prot_P-littoralis_Contig1245.4.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1245.4.2
Unique Nameprot_P-littoralis_Contig1245.4.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length247
Homology
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5K7K1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K1_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 3.670e-59
Identity = 97/161 (60.25%), Postives = 120/161 (74.53%), Query Frame = 0
Query:   91 GEARASSLVASGGEGGEDTEPDRQGESD----TRRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 247
            GE+R  +L   G     D   +  G  D    +RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYSV SLL RLP TLS+++LSL RKWAR+SWL++ AY+ GL+GY+Q RD+KKWT+HRS TD  D VL
Sbjct:  307 GESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVTLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 467          
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 2.250e-57
Identity = 97/161 (60.25%), Postives = 120/161 (74.53%), Query Frame = 0
Query:   91 GEARASSLVASGGEGGEDTEPDRQGESD----TRRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 247
            GE+R  +L   G     D   +  G  D    +RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAI+R WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWL++ AY+ GL+GY+Q RD+KKWT+HRS TD  D VL
Sbjct:  500 GESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 660          
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 1.130e-56
Identity = 98/161 (60.87%), Postives = 120/161 (74.53%), Query Frame = 0
Query:   91 GEARASSLVASGGEGGEDTEPDRQGESD----TRRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 247
            GE+R  +L   G     D   +  G  D    +RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWL++ AY+ GL+GY+Q RD+KKWT+HRS TD  D VL
Sbjct:  948 GESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 1108          
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5JR66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR66_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 6.290e-45
Identity = 75/147 (51.02%), Postives = 102/147 (69.39%), Query Frame = 0
Query:  102 GGEGGEDTEPDRQGESDTRR-CCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 247
            GGE G        GE+  RR CC+  VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R  C+YS++ +L+ LP  LS +    IR W+R++WL++EAY  GL+ Y++YRD+K+W  HR +T R DAV+
Sbjct:  152 GGEDGASVGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKYLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 298          
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5KWI8_9PHAE (Uncharacterized protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI8_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 2.390e-44
Identity = 69/128 (53.91%), Postives = 95/128 (74.22%), Query Frame = 0
Query:  120 RRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 247
            RRCC+  VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R  C+YS++ +L+ LP  LS +    IR W+R++WL++EAY  GL+ Y++YRD+K+W  HR +T R DAV+
Sbjct:  108 RRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRVWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 235          
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5KKI5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI5_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 2.550e-44
Identity = 73/147 (49.66%), Postives = 101/147 (68.71%), Query Frame = 0
Query:  102 GGEGGEDTEPDRQGESDTRR-CCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 247
            GGE G+ +     GE+  RR CC+  VLS L AF+E+ N VE +F+A GH CIFLPKYHPE NAIER WG+ K + R  C+YS++ +L+ LP  LS +    IR W+R++WL++EAY  GL+ Y++  D+K+W  HR +T R DAV+
Sbjct:   55 GGEDGDSSGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVENLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLECCDLKEWGKHREATARGDAVI 201          
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5LC28_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC28_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 2.800e-44
Identity = 69/128 (53.91%), Postives = 95/128 (74.22%), Query Frame = 0
Query:  120 RRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 247
            RRCC+  VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R  C+YS++ +L+ LP  LS +    IR W+R++WL++EAY  GL+ Y++YRD+K+W  HR +T R DAV+
Sbjct:  108 RRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 235          
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5K4S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S4_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 2.870e-44
Identity = 87/204 (42.65%), Postives = 122/204 (59.80%), Query Frame = 0
Query:   58 LWVV--QAPRRKEGAEACVQKVYRRGESLGGAEETGEARASSLVASGGE----GGEDTEPDRQGESDT--------RRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 247
            LW V  QAP R    +AC ++      ++      GEAR  +L  +  E    GG+   P+   E           RRCC+R V + L AFK + N++E+MF+ AGH CIFL KYHPE NAIER WG+ K + R  C+YS+  +L+ LP  LS + L  +R W+R++WL++EAY  GL  Y++ RD+KKW SHRS T+R D+V+
Sbjct:   47 LWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGDSVV 250          
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 5.910e-44
Identity = 80/134 (59.70%), Postives = 98/134 (73.13%), Query Frame = 0
Query:   91 GEARASSLVASGGEGGEDTEPDRQGESD----TRRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATG 220
            GE+R  +L   G     D   +  G  D    +RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWL++ AY+ G
Sbjct:  383 GESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHG 516          
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5KXM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM8_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.220e-43
Identity = 69/128 (53.91%), Postives = 95/128 (74.22%), Query Frame = 0
Query:  120 RRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 247
            RRCC+  VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R  C+YS++ +L+ LP  LS +    IR W+R++WL++EAY  GL+ Y++YRD+K+W  HR +T R DAV+
Sbjct:  192 RRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 319          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7K1_9PHAE3.670e-5960.25Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K2M3_9PHAE2.250e-5760.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7W4_9PHAE1.130e-5660.87Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR66_9PHAE6.290e-4551.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWI8_9PHAE2.390e-4453.91Uncharacterized protein n=18 Tax=Ectocarpus sp. CC... [more]
A0A6H5KKI5_9PHAE2.550e-4449.66Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5LC28_9PHAE2.800e-4453.91Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4S4_9PHAE2.870e-4442.65Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K344_9PHAE5.910e-4459.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXM8_9PHAE1.220e-4353.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 117..227
e-value: 1.6E-8
score: 36.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1245contigP-littoralis_Contig1245:16467..17838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1245.4.2mRNA_P-littoralis_Contig1245.4.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig1245 16467..17838 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1245.4.2 ID=prot_P-littoralis_Contig1245.4.2|Name=mRNA_P-littoralis_Contig1245.4.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=247bp
RQLHRACSLQPRCLEGAKRPRRRGGSADIQEGRQGHAGRESVEMSRTRQR
SEGAFTRLWVVQAPRRKEGAEACVQKVYRRGESLGGAEETGEARASSLVA
SGGEGGEDTEPDRQGESDTRRCCLRFVLSNLPAFKEQKNRVEEMFEAAGH
RCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSL
SLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf