mRNA_P-littoralis_Contig1247.10.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1247.10.1
Unique NamemRNA_P-littoralis_Contig1247.10.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1247.10.1 vs. uniprot
Match: A0A0L0FN09_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FN09_9EUKA)

HSP 1 Score: 269 bits (687), Expect = 2.960e-85
Identity = 127/276 (46.01%), Postives = 168/276 (60.87%), Query Frame = 1
Query:   61 HDVELYDIDYSYSSAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDIMKAKGCDAVEWDNADLPVHT------VSLTDPLAPSFYGMRRERAVGMGVVMKNNNEAAAFHVDDYDMVVNEECWINGNCVNYWAWAKARKPILNTEYFTTRCMYCTQANLMEMSTIKKVPDLTTCRVDCKSGFDNTQCSDASISGVVSYPIDWTVGTGAVMSEDWCPMTVNTDADECPSDRFATCDPD 870
            +DV+LYDID+  S  VI +L   G+KVMCY SAG+ E +R D +++PA VKGGI++F  GDTF +EAWLDLRR+D++ P+MLER+D+ + KGCDA+E+DNAD   HT      + L   L  + + + +    GMGV +KN+   A F  D YDMVVNEEC++ GNC NYW +    KP+LN EY T  C YC +A  ME STIKK P L  C VDC   +  + C     +             G    + WCPM  N   DE P+ R+ TCDP+
Sbjct:   91 YDVDLYDIDFDTSPQVIKELHKDGRKVMCYFSAGSWEMWRKDADMYPASVKGGILSFASGDTFSNEAWLDLRRMDVIGPLMLERLDVAQQKGCDAIEFDNADTVTHTAKLGGDIELRTQLRVNKWLVAQAHVRGMGVALKNSEMFATFLSDTYDMVVNEECFVMGNCDNYWPFLNREKPVLNCEYTTALCFYCKRAKAMEFSTIKKTPALDACMVDCSHDYSESVCKATGYTDATGKQWKHAKYDGKKNKDGWCPMAQNKQKDESPAKRYGTCDPE 366          
BLAST of mRNA_P-littoralis_Contig1247.10.1 vs. uniprot
Match: A0A0L0FMI3_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FMI3_9EUKA)

HSP 1 Score: 271 bits (692), Expect = 1.460e-83
Identity = 138/280 (49.29%), Postives = 177/280 (63.21%), Query Frame = 1
Query:   61 HDVELYDIDYSYSSAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDIMKAKGCDAVEWDNADLPVH------TVSLTDPLAPSFYGMRRERAVGMGVVMKNNNEAAAFHVDDYDMVVNEECWINGNCVNYWAWAKARKPILNTEYFTTRCMYCTQANLMEMSTIKKVPDLTTCRVDC--KSGFDNTQCSDA---SISGVVSYPIDWTVGTGAVMSEDWCPMTVNTDADECPSDRFATCDP 867
            HDV LYDID+    + IA L + G++VMCY SAG++E +R D  LFPA ++GG + FG GD F DEAWLDLRR D++ PIM+ R+D  KAKGCDAVE+DN D+ +H       + LT  L    + +R+  A GM V +KN+NE A    D YDMVVNEE +INGN  NYW +    KP+LNTEYFT+RC YC  +  M +STIKK PDL +C VDC  +   + T   D+     SG   YP           +E WCP+T+N DA+EC + RFA CDP
Sbjct:  299 HDVPLYDIDFDTPDSTIASLHAAGRRVMCYFSAGSTEKWRIDQELFPAFIQGGPLLFGTGDVFDDEAWLDLRRFDIIGPIMMNRLDAAKAKGCDAVEFDNPDIVIHEHGLAGNIDLTLQLQFDKWCVRQAHARGMSVALKNSNEFAFLLSDTYDMVVNEEAFINGNIDNYWPFLHRDKPVLNTEYFTSRCFYCATSRAMGVSTIKKRPDLDSCLVDCTMEMPLNVTSVCDSIGFEASGRARYPAS---------AEGWCPLTLNLDANECAAPRFAECDP 569          
BLAST of mRNA_P-littoralis_Contig1247.10.1 vs. uniprot
Match: A0A0L0FQ33_9EUKA (EGF-like domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQ33_9EUKA)

HSP 1 Score: 275 bits (704), Expect = 1.480e-83
Identity = 137/280 (48.93%), Postives = 177/280 (63.21%), Query Frame = 1
Query:   61 HDVELYDIDYSYSSAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDIMKAKGCDAVEWDNADLPVH------TVSLTDPLAPSFYGMRRERAVGMGVVMKNNNEAAAFHVDDYDMVVNEECWINGNCVNYWAWAKARKPILNTEYFTTRCMYCTQANLMEMSTIKKVPDLTTCRVDCKSGFD---NTQCSDASI--SGVVSYPIDWTVGTGAVMSEDWCPMTVNTDADECPSDRFATCDP 867
            HDV LYD+D    ++ IA L + G+KVMCY SAG+ ED+R D  LFP  +KGG + FGEGD F DEAWLD+RR+D++APIM++R+D  KAKGCDA+E+DN D+ +H       + LT  L    +G+R+  A GM V +KN+NE A    D YDMVVNEE +INGN  NYW +    KP+LNTEYFT+RC YC  A  M +STIKK PDL +C VDC         + C D     +G   +P +         ++ WCPMT NTD  EC + RF  C+P
Sbjct:  486 HDVPLYDVDIDTPASTIASLHAAGRKVMCYFSAGSYEDWRMDRALFPEFIKGGPLMFGEGDVFTDEAWLDIRRIDIIAPIMMDRLDAAKAKGCDALEFDNPDVIIHEHGLEGNIDLTLQLQFDIWGVRQAHARGMSVALKNSNEFAFLLSDTYDMVVNEEAFINGNIDNYWPFLHRNKPVLNTEYFTSRCFYCATAKAMGVSTIKKRPDLDSCMVDCTMDIPLSVTSVCDDIGFHTAGKAKFPAN---------ADGWCPMTENTDIAECANTRFGECEP 756          
BLAST of mRNA_P-littoralis_Contig1247.10.1 vs. uniprot
Match: A0A0L0FCU9_9EUKA (EGF-like domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FCU9_9EUKA)

HSP 1 Score: 260 bits (664), Expect = 3.350e-81
Identity = 131/283 (46.29%), Postives = 169/283 (59.72%), Query Frame = 1
Query:   64 DVELYDIDYSYSSAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDIMKAKGCDAVEWDNADLPVHT-------VSLTDPLAPSFYGMRRERAVGMGVVMKNNNEAAAFHVDDYDMVVNEECWINGNCVNYWAWAKARKPILNTEYFTTRCMYCTQANLMEMSTIKKVPDLTTCRVDCKSGFDNTQCS-----DASIS-GVVSYPIDWTVGTGAVMSEDWCPMTVNTDADECPSDRFATCDPDV 873
            DV+LYD+D   S+ VI+ L   G+KVMCY SAG+ E+FR D       ++GG + FGEGD F DEAWLDLRR+D+   +MLER+D+ + KGCDA+E+DN D+ +H          L   L  + +   +  A GM V +KN+NE   F  D +DMVVNEECWINGNC +YW +    KP+LN EYFT+ CMYC +A  M  STIKK P L  C   C   +D ++C      DAS S     YP          ++  WCPMT N DA EC + RF TCDP +
Sbjct:  140 DVDLYDVDVDTSATVISQLHDAGRKVMCYFSAGSWEEFRMDEAKLAQSIRGGPLDFGEGDVFTDEAWLDLRRMDMFLEVMLERIDLARDKGCDAIEYDNLDMIIHDHNIPGAEFDLKIQLQFNIWLAEQAHARGMAVALKNSNEFNMFLADTFDMVVNEECWINGNCDHYWPFINRDKPVLNCEYFTSLCMYCDRAAKMNFSTIKKNPPLDACLATCSQEYDTSRCEGVNFPDASGSYAAAKYPN---------LANGWCPMTTNVDAVECENPRFKTCDPAI 413          
BLAST of mRNA_P-littoralis_Contig1247.10.1 vs. uniprot
Match: A0A0L0FQP7_9EUKA (EGF-like domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQP7_9EUKA)

HSP 1 Score: 179 bits (453), Expect = 1.430e-51
Identity = 84/171 (49.12%), Postives = 112/171 (65.50%), Query Frame = 1
Query:   64 DVELYDIDYSYSSAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDIMKAKGCDAVEWDNADLPVHT-------VSLTDPLAPSFYGMRRERAVGMGVVMKNNNEAAAFHVDDYDMVVNEECWINGNCVNYW 555
            DV+LYD+D   S+ VI+ L   G+KVMCY SAG+ E+FR D       ++GG + FGEGD F DEAWLDLRR+D++  +MLER+D+ + KGCDA+E+DN D+ +H          L   L  + +   +  A GM V +KN+NE + F  D +DMVVNEECWI GNC NYW
Sbjct:   77 DVDLYDVDVDTSATVISQLHDAGRKVMCYFSAGSWEEFRMDEAKLAQSIRGGPLDFGEGDVFTDEAWLDLRRMDMILEVMLERIDLARDKGCDAIEYDNLDMYIHDHNIPGAEFDLKIQLQFNIWLAEQAHARGMAVALKNSNEFSMFLADTFDMVVNEECWIFGNCDNYW 247          
BLAST of mRNA_P-littoralis_Contig1247.10.1 vs. uniprot
Match: UPI001969C6AE (endo alpha-1,4 polygalactosaminidase n=1 Tax=Desulfogranum japonicum TaxID=231447 RepID=UPI001969C6AE)

HSP 1 Score: 144 bits (363), Expect = 5.960e-38
Identity = 85/251 (33.86%), Postives = 135/251 (53.78%), Query Frame = 1
Query:    1 MVSYLPK-------GAPIPGADGEGSLH-------DVELYDID-YSYSSAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDIMKAKGCDAVEWDNADLPVH----TVSLTDPLAPSFYGMRRERAVGMGVVMKNNNEAAAFHVDDYDMVVNEECWINGNCVNYWAWAKARKPILNTEYFTTRCMYCTQANLMEMSTIKKVPDLTTCRVDCK 696
            +V YLP          P PG   +  L        DV++YD+D +  S+++I+ L+S+GKKV+CY+SAG+ E++RDD N+FP EV G  +     D +PDE WLD+ R+D++ PIML RMD+   KGCD +E DN D   +     ++  + L  + +      A  + + +KN+ +     V  +D  +NE+C+    C     + +A K +   EY  +   +C+QAN M    +KK   L + RV C+
Sbjct:   24 LVPYLPAYIHGSSWWQPKPGVSWQWQLSGTLDTDLDVDMYDVDLFDTSASMISLLKSQGKKVICYMSAGSWENYRDDANVFPEEVLGKYL-----DGWPDERWLDISRIDILGPIMLRRMDLAVEKGCDGIEPDNIDGYSNDSGFALTSEEQLTYNRWLAEAAHARNLSIGLKNDLDQVQDLVSYFDWALNEQCFQYDECDLLLPFVQAGKAVFGVEYSLSTTTFCSQANSMNFDWLKKNLSLDSWRVSCR 269          
BLAST of mRNA_P-littoralis_Contig1247.10.1 vs. uniprot
Match: A0A1F5JF22_9BACT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_01_FULL_40_11 TaxID=1797762 RepID=A0A1F5JF22_9BACT)

HSP 1 Score: 144 bits (362), Expect = 1.170e-37
Identity = 81/216 (37.50%), Postives = 121/216 (56.02%), Query Frame = 1
Query:   64 DVELYDID-YSYSSAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDIMKAKGCDAVEWDNADLPVHT----VSLTDPLAPSFYGMRRERAVGMGVVMKNNNEAAAFHVDDYDMVVNEECWINGNCVNYWAWAKARKPILNTEYFTTRCMYCTQANLMEMSTIKKVPDLTTCRVDCK 696
            +V +YDID +  S++V+A L++ GKKV+CY SAG+ E++R D N FP  VKG        + +P E WLD+RRLD++ PIM  R+D+ K KGCD VE DN D   +     ++  D +  + +      A G+ V +KN+ E     +  YD  +NE+C+    C     + +A K + N EY      +C QAN M  +++KK  DL   RV C+
Sbjct:   73 NVTMYDIDLFDNSASVVASLKNSGKKVICYYSAGSWENWRPDANQFPDSVKGN------SNGWPGEKWLDIRRLDVLGPIMSARLDLAKQKGCDGVEPDNVDGYTNNTGFPLTYQDQINYNKWTANAAHARGLSVGLKNDIEQVNDLLSYYDWTLNEQCFQYNECDPLTKFVQAGKAVFNVEYKLDTSQFCPQANSMNFNSLKKNLDLDAYRVACR 282          
BLAST of mRNA_P-littoralis_Contig1247.10.1 vs. uniprot
Match: A0A3D4Z2E0_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D4Z2E0_9DELT)

HSP 1 Score: 140 bits (352), Expect = 1.680e-36
Identity = 80/220 (36.36%), Postives = 121/220 (55.00%), Query Frame = 1
Query:   49 EGSLHDVELYDIDYSYSSAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDIMKAKGCDAVEWDNAD----LPVHTVSLTDPLAPSFYGMRRERAVGMGVVMKNNNEAAAFHVDDYDMVVNEECWINGNCVNYWAWAKARKPILNTEYFTTRCMYCTQANLMEMSTIKKVPDLTTCRVDCK 696
            +  ++D++L+D+D S    VI +L S G+KV+CY SAG+ E++R D N FP+ VKG        + +P E WLD+RRLD++ PIM  R+D+  AKGCD VE DN D         ++  D L  + +      A G+ V +KN+ +     V  +D  +NE+C+    C     + KA K + N EY      +C +AN M  +++KK  DL   RV C+
Sbjct:   44 DAQMYDIDLFDVDES----VIDELHSAGRKVICYFSAGSWENWRPDANQFPSSVKG------RNNGWPGEKWLDIRRLDILGPIMKARLDLAVAKGCDGVEPDNVDGYSNRSGFKLTYQDQLHYNKFLAAEAHARGLSVGLKNDVDQVKDLVAFFDWTLNEQCFEYRECDTLLPFIKAGKAVFNVEYKGNTNNFCPKANAMNFNSMKKHLDLDAWRVPCR 253          
BLAST of mRNA_P-littoralis_Contig1247.10.1 vs. uniprot
Match: A0A1F8TSL2_9CHLR (Endo alpha-1,4 polygalactosaminidase n=3 Tax=Chloroflexi TaxID=200795 RepID=A0A1F8TSL2_9CHLR)

HSP 1 Score: 140 bits (353), Expect = 1.990e-36
Identity = 82/215 (38.14%), Postives = 118/215 (54.88%), Query Frame = 1
Query:   67 VELYDID-YSYSSAVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDIMKAKGCDAVEWDNADLPVHTVSLT----DPLAPSFYGMRRERAVGMGVVMKNNNEAAAFHVDDYDMVVNEECWINGNCVNYWAWAKARKPILNTEYFTTRCMYCTQANLMEMSTIKKVPDLTTCRVDCK 696
            V+LY++D +  S   IADL+++G KVMCY SAG+ ED+R D   FPA V G  +   EG  +P E WLD+R L  +APIMLER+ +   KGCD V+ DN D   +         D LA + +       +G+G+ +KN+ E     V  +D  +NEEC+  G C     + +A KP+   EY      +C QAN ++ + I+K  DL   R  C+
Sbjct:   64 VDLYNLDLFDTSPETIADLRARGVKVMCYFSAGSFEDWRPDAGNFPASVLGNDL---EG--WPGERWLDIRNLQALAPIMLERITLAAQKGCDGVDPDNVDGYANATGFPLVAEDQLAYNIFLATAAHQMGLGIGLKNDLEQIPALVSHFDWALNEECFTYGECDLLLPFIQAGKPVFVIEYQLAPEAFCPQANNLQFNAIQKNRDLDAFRFPCR 273          
BLAST of mRNA_P-littoralis_Contig1247.10.1 vs. uniprot
Match: UPI001E363C10 (endo alpha-1,4 polygalactosaminidase n=2 Tax=unclassified Arthrobacter TaxID=235627 RepID=UPI001E363C10)

HSP 1 Score: 137 bits (346), Expect = 4.310e-36
Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 1
Query:   64 DVELYDIDYSYSS-AVIADLQSKGKKVMCYISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPIMLERMDIMKAKGCDAVEWDNADLPVHT----VSLTDPLAPSFYGMRRERAVGMGVVMKNNNEAAAFHVDDYDMVVNEECWINGNCVNYWAWAKARKPILNTEYFTTRCMYCTQANLMEMSTIKKVPDLTTCRVDC 693
            D ++YD+DY  ++ A I  L ++G++ +CY+S G+ EDFR D  LFP  V G  +     D +PDE WLD+RR+D++ PIM  RMD   AKG DAVE DN D  V+     ++  D LA +        A G+ V +KN+ +     VDD+D  VNEEC+  G C  Y  +A   K +L+ EY  +   +C ++  + +S++ K  DL   R  C
Sbjct:    4 DADIYDVDYETTTPADILALNTEGRRSICYLSVGSWEDFRGDAGLFPEAVLGNTL-----DGWPDERWLDIRRMDVLLPIMAARMDTCAAKGFDAVEPDNVDGYVNETGFPLTADDQLAYNRAVAELAHARGLSVGLKNDVDQIPELVDDFDFAVNEECFRYGECEAYKPFADEGKAVLHVEYQGS-LDFCAESRRIGLSSMLKPLDLGPARSSC 212          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1247.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0L0FN09_9EUKA2.960e-8546.01EGF-like domain-containing protein n=1 Tax=Sphaero... [more]
A0A0L0FMI3_9EUKA1.460e-8349.29EGF-like domain-containing protein n=1 Tax=Sphaero... [more]
A0A0L0FQ33_9EUKA1.480e-8348.93EGF-like domain-containing protein n=1 Tax=Sphaero... [more]
A0A0L0FCU9_9EUKA3.350e-8146.29EGF-like domain-containing protein (Fragment) n=1 ... [more]
A0A0L0FQP7_9EUKA1.430e-5149.12EGF-like domain-containing protein (Fragment) n=1 ... [more]
UPI001969C6AE5.960e-3833.86endo alpha-1,4 polygalactosaminidase n=1 Tax=Desul... [more]
A0A1F5JF22_9BACT1.170e-3737.50Endo alpha-1,4 polygalactosaminidase n=1 Tax=Candi... [more]
A0A3D4Z2E0_9DELT1.680e-3636.36Endo alpha-1,4 polygalactosaminidase n=1 Tax=Delta... [more]
A0A1F8TSL2_9CHLR1.990e-3638.14Endo alpha-1,4 polygalactosaminidase n=3 Tax=Chlor... [more]
UPI001E363C104.310e-3638.14endo alpha-1,4 polygalactosaminidase n=2 Tax=uncla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1247contigP-littoralis_Contig1247:48389..50475 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog72019.SARC_08746T0
PFAMsEGF_2,Glyco_hydro_114
Model size879
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.42e-84
EggNOG OGsCOG3868@1|root,2RCTR@2759|Eukaryota,39XS2@33154|Opisthokonta
DescriptionGlycoside-hydrolase family GH114
Cds size879
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789544.7979863-CDS-P-littoralis_Contig1247:48388..486341680789544.7979863-CDS-P-littoralis_Contig1247:48388..48634Pylaiella littoralis U1_48CDSP-littoralis_Contig1247 48389..48634 +
1680789544.8086805-CDS-P-littoralis_Contig1247:49136..493201680789544.8086805-CDS-P-littoralis_Contig1247:49136..49320Pylaiella littoralis U1_48CDSP-littoralis_Contig1247 49137..49320 +
1680789544.817799-CDS-P-littoralis_Contig1247:49376..494981680789544.817799-CDS-P-littoralis_Contig1247:49376..49498Pylaiella littoralis U1_48CDSP-littoralis_Contig1247 49377..49498 +
1680789544.8265553-CDS-P-littoralis_Contig1247:49735..498671680789544.8265553-CDS-P-littoralis_Contig1247:49735..49867Pylaiella littoralis U1_48CDSP-littoralis_Contig1247 49736..49867 +
1680789544.8376462-CDS-P-littoralis_Contig1247:50280..504751680789544.8376462-CDS-P-littoralis_Contig1247:50280..50475Pylaiella littoralis U1_48CDSP-littoralis_Contig1247 50281..50475 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1247.10.1prot_P-littoralis_Contig1247.10.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1247 48389..50475 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1247.10.1

>prot_P-littoralis_Contig1247.10.1 ID=prot_P-littoralis_Contig1247.10.1|Name=mRNA_P-littoralis_Contig1247.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=293bp
MVSYLPKGAPIPGADGEGSLHDVELYDIDYSYSSAVIADLQSKGKKVMCY
ISAGTSEDFRDDINLFPAEVKGGIVTFGEGDTFPDEAWLDLRRLDLVAPI
MLERMDIMKAKGCDAVEWDNADLPVHTVSLTDPLAPSFYGMRRERAVGMG
VVMKNNNEAAAFHVDDYDMVVNEECWINGNCVNYWAWAKARKPILNTEYF
TTRCMYCTQANLMEMSTIKKVPDLTTCRVDCKSGFDNTQCSDASISGVVS
YPIDWTVGTGAVMSEDWCPMTVNTDADECPSDRFATCDPDVS*
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mRNA from alignment at P-littoralis_Contig1247:48389..50475+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1247.10.1 ID=mRNA_P-littoralis_Contig1247.10.1|Name=mRNA_P-littoralis_Contig1247.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2087bp|location=Sequence derived from alignment at P-littoralis_Contig1247:48389..50475+ (Pylaiella littoralis U1_48)
ATGGTGTCTTACCTACCCAAAGGAGCGCCCATTCCCGGCGCTGACGGAGA AGGCTCGTTGCACGAtgTGGAACTGTACGACATCGACTACTCCTACTCTT CGGCTGTCATCGCCGATCTGCAGAGCAAAGGGAAGAAGGTCATGTGCTAC ATTTCCGCCGGCACGTCCGAAGACTTCCGCGACGATATCAACCTTTTCCC AGCAGAGGTCAAGGGTGGCATCGTGACGTTTGGTGAAGGCGATACTGTGA GTGCCGTATGAGGCGTTTGGTCCTTGGACAAAGTAAATGTAGTGGAGTCG AGACTACGTCAAGTTAGGAAGTCAGCCCGAAGGTCGTGCAGTTGCGGCAA GACATGAAATTTCATAGGGCGTGCCCGCAGGAGATGCATAAACGTTTGAC TTCGCAATCGTCAATACACTTCTCCCCGATTTCCAATCCTTCACGTCGTC TGAATTTTTCCTACTTGAGCTCAAGACGCAGCAGATTTGGCGGCTGACGC ATTCACAGTTTTTCATCAAATTTGAAGCCAATAGGGTCCGAGATTTGAAG TGGCAGTTTCTAGAGGGACGTTCGAAAGGGGAAACGGCAAGAGTTAGATT TCATTATGTGAACGCACACTTTTATAATTCTCACAAGCAAAAATCATTAC GTGGTCCGAATTTCCCTCATACTTGCAGGCTCCCCGTTATCTTACTTGAA CCCACGACCTTTTCTCCTGTGTGCGATTCCCTCTTTCGCTCCTCTCAGTT CCCCGACGAGGCTTGGCTGGACCTGCGTCGACTAGACCTGGTGGCTCCGA TCATGTTGGAGAGGATGGACATTATGAAGGCCAAGGGTTGCGATGCCGTA GAGTGGGACAACGCCGATCTTCCCGTTCACACCGTAAGTTTGACCGATCC ATTGGCACCGTCGTTTTACGGCATGCGAAgGGGTGAAAGGGCAGCACATA CAGTGAAAGACAAGCTTCGTGCTAATAAAAGGCTCTAGAACGCGCAGTCG GCATGGGGGTGGTCATGAAGAATAACAACGAGGCTGCGGCATTCCATGTG GACGATTACGACATGGTGGTCAACGAAGAGTGCTGGATCAACGGAAACTG CGTCAACTACGTACGTCACCAGCTTGCAGTATTTACCTGGTCATGCTTCT CGACCATTGCGTGACGATGGGATAGAAGTATGCAACGCGATCACCACCAT CAAATTATCAAGTTTAACCTCCCTGCCTCCTGGCACCAAGCGTCGTCATT CCTATTATCGTACATAGGAACAgGGTGCCATCATGACGCGCTTTCTTGTC ACGGATTCTCTAACCTCGACGCCGCTGTTGTGCATGCTTTGCTTCAGTGG GCGTGGGCCAAGGCCCGCAAGCCGATTCTCAACACCGAGTACTTTACTAC CAGATGCATGTACTGCACTCAGGCCAACCTCATGGAAATGTCGACCATCA AGAAGGTTCCCGACCTCACCACTTGCAGGGTGAGCCTCTCAGTCTTTAGT GCAGTCGCAGAAAGTTGGTCTGCGTGTGACGTTGTACATGTCGTTGCACC GATAAGCTCACAGATGCTCAAGCAAGCCACCAAGTTTCGGTGAGAGTGCC GGTAGCACCATCCCACACACCGTCCTGCGGCGCATGATGAAGCGCATCGG CCTCCATCACCATATCTTGCGAACGGGCTCCTGTACTCACCACGGCTGGT TGCGAAGAGGTCGCAAGTATTGAAGGCCCTCCTCAAAGGCACCATCGCCC CTGAATATTTGTGGCGGGGCTCATGAGCCGTCCGTCCCGACGCTCTGACC GTCAGCTCATGAGCTTCCGCAACGTTCAGTCGTACCGTAAGGGTGTCAAA ACCGTTCTCCTTTGACTTTTCTCTCATCCAATTATCTCCCAGGTGGACTG TAAGTCAGGTTTCGACAACACCCAGTGCAGCGACGCCTCGATCAGTGGTG TCGTGTCCTACCCGATCGACTGGACGGTCGGTACTGGCGCTGTCATGAGT GAGGACTGGTGCCCCATGACCGTCAACACTGATGCCGACGAGTGCCCCAG CGACAGATTCGCCACGTGCGATCCCGATGTGAGTTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1247:48389..50475+

>mRNA_P-littoralis_Contig1247.10.1 ID=mRNA_P-littoralis_Contig1247.10.1|Name=mRNA_P-littoralis_Contig1247.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=879bp|location=Sequence derived from alignment at P-littoralis_Contig1247:48389..50475+ (Pylaiella littoralis U1_48)
ATGGTGTCTTACCTACCCAAAGGAGCGCCCATTCCCGGCGCTGACGGAGA
AGGCTCGTTGCACGAtgTGGAACTGTACGACATCGACTACTCCTACTCTT
CGGCTGTCATCGCCGATCTGCAGAGCAAAGGGAAGAAGGTCATGTGCTAC
ATTTCCGCCGGCACGTCCGAAGACTTCCGCGACGATATCAACCTTTTCCC
AGCAGAGGTCAAGGGTGGCATCGTGACGTTTGGTGAAGGCGATACTTTCC
CCGACGAGGCTTGGCTGGACCTGCGTCGACTAGACCTGGTGGCTCCGATC
ATGTTGGAGAGGATGGACATTATGAAGGCCAAGGGTTGCGATGCCGTAGA
GTGGGACAACGCCGATCTTCCCGTTCACACCGTAAGTTTGACCGATCCAT
TGGCACCGTCGTTTTACGGCATGCGAAgGGAACGCGCAGTCGGCATGGGG
GTGGTCATGAAGAATAACAACGAGGCTGCGGCATTCCATGTGGACGATTA
CGACATGGTGGTCAACGAAGAGTGCTGGATCAACGGAAACTGCGTCAACT
ACTGGGCGTGGGCCAAGGCCCGCAAGCCGATTCTCAACACCGAGTACTTT
ACTACCAGATGCATGTACTGCACTCAGGCCAACCTCATGGAAATGTCGAC
CATCAAGAAGGTTCCCGACCTCACCACTTGCAGGGTGGACTGTAAGTCAG
GTTTCGACAACACCCAGTGCAGCGACGCCTCGATCAGTGGTGTCGTGTCC
TACCCGATCGACTGGACGGTCGGTACTGGCGCTGTCATGAGTGAGGACTG
GTGCCCCATGACCGTCAACACTGATGCCGACGAGTGCCCCAGCGACAGAT
TCGCCACGTGCGATCCCGATGTGAGTTGA
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