAKPGDGGVLEFLNKAITPPSEKSSENAVELLKRIGAFDQSEGLTAMGSCLATLPMGPQIGKSLIMACILGCLEPVVLLTSMLSQRTIFISTLDKKEEADAAKHTFTDGIRSDHRAMLNAYYQWDDEERYRNGKQFAWEHFLNHNQLKMTREVADQYITLLSDAGVIKKDGMTNKRLNRHSDN---WAVVKACMVAGLYPNVGRLDASGRFPTVYIKGLGIVKPHPASVNAKAEAGQWSKRWVMYHDKVRTQGGIYLFDTSEISPLPLALF 951
BLAST of mRNA_P-littoralis_Contig125.35.11 vs. uniprot
Match: A0A6T6CK03_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CK03_9RHOD) HSP 1 Score: 621 bits (1602), Expect = 4.190e-198 Identity = 361/788 (45.81%), Postives = 487/788 (61.80%), Query Frame = 2
Query: 863 PQGRRREVWGGNSXXXXXXXXXXXKGAAYDDIQSTRRKLPAYARQEEILDVINNNQVVVISGETGCGKTTQGGSGRRGKKRKGFRCESGGILWWGPSPSAEAASVPQFLMDQYRRDGVGESATEKPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLERRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQ-RKDLTLVLMSATLNADLFSNYFSNAPKLNIPGYTFPVEEFYLEDALELTRTRITPTVNRQGRVK-RKPLGPAEYQQKASAAAERER-GRGRDLPPGRYSQRTLESLAMFD-ESEVPLDVIVDLVQYVHAYEGDGAILIFLSGWEEISAVHDRLE---MLPQARAWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVAEMSEYQLPEIVRTSLESLCLQVRHLGLASPGRRGVAGFINKALTPPGVVALNNALTLLTRIGAFRTD-ESLTPLGKHLALLPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMSKKEQADAAKRRFAQGEPSDHLCLYNAYEAWR-ACPRRDQQDFCHVNFLSPSALRTASEVRGQFQTLLRDAGLIPRDRDQLAELNRHSEMPKFWPVVRAAMCSGLYPNLVRVDYGKKKFKLLSADHSTLNPHPSSVTSEGNPFNRRWAYYHEMCRTPGGLFIYDLTEASALPLLLFG 3199
P GRRRE+ G + Q R +LPA++ Q+E+L+ + +QVVVISGETGCGKTTQ VPQF++D T++ I+CTQPRRISA+ VAERVAAERG ++G VGYQIRLE + S+ T+LLF TTGILLRRLQ+DP L GVTHVI+DE+HERT+++DFL+IILRDL K++ ++LMSATLNA +F+ YF + P ++IPG+T+PV E++LED +E+T + + R + ++ A+ + + A E E R + RYS TLESLA E + LD+I +++ ++ DGA+LIFL GW++IS + D+L+ A +++ LHS +PT QR +F RPP G RKI+++TNIAE+SIT+DDVVFVID GK KEK+YD V LLPA+VS+ASSRQRRGRAGR+QPG C+HL+ A M +YQLPEI+RT LESLCLQV+ L L V+ F++KAL PP A NNA+ LL IGA TD E LTPLGKHL+ P++P++GK L+ + CLDPVLTIAA L RNPFVMP+++KE+AD K RFA G SDH NA+ W+ A + F NFLS S+L E++ QF LL DAG I + ++ + WP++ + + +GLYPN+ R+D+G+K+ KLL+ + T+ PHP SV F W ++E ++ LFI D T L L LFG
Sbjct: 41 PPGRRRELVG-------TAPEATAQPPRSRPFQDQRMRLPAWSHQKEVLEAVRGSQVVVISGETGCGKTTQ---------------------------------VPQFILDN----------TKERSFIICTQPRRISAVSVAERVAAERGSSIGAEVGYQIRLESQTSKETRLLFCTTGILLRRLQSDPSLNGVTHVIVDEIHERTLEADFLLIILRDLIRSTNKNVRVILMSATLNAGMFAQYFDDCPTVHIPGFTYPVTEYFLEDIIEMTGFQFRESQGGSFRPRDQRSREKAKQMRNRNPAEEIEHLERSLSVNGKRYSNSTLESLANAAFEDNISLDLIEEILIHIVEKNEDGAVLIFLPGWDDISKLCDKLKNNVRFRDASKYQILPLHSSLPTVNQRQIFERPPPGIRKIIVSTNIAETSITVDDVVFVIDSGKFKEKTYDAATNVSCLLPAFVSKASSRQRRGRAGRIQPGFCFHLFSSIDHANMEDYQLPEILRTPLESLCLQVKALKLGV-----VSKFLSKALEPPDPRATNNAMELLRVIGALYTDREELTPLGKHLSNFPLDPRLGKMLIYAVIFSCLDPVLTIAASLGFRNPFVMPLNRKEEADETKMRFATGLFSDHAAYLNAFCQWKNAGGSKGGSRFAWSNFLSHSSLEMIDEMKDQFLRLLEDAGFISG-----RVVGKYDKNSTCWPLIISILTAGLYPNIARIDFGRKRLKLLTKNDGTVKPHPGSVNKFNASFAHHWMVFYEKVKS-SDLFILDSTAVPPLALCLFG 767
BLAST of mRNA_P-littoralis_Contig125.35.11 vs. uniprot
Match: A0A2R6XFW7_MARPO (RNA helicase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XFW7_MARPO) HSP 1 Score: 622 bits (1603), Expect = 4.550e-196 Identity = 346/753 (45.95%), Postives = 483/753 (64.14%), Query Frame = 2
Query: 968 RRKLPAYARQEEILDVINNNQVVVISGETGCGKTTQGGSGRRGKKRKGFRCESGGILWWGPSPSAEAASVPQFLMDQYRRDGVGESATEKPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLERRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSNYFSNAPKLNIPGYTFPVEEFYLEDALELTRTRI----TPTVNRQGRVKRKPLGPAEYQQKASAAAERERGRGRDLPPGRYSQRTLESLAMFDESEVPLDVIVDLVQYVHAYEGD-GAILIFLSGWEEISAVHDRLEM---LPQARAWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVAEMSEYQLPEIVRTSLESLCLQVRHLGLASPGRRGVAGFINKALTPPGVVALNNALTLLTRIGAFRTDESLTPLGKHLALLPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMSKKEQADAAKRRFAQGEPSDHLCLYNAYEAWRACPRRD-QQDFCHVNFLSPSALRTASEVRGQFQTLLRDAGLIPRDRDQLAELNRHSEMPKFWPVVRAAMCSGLYPNLVRVDYGKKKFKLLSADHSTLNPHPSSVTSEGNPFNRRWAYYHEMCRTPGGLFIYDLTEASALPLLLFG 3199
R KLPA+ +EE+L + NNQVVV+SGETGCGKTTQ +PQFL++Q G G NI+CTQPRRISA+ VA RVAAERG+ +G +VGYQIRLE + SE+T+LLF TTG+LLRRL +P+L GV+HV++DE+HER ++ DFL+IILRDL +R DL LVLMSAT+NA+LFS YF NAP ++IPG+TFPV+E +LED LE TR R+ P+ N G+ +R ++K + D RYS+ T SL ++ E+ L ++ ++++ E + GA+L+FL+GW++IS + ++L+ L A + L LH MPT QR++F PPRG RKIV+ATNIAE+SITIDDVV+VID GK KE SYD K+ LLP+W+S+AS+ QRRGRAGRV+ G C+HLYP+ EM ++QLPEI+RT L+ LCLQ++ LGL S G F++KAL PP +A+ NA+ LL IGA E LTPLG HLA LPV+P++GK L++G + CL P LTIAA L+ R+PFV+P+ +KE+AD ++RRFA SDH+ L AY++W+A R +++FC N+LSP L+ ++R QF L+ D G + D+ +L E N +S + +V+A +C+GL+P++V+ K+ + + + PHP+SV + N F W Y + +T G+++ T S LL+FG
Sbjct: 283 REKLPAFKMKEELLRAVANNQVVVVSGETGCGKTTQ---------------------------------LPQFLLEQEVEAGRGSKC-----NIICTQPRRISAMSVAARVAAERGDALGQSVGYQIRLESKRSENTRLLFCTTGVLLRRLVQEPELAGVSHVMVDEIHERGMNEDFLLIILRDLLPRRPDLRLVLMSATINAELFSKYFGNAPMMHIPGFTFPVQELFLEDVLEKTRYRVGADQQPSSNYGGQRRRT------QEKKRDPITQAFENADIDAEFRRYSRGTQLSLKAWNGDELDLGLVESTIEHICERESEEGALLVFLTGWDDISKLMEKLKANAALGNASRYLLLPLHGSMPTINQREIFQPPPRGVRKIVLATNIAETSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVRAGVCYHLYPKLVYDEMLKFQLPEILRTPLQELCLQIKSLGLGSIGN-----FLSKALQPPEAMAVQNAIDLLKTIGALDDKEDLTPLGSHLAQLPVDPKVGKMLLMGAVFQCLGPALTIAAALAHRDPFVLPIERKEEADESRRRFAGDTQSDHVALLRAYDSWQAAKREGWEKNFCWTNYLSPPTLQMMEDMRRQFVDLISDIGFV--DKRRLQEYNVYSGDME---MVKAVLCAGLFPSVVQCKQRGKRTVFFTKEDGKVEPHPASVNARVNYFPEPWLVYSDKVKT-SGIYVRQSTNLSDYALLMFG 980
BLAST of mRNA_P-littoralis_Contig125.35.11 vs. uniprot
Match: A0A8J5GRP8_ZINOF (RNA helicase n=6 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GRP8_ZINOF) HSP 1 Score: 608 bits (1567), Expect = 1.330e-192 Identity = 341/749 (45.53%), Postives = 473/749 (63.15%), Query Frame = 2
Query: 968 RRKLPAYARQEEILDVINNNQVVVISGETGCGKTTQGGSGRRGKKRKGFRCESGGILWWGPSPSAEAASVPQFLMDQYRRDGVGESATEKPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLERRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSNYFSNAPKLNIPGYTFPVEEFYLEDALELTRTRITPTV-NRQGRVKRKPLGPAEYQQKASAAAERERGRGRDLPPGRYSQRTLESLAMFDESEVPLDVIVDLVQYVHAYEGDGAILIFLSGWEEISAVHDRLE---MLPQARAWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVAEMSEYQLPEIVRTSLESLCLQVRHLGLASPGRRGVAGFINKALTPPGVVALNNALTLLTRIGAFRTDESLTPLGKHLALLPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMSKKEQADAAKRRFAQGEPSDHLCLYNAYEAWRACPRRDQQD-FCHVNFLSPSALRTASEVRGQFQTLLRDAGLIPRDRDQLAELNRHSEMPKFWPVVRAAMCSGLYPNLVRVDYGKKKFKLLSADHSTLNPHPSSVTSEGNPFNRRWAYYHEMCRTPGGLFIYDLTEASALPLLLFG 3199
R +LPAY ++E L + NQV+V+SGETGCGKTTQ +PQF+++Q G + I+CTQPRRISAI VA R+A+ER E++G TVGYQIRLE ++S+ T+LLF TTG+LLRRL +P L GV+HV++DE+HER ++ DFLIIILRDL +R DL +VLMSATLNADLFS YF N+P ++IPG+TFPV EF+LED +E TR +ITP N QG +R+ + + K +E G D+ YS T +SL + +++ L ++ ++Y+ EGDGAIL+FL+GW+EIS + ++++ L + + + LH MPT QR++F RPP+ R+IV+ATNIAESSITIDDVV+V+D GK KE SYD K+ LLP+W+S+AS+ QRRGRAGRVQPG C+ LYP+ M +YQLPEI+RT L+ LCL ++ L L +A F+ KAL PP +++ NA+ LL IGA E LTPLG+HL LP++P IGK L++G + CLDP LTIAA L+ R+PFV+P+++KE+AD+AKR FA SDH+ L NA+EAW+ ++ FC NFLSP L+ ++R QF LL D G + + + A +M ++ A +C+GLYPN+++ K+ S D ++ HPSSV + N F + Y + ++ ++I D T S LLLFG
Sbjct: 177 RERLPAYKMKDEFLTAVAENQVLVVSGETGCGKTTQ---------------------------------LPQFILEQEIEHLRGADCS-----IICTQPRRISAISVATRIASERDESIGETVGYQIRLEAKSSKLTRLLFCTTGVLLRRLVQEPDLAGVSHVLVDEIHERGINEDFLIIILRDLLPRRPDLRVVLMSATLNADLFSKYFGNSPVIHIPGFTFPVTEFFLEDIIEKTRYKITPEFDNYQGNSRRRRMRQSSA--KCDPLSEMFEGVDIDVQYKNYSISTRQSLEAWSSAQLELGLVEATIEYICRNEGDGAILVFLTGWDEISKLLEKIKGNIYLGDSNKFLVLPLHGSMPTVNQREIFDRPPKNIRQIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPKIIHDAMPQYQLPEILRTPLQELCLNIKSLQLGV-----IAAFLAKALQPPDPLSVKNAVELLKAIGALDETEELTPLGRHLCTLPLDPNIGKMLLIGSIFQCLDPALTIAAALAHRDPFVLPINRKEEADSAKRFFAGDSCSDHIALRNAFEAWKDAKHGGRERAFCWENFLSPITLQMMEDMRKQFLDLLSDIGFVDKAKGAKAYNQYGDDME----MICAVLCAGLYPNVIQCKRRGKRTAFYSKDVGKVDIHPSSVNARVNLFPLSYMIYSDKVKS-SSIYIRDSTNISDYALLLFG 875
BLAST of mRNA_P-littoralis_Contig125.35.11 vs. uniprot
Match: UPI00125E169F (DExH-box ATP-dependent RNA helicase DExH1 isoform X1 n=4 Tax=Ipomoea TaxID=4119 RepID=UPI00125E169F) HSP 1 Score: 610 bits (1574), Expect = 1.720e-192 Identity = 345/753 (45.82%), Postives = 472/753 (62.68%), Query Frame = 2
Query: 956 IQSTRRKLPAYARQEEILDVINNNQVVVISGETGCGKTTQGGSGRRGKKRKGFRCESGGILWWGPSPSAEAASVPQFLMDQYRRDGVGESATEKPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLERRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSNYFSNAPKLNIPGYTFPVEEFYLEDALELTRTRITPTV-NRQGRVKRKPLGPAEYQQKASAAAERERGRGRDLPPGRYSQRTLESLAMFDESEVPLDVIVDLVQYVHAYEGDGAILIFLSGWEEISAVHDRLEM---LPQARAWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVAEMSEYQLPEIVRTSLESLCLQVRHLGLASPGRRGVAGFINKALTPPGVVALNNALTLLTRIGAFRTDESLTPLGKHLALLPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMSKKEQADAAKRRFAQGEPSDHLCLYNAYEAWRACPRRDQQD-FCHVNFLSPSALRTASEVRGQFQTLLRDAGLIPRDRDQLAELNRHSEMPKFWPVVRAAMCSGLYPNLVRVDYGKKKFKLLSADHSTLNPHPSSVTSEGNPFNRRWAYYHEMCRTPGGLFIYDLTEASALPLLLFG 3199
+ S R KLPA+ + E L + +NQV+V+SGETGCGKTTQ +PQF++++ G + NI+CTQPRRISAI VA R+++ERGE +G TVGYQIRLE + S T+LLF TTG+LLR+L DP + G+TH+++DE+HER +D DFL+IILRDL +R DL L+LMSAT+NA+LFS YF NAP ++IPG T+PV E +LED LE TR RI P N QG +R+ + + K E D YS T +SL + S++ L ++ +Q++ +EGDGAIL+FL+GW++IS + D++++ L R + + LH MPT QR++F RPP RKIV+ATNIAESSITIDDVV+VID GK KE SYD K+ LLP+W+S+AS+ QRRGRAGRVQPG C+ LYP+ M EYQLPEI+RT L+ LCL ++ L L + ++ F+NKAL PP +++ NA+ LL IGA E LTPLG+HL LP++P IGK L++G CL+P LTIAA L+ R+PFV+P+++KE+ADAAKR FA SDH+ L AYE W+ R+ Q+ FC NFLSP ++ +++R QF LL D G I + + A ++E +V A +C+GLYPN+V+ K+ S D ++ HP+SV + + F + Y E +T +FI D T S LL+FG
Sbjct: 263 MMSFREKLPAFKVKSEFLKAVASNQVLVVSGETGCGKTTQ---------------------------------LPQFILEEEIASKRGANC-----NIICTQPRRISAISVAARISSERGENLGETVGYQIRLESKRSAETRLLFCTTGVLLRQLVRDPYITGITHLLVDEIHERGMDEDFLLIILRDLLPRRPDLRLILMSATINAELFSKYFGNAPTIHIPGLTYPVSELFLEDVLEKTRYRIKPEFDNVQGNSRRRHR---QQESKKDPLTELFEDVDIDSHYKGYSMTTRQSLETWSGSQLDLGLVEATIQHICCHEGDGAILVFLTGWDDISKLLDKIKVNNFLGDPRKFLVLPLHGSMPTVNQREIFDRPPPNVRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPKLLHDAMLEYQLPEILRTPLQELCLHIKSLQLGA-----ISSFLNKALQPPDPLSVQNAIELLRTIGALDDAEELTPLGRHLCTLPLDPNIGKMLLMGSFFRCLNPALTIAAALAYRDPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAYEGWKDAKRQGQERAFCWENFLSPITMQMMADMRMQFLDLLSDIGFIDKSKGPQA----YNEYSNDLEMVCAILCAGLYPNVVQCKRRGKRTAFYSKDVGKVDIHPASVNASVHLFPLPFLVYSEKVKT-SSIFIRDSTNISDYTLLMFG 964
BLAST of mRNA_P-littoralis_Contig125.35.11 vs. uniprot
Match: A0A0P0XV93_ORYSJ (RNA helicase n=9 Tax=Oryza TaxID=4527 RepID=A0A0P0XV93_ORYSJ) HSP 1 Score: 606 bits (1562), Expect = 2.930e-191 Identity = 346/753 (45.95%), Postives = 473/753 (62.82%), Query Frame = 2
Query: 956 IQSTRRKLPAYARQEEILDVINNNQVVVISGETGCGKTTQGGSGRRGKKRKGFRCESGGILWWGPSPSAEAASVPQFLMDQYRRDGVGESATEKPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLERRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSNYFSNAPKLNIPGYTFPVEEFYLEDALELTRTRI-TPTVNRQGRVKRKPLGPAEYQQKASAAAERERGRGRDLPPGRYSQRTLESLAMFDESEVPLDVIVDLVQYVHAYEGDGAILIFLSGWEEISAVHDRLE---MLPQARAWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVAEMSEYQLPEIVRTSLESLCLQVRHLGLASPGRRGVAGFINKALTPPGVVALNNALTLLTRIGAFRTDESLTPLGKHLALLPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMSKKEQADAAKRRFAQGEPSDHLCLYNAYEAWRACPRRDQQ-DFCHVNFLSPSALRTASEVRGQFQTLLRDAGLIPRDRDQLAELNRHSEMPKFWPVVRAAMCSGLYPNLVRVDYGKKKFKLLSADHSTLNPHPSSVTSEGNPFNRRWAYYHEMCRTPGGLFIYDLTEASALPLLLFG 3199
+QS R KLPA+ +EE L + NQV+VISGETGCGKTTQ +PQF++++ + G + I+CTQPRRISAI VA R+A+ERGE +G TVGYQIRLE + S T+LLF TTG+LLRRL +P L GV+H+++DE+HER ++ DFLIIILRDL +R DL LVLMSAT+NA+LFS YF AP ++IPG+TFPV E +LED LE TR +I + N QG +RK L + + A + + + G YS T +SL + +E+ L ++ ++Y+ +EG+GAIL+FL+GW+EIS + D+++ +L + + + LH MPT QR++F RPP RKIV+ATNIAESSITIDDVV+VID GK KE SYD K+ LLP+W+S+AS+ QRRGRAGRVQPG C+ LYP+ M ++QLPEI+RT L+ LCL ++ L L + VA F+ KAL PP +++NNA+ LL +GA E LT LG+HL LP++P IGK L++G + CLDP LTIAA L+ RNPFV+P+ +KE+ADA KR FA SDH+ L A+EAW+ R ++ FC NFLSP L+ ++R QF LL D G + + R L ++ K +V A +C+GLYPN+V+ K+ + D ++ HPSSV + + F + Y E +T +++ D T S LLLFG
Sbjct: 223 MQSFRDKLPAFKMREEFLKAVAANQVLVISGETGCGKTTQ---------------------------------LPQFILEEEIDNLRGADCS-----IICTQPRRISAISVAARIASERGEELGDTVGYQIRLESKRSAQTRLLFCTTGVLLRRLVQEPDLVGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLVLMSATINAELFSKYFGEAPIMHIPGFTFPVTELFLEDILEKTRYKINSERDNFQGNSRRKRLASVKSDPISDAFEDVDIYK----EYGNYSVATRQSLEAWSATELNLSLVEGTIEYICRHEGEGAILVFLTGWDEISKLLDKIKGNNLLGNSNRFLVIPLHGSMPTVNQREIFDRPPANMRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGACYRLYPKVIYDAMPQFQLPEILRTPLQELCLTIKSLQLGA-----VASFLAKALQPPDPLSVNNAIELLKTVGALDDVEELTSLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPFVLPIDRKEEADAVKRSFAGDSCSDHIALVKAFEAWKEARRSGRERSFCWENFLSPMTLQMMDDMRNQFFDLLSDIGFVSKTRG----LKAYNYYGKDLEMVCAVLCAGLYPNVVQCKRRGKRTAFYTKDVGKVDIHPSSVNAGIHQFPLPYLVYSEKVKT-ASIYVRDSTNISDYALLLFG 923
BLAST of mRNA_P-littoralis_Contig125.35.11 vs. uniprot
Match: A0A2T8I298_9POAL (RNA helicase n=12 Tax=Paniceae TaxID=147428 RepID=A0A2T8I298_9POAL) HSP 1 Score: 602 bits (1552), Expect = 3.450e-191 Identity = 345/753 (45.82%), Postives = 471/753 (62.55%), Query Frame = 2
Query: 956 IQSTRRKLPAYARQEEILDVINNNQVVVISGETGCGKTTQGGSGRRGKKRKGFRCESGGILWWGPSPSAEAASVPQFLMDQYRRDGVGESATEKPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLERRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSNYFSNAPKLNIPGYTFPVEEFYLEDALELTRTRI-TPTVNRQGRVKRKPLGPAEYQQKASAAAERERGRGRDLPPGRYSQRTLESLAMFDESEVPLDVIVDLVQYVHAYEGDGAILIFLSGWEEISAVHDRLE---MLPQARAWRLYALHSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVAEMSEYQLPEIVRTSLESLCLQVRHLGLASPGRRGVAGFINKALTPPGVVALNNALTLLTRIGAFRTDESLTPLGKHLALLPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMSKKEQADAAKRRFAQGEPSDHLCLYNAYEAWRACPRRDQQ-DFCHVNFLSPSALRTASEVRGQFQTLLRDAGLIPRDRDQLAELNRHSEMPKFWPVVRAAMCSGLYPNLVRVDYGKKKFKLLSADHSTLNPHPSSVTSEGNPFNRRWAYYHEMCRTPGGLFIYDLTEASALPLLLFG 3199
+QS R KLPA+ +E L + NQV+VISGETGCGKTTQ +PQF++++ + G + I+CTQPRRISAI VA RVA+ERGE +G TVGYQIRLE + S T+LLF TTG+LLRRL +P L GV+H+++DE+HER ++ DFLIIILRDL +R DL LVLMSAT+NA+LFS YF +AP ++IPG+TFPV EF+LED LE TR +I + + G ++K L K+ ++ D G YS T +SL + +E+ L ++ + ++Y+ YE +GAIL+FL+GW+EIS + D+++ L + + + LH MPT QR++F RPP RKIV+ATNIAESSITIDDVV+VID GK KE SYD K+ LLP+W+S+AS+ QRRGRAGRVQPG C+ LYP+ M ++QLPEI+RT L+ LCL ++ L L + V+ F+ K+L PP +++ NA+ LL IGA E LT LG+HL LP++P +GK L++G + CLDPVLTIAA L+ RNPFV+P+ +KE+ADA KR FA SDH+ L A+ AW+ R ++ FC NFLSP L+ ++R QF LL D G + + R A S++ VVRA +C+GLYPN+V+ K+ + D ++ HPSSV + N F + Y E +T +++ D T S LLLFG
Sbjct: 116 MQSFREKLPAFNMREGFLKAVAANQVLVISGETGCGKTTQ---------------------------------LPQFILEEEIDNLRGADCS-----IICTQPRRISAISVAARVASERGEELGETVGYQIRLESKRSAQTRLLFCTTGVLLRRLVQEPDLVGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLVLMSATINAELFSKYFGDAPIMHIPGFTFPVTEFFLEDVLEKTRYKIKSERDSSAGSSRKKRLSSV----KSDPLSDLFEDIDIDKEYGNYSITTRQSLEAWSAAELDLSLVENTIEYICRYEAEGAILVFLTGWDEISKLLDKIKGNTFLGSSNRFLVLPLHGSMPTVNQREIFDRPPTNMRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASTHQRRGRAGRVQPGFCYRLYPKVIHDAMPQFQLPEILRTPLQELCLTIKSLQLGA-----VSSFLAKSLQPPDPLSVKNAIELLKTIGALDDMEELTSLGRHLCTLPLDPNLGKMLLMGSVFQCLDPVLTIAAALAYRNPFVLPIDRKEEADAVKRSFAGDSCSDHIALLKAFVAWKEAKRSGRERSFCWENFLSPMTLKMMDDMRNQFFDLLSDIGFVSKTRGVKAYNQYGSDLE----VVRAVLCAGLYPNVVQCKRRGKRTAFYTKDVGKVDIHPSSVNAFVNQFPLPYLVYSEKVKT-ASIYVRDSTNISDYALLLFG 816
BLAST of mRNA_P-littoralis_Contig125.35.11 vs. uniprot
Match: A0A7N0V4Q0_KALFE (RNA helicase n=3 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0V4Q0_KALFE) HSP 1 Score: 606 bits (1563), Expect = 5.440e-191 Identity = 342/751 (45.54%), Postives = 475/751 (63.25%), Query Frame = 2
Query: 956 IQSTRRKLPAYARQEEILDVINNNQVVVISGETGCGKTTQGGSGRRGKKRKGFRCESGGILWWGPSPSAEAASVPQFLMDQYRRDGVGESATEKPYNIVCTQPRRISAIGVAERVAAERGETVGGTVGYQIRLERRASEHTKLLFVTTGILLRRLQADPQLEGVTHVILDEVHERTVDSDFLIIILRDLALQRKDLTLVLMSATLNADLFSNYFSNAPKLNIPGYTFPVEEFYLEDALELTRTRITPTVNRQGRVKRKPLGPAEYQQKASAAAERERGRGRDLPPGRYSQRTLESLAMFDESEVPLDVIVDLVQYVHAYEGDGAILIFLSGWEEISAVHDRLEMLPQARAWRLYAL--HSQMPTSQQRDVFLRPPRGTRKIVIATNIAESSITIDDVVFVIDGGKHKEKSYDPEAKVQSLLPAWVSQASSRQRRGRAGRVQPGRCWHLYPRSKVAEMSEYQLPEIVRTSLESLCLQVRHLGLASPGRRGVAGFINKALTPPGVVALNNALTLLTRIGAFRTDESLTPLGKHLALLPVEPQIGKALVLGCMLGCLDPVLTIAALLSQRNPFVMPMSKKEQADAAKRRFAQGEPSDHLCLYNAYEAWRACPRR-DQQDFCHVNFLSPSALRTASEVRGQFQTLLRDAGLIPRDRDQLAELNRHSEMPKFWPVVRAAMCSGLYPNLVRVDYGKKKFKLLSADHSTLNPHPSSVTSEGNPFNRRWAYYHEMCRTPGGLFIYDLTEASALPLLLFG 3199
+Q R KLPA+ ++E L+ ++ NQV+V+SGETGCGKTTQ +PQF++++ G NI+CTQPRRISAI VA R+A+E+GE++G T+GYQIRLE + SE T+LLF TTG+LLR+L DP+L GV+H+++DE+HER ++ DFL+IILRDL +R D+ L+LMSAT+NADLFS YF NAP ++IPG+TFPV E +LED LE T+ +I + R R+ G E +K A E D+ +YS T +SL + S + ++ ++Y+ +EGDGAIL+FL+GW++IS +HDR++ R + L H MPT QR++F RPP RKIV+ATNIAESSITIDDVV+VID GK KE SYD K+ LLP+W+S+AS+RQRRGRAGRVQPG C+ LYP+ M +YQLPEI+RT L+ LCL ++ L L S G F+ KAL PP +++ NA+ LL IGA E LTPLG+HL+ +P++P IGK L++G + CLDP LTIAA L+ R+PFV+P+++KE+ADAAKR FA SDH+ L NA+E W+ R+ + + FC NFLSP L+ ++R QF LL D G + R + N +++ +V A +C+GLYPN+V+ K+ + + ++ HP+SV + + F + Y E +T ++I D T S LLLFG
Sbjct: 257 MQLFREKLPAFKVKDEFLNAVSKNQVLVVSGETGCGKTTQ---------------------------------LPQFILEEEISSLRGAKC-----NIICTQPRRISAISVAARIASEQGESLGETIGYQIRLESKRSEQTRLLFCTTGVLLRKLVQDPELSGVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDMRLILMSATINADLFSKYFCNAPTIHIPGFTFPVAELFLEDVLEKTQYKIKSEFDNYQRNSRR-RGKLEDSKKDPITALFE-DIDVDVCYRKYSSATRQSLEAWSGSLLDFSLVEATIEYICRHEGDGAILVFLTGWDDISKLHDRVKENYFLRDPKFLVLPVHGSMPTINQREIFERPPPNVRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASARQRRGRAGRVQPGVCYRLYPQLVHDAMPDYQLPEILRTPLQELCLHIKSLQLGSIG-----SFLAKALQPPDALSVQNAIELLKTIGALDDQEELTPLGRHLSTIPLDPNIGKMLLIGSVFQCLDPALTIAAALAHRDPFVLPLNRKEEADAAKRSFAGDSCSDHIALLNAFERWKDAKRKGNDRAFCWENFLSPVTLQMMDDMRKQFLDLLSDIGFVNRYQAS----NSYNKYSSDLEMVSAILCAGLYPNVVQCKRRGKRTAFFTKEVGKVDIHPASVNAGVHLFPLPYMVYSEKVKTTS-IYIRDSTNISDYALLLFG 957 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.35.11 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig125.35.11 >prot_P-littoralis_Contig125.35.11 ID=prot_P-littoralis_Contig125.35.11|Name=mRNA_P-littoralis_Contig125.35.11|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1446bp MSYYGRASGIHGSQGGNYNSAGPPSQPPPGVGGGGYYQPVPAPAGQYGIYback to top mRNA from alignment at P-littoralis_Contig125:138529..174024- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig125.35.11 ID=mRNA_P-littoralis_Contig125.35.11|Name=mRNA_P-littoralis_Contig125.35.11|organism=Pylaiella littoralis U1_48|type=mRNA|length=35496bp|location=Sequence derived from alignment at P-littoralis_Contig125:138529..174024- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig125:138529..174024- >mRNA_P-littoralis_Contig125.35.11 ID=mRNA_P-littoralis_Contig125.35.11|Name=mRNA_P-littoralis_Contig125.35.11|organism=Pylaiella littoralis U1_48|type=CDS|length=4338bp|location=Sequence derived from alignment at P-littoralis_Contig125:138529..174024- (Pylaiella littoralis U1_48)back to top |