mRNA_P-littoralis_Contig1248.16.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1248.16.1 vs. uniprot
Match: A0A6C0JA70_9ZZZZ (DUF4338 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JA70_9ZZZZ) HSP 1 Score: 73.9 bits (180), Expect = 9.770e-13 Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 1
Query: 127 FKEQACRRNIRVSISFDEYSSIVRTACWYCGEFTYKGYSEVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFLGKVKHI 369
+K+ + +RNI+ +IS EY +I+ C YCG F +G + +DRV + YE N+VPCCKTCN +KG L++ F K+K+I
Sbjct: 365 YKKSSAKRNIKFNISETEYINILTYPCKYCGCFN-QGANGIDRVHSELPYEIGNIVPCCKTCNSLKGTLTLLQFKQKLKNI 444
BLAST of mRNA_P-littoralis_Contig1248.16.1 vs. uniprot
Match: A0A843A3E2_9ARCH (Uncharacterized protein n=1 Tax=Thermoplasmata archaeon TaxID=1906666 RepID=A0A843A3E2_9ARCH) HSP 1 Score: 64.3 bits (155), Expect = 1.450e-10 Identity = 35/96 (36.46%), Postives = 51/96 (53.12%), Query Frame = 1
Query: 127 FKEQACRRNIRVSISFDEYSSIVRTACWYCG-----------EFTYKG----YSEVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFLGKVKHI 369
+K A R +++ +E+ + ++ C+YCG + KG Y+ +DRV N+ YE N VPCCKTCN MKG L N+F K+K I
Sbjct: 26 YKRTARIREYAFTLTKEEFLELTKSDCFYCGTEPKQYKSKYGNKSRKGIPFVYNGIDRVDNSVGYEYANCVPCCKTCNRMKGCLGFNEFTKKIKEI 121
BLAST of mRNA_P-littoralis_Contig1248.16.1 vs. uniprot
Match: A0A6C0ITL0_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ITL0_9ZZZZ) HSP 1 Score: 65.1 bits (157), Expect = 1.160e-9 Identity = 33/86 (38.37%), Postives = 50/86 (58.14%), Query Frame = 1
Query: 115 RWRVFKEQACRRNIRVSISFDEYSSIVRTACWYCGEFTYKGY-SEVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFLGKVKHI 369
R++ ++ A ++ I +S DE ++ +C+YC G+ + +DR + Y KDNVV CCK CN++KG L NDFL V HI
Sbjct: 274 RFKYYERCAIQKGINFDLSKDECCNLFDKSCYYCKHKDDNGFLNGIDRKSSYLGYIKDNVVTCCKMCNYIKGSLGHNDFLQIVDHI 359
BLAST of mRNA_P-littoralis_Contig1248.16.1 vs. uniprot
Match: L8GNC2_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GNC2_ACACA) HSP 1 Score: 60.5 bits (145), Expect = 2.350e-9 Identity = 28/81 (34.57%), Postives = 45/81 (55.56%), Query Frame = 1
Query: 127 FKEQACRRNIRVSISFDEYSSIVRTACWYCGEFTYKGYSEVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFLGKVKHI 369
+ ++A +RN+ + + ++ + C+ CG + G VDR N Y +N +PCCKTCNF+KG L + D L +V I
Sbjct: 19 YMKKAAKRNLVFELERSHFDELLGSPCYLCGVRSAGG---VDRTDNTVGYTVENAMPCCKTCNFLKGTLPLCDVLTRVDEI 96
BLAST of mRNA_P-littoralis_Contig1248.16.1 vs. uniprot
Match: A0A0F9UB66_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9UB66_9ZZZZ) HSP 1 Score: 59.7 bits (143), Expect = 2.360e-8 Identity = 32/96 (33.33%), Postives = 46/96 (47.92%), Query Frame = 1
Query: 127 FKEQACRRNIRVSISFDEYSSIVRTACWYCG--------------EFTYKGYSEVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFLGKVKHIA 372
++ QA R + S+S + +V +C YCG EF Y G +DRV Y N VPCCKTCN+ KG +++ +F + IA
Sbjct: 89 YRHQAKTRGLGFSLSKKHFRELVTNSCHYCGIPPSNSVKKKGSNGEFVYSG---IDRVATKYGYSVKNCVPCCKTCNWAKGTMNLEEFKSWITRIA 181
BLAST of mRNA_P-littoralis_Contig1248.16.1 vs. uniprot
Match: A0A0F9F6T2_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9F6T2_9ZZZZ) HSP 1 Score: 58.2 bits (139), Expect = 2.460e-7 Identity = 28/89 (31.46%), Postives = 44/89 (49.44%), Query Frame = 1
Query: 145 RRNIRVSISFDEYSSIVRTACWYCG--------------EFTYKGYSEVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFLGKVKHI 369
+R I ++SFD + + C+YCG ++ G +DRV N Y +DNVVPCCK CN+ K +S++ F + +
Sbjct: 207 KRKINFTLSFDTFVELTSQHCFYCGTKPSNITVNEAGNGDYVSNG---IDRVDNNKGYIEDNVVPCCKVCNYAKNTMSLDQFYSWISRV 292
BLAST of mRNA_P-littoralis_Contig1248.16.1 vs. uniprot
Match: A0A3C2CGI7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Nomurabacteria bacterium TaxID=2052152 RepID=A0A3C2CGI7_9BACT) HSP 1 Score: 55.1 bits (131), Expect = 1.320e-6 Identity = 25/88 (28.41%), Postives = 48/88 (54.55%), Query Frame = 1
Query: 118 WRVFKEQACRRNIRVSISFDEYSSIVRTACWYCGEFTYKGYSE-----------VDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDF 348
++ + + A R + ++ +E+ S++ +C+YC E + + E +DR+ ++ Y +NVVPCCK CN+ K +SV +F
Sbjct: 83 FKTYADSAKNRCLSFELTKEEFVSLISKSCFYCNEPPSERWHEARGNGHMLSNGLDRIDSSKGYTTNNVVPCCKKCNYAKKQMSVEEF 170
BLAST of mRNA_P-littoralis_Contig1248.16.1 vs. uniprot
Match: A0A6H5JE23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE23_9PHAE) HSP 1 Score: 54.7 bits (130), Expect = 2.640e-6 Identity = 26/35 (74.29%), Postives = 27/35 (77.14%), Query Frame = -2
Query: 279 CCFLAMCLTFPKKSLTESGPFIKLQVLQQGTTLSF 383
CC LAM LTFPK TE PFIKLQVLQ+ TTLSF
Sbjct: 69 CCSLAMSLTFPKNFFTERDPFIKLQVLQEATTLSF 103
BLAST of mRNA_P-littoralis_Contig1248.16.1 vs. uniprot
Match: A0A0F9SS21_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9SS21_9ZZZZ) HSP 1 Score: 51.6 bits (122), Expect = 8.030e-6 Identity = 25/82 (30.49%), Postives = 40/82 (48.78%), Query Frame = 1
Query: 178 EYSSIVRTACWYCG--------------EFTYKGYSEVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFLGKVKHIARKQ 381
++ S+ + C+YCG ++ Y G VDR+ N Y NV+PCCKTCN++K S+ +F + + Q
Sbjct: 34 DFKSLTQMQCYYCGIEPSQIYHNKELNGDYLYNG---VDRIDNNLGYIYGNVLPCCKTCNYVKSNQSMREFQAWIDRLVEHQ 112
BLAST of mRNA_P-littoralis_Contig1248.16.1 vs. uniprot
Match: A0A7C1KMV7_9BACT (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7C1KMV7_9BACT) HSP 1 Score: 52.8 bits (125), Expect = 9.180e-6 Identity = 31/102 (30.39%), Postives = 49/102 (48.04%), Query Frame = 1
Query: 127 FKEQACRRNIRVSISFDEYSSIVRTACWYCG------EFTYKG------YSEVDRVQNAGAYEKDNVVPCCKTCNFMKGPLSVNDFLGKVKHIARKQHALMD 396
+K A R + S+ + +I+ C+YCG + T YS +DR+ + Y +NV+PCCK CN+ K +S+ F KV I Q A+ +
Sbjct: 83 YKRHAINRGYKWSLKRSDVENIINKDCFYCGSSPNNRKITKNSLNNGLLYSGIDRIDSEKDYTDNNVLPCCKICNYAKSNMSIKRF--KVWAIKLGQKAMAE 182 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1248.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1248.16.1 >prot_P-littoralis_Contig1248.16.1 ID=prot_P-littoralis_Contig1248.16.1|Name=mRNA_P-littoralis_Contig1248.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=133bp MNAPEYDKRRIRALQNKRYRRSTAYEKYLKARKTDVVYRWRVFKEQACRRback to top mRNA from alignment at P-littoralis_Contig1248:47232..47630- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1248.16.1 ID=mRNA_P-littoralis_Contig1248.16.1|Name=mRNA_P-littoralis_Contig1248.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=399bp|location=Sequence derived from alignment at P-littoralis_Contig1248:47232..47630- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1248:47232..47630- >mRNA_P-littoralis_Contig1248.16.1 ID=mRNA_P-littoralis_Contig1248.16.1|Name=mRNA_P-littoralis_Contig1248.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=399bp|location=Sequence derived from alignment at P-littoralis_Contig1248:47232..47630- (Pylaiella littoralis U1_48)back to top |