mRNA_P-littoralis_Contig1245.4.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5K7K1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K1_9PHAE) HSP 1 Score: 203 bits (517), Expect = 3.670e-59 Identity = 97/161 (60.25%), Postives = 120/161 (74.53%), Query Frame = 1
Query: 271 GEARASSLVASGGEGGEDTEPDRQGESD----TRRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 741
GE+R +L G D + G D +RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYSV SLL RLP TLS+++LSL RKWAR+SWL++ AY+ GL+GY+Q RD+KKWT+HRS TD D VL
Sbjct: 307 GESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVTLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 467
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE) HSP 1 Score: 203 bits (517), Expect = 2.250e-57 Identity = 97/161 (60.25%), Postives = 120/161 (74.53%), Query Frame = 1
Query: 271 GEARASSLVASGGEGGEDTEPDRQGESD----TRRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 741
GE+R +L G D + G D +RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAI+R WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWL++ AY+ GL+GY+Q RD+KKWT+HRS TD D VL
Sbjct: 500 GESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 660
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE) HSP 1 Score: 204 bits (520), Expect = 1.130e-56 Identity = 98/161 (60.87%), Postives = 120/161 (74.53%), Query Frame = 1
Query: 271 GEARASSLVASGGEGGEDTEPDRQGESD----TRRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 741
GE+R +L G D + G D +RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWL++ AY+ GL+GY+Q RD+KKWT+HRS TD D VL
Sbjct: 948 GESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 1108
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5JR66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR66_9PHAE) HSP 1 Score: 162 bits (411), Expect = 6.290e-45 Identity = 75/147 (51.02%), Postives = 102/147 (69.39%), Query Frame = 1
Query: 304 GGEGGEDTEPDRQGESDTRR-CCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 741
GGE G GE+ RR CC+ VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WL++EAY GL+ Y++YRD+K+W HR +T R DAV+
Sbjct: 152 GGEDGASVGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKYLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 298
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5KWI8_9PHAE (Uncharacterized protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI8_9PHAE) HSP 1 Score: 160 bits (405), Expect = 2.390e-44 Identity = 69/128 (53.91%), Postives = 95/128 (74.22%), Query Frame = 1
Query: 358 RRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 741
RRCC+ VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WL++EAY GL+ Y++YRD+K+W HR +T R DAV+
Sbjct: 108 RRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRVWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 235
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5KKI5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI5_9PHAE) HSP 1 Score: 157 bits (397), Expect = 2.550e-44 Identity = 73/147 (49.66%), Postives = 101/147 (68.71%), Query Frame = 1
Query: 304 GGEGGEDTEPDRQGESDTRR-CCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 741
GGE G+ + GE+ RR CC+ VLS L AF+E+ N VE +F+A GH CIFLPKYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WL++EAY GL+ Y++ D+K+W HR +T R DAV+
Sbjct: 55 GGEDGDSSGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVENLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLECCDLKEWGKHREATARGDAVI 201
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5LC28_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC28_9PHAE) HSP 1 Score: 160 bits (406), Expect = 2.800e-44 Identity = 69/128 (53.91%), Postives = 95/128 (74.22%), Query Frame = 1
Query: 358 RRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 741
RRCC+ VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WL++EAY GL+ Y++YRD+K+W HR +T R DAV+
Sbjct: 108 RRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 235
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5K4S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S4_9PHAE) HSP 1 Score: 160 bits (406), Expect = 2.870e-44 Identity = 87/204 (42.65%), Postives = 122/204 (59.80%), Query Frame = 1
Query: 172 LWVV--QAPRRKEGAEACVQKVYRRGESLGGAEETGEARASSLVASGGE----GGEDTEPDRQGESDT--------RRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 741
LW V QAP R +AC ++ ++ GEAR +L + E GG+ P+ E RRCC+R V + L AFK + N++E+MF+ AGH CIFL KYHPE NAIER WG+ K + R C+YS+ +L+ LP LS + L +R W+R++WL++EAY GL Y++ RD+KKW SHRS T+R D+V+
Sbjct: 47 LWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGDSVV 250
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE) HSP 1 Score: 164 bits (415), Expect = 5.910e-44 Identity = 80/134 (59.70%), Postives = 98/134 (73.13%), Query Frame = 1
Query: 271 GEARASSLVASGGEGGEDTEPDRQGESD----TRRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATG 660
GE+R +L G D + G D +RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYSV SLL RLP TLS++SLSL RKWAR+SWL++ AY+ G
Sbjct: 383 GESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHG 516
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Match: A0A6H5KXM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM8_9PHAE) HSP 1 Score: 160 bits (406), Expect = 1.220e-43 Identity = 69/128 (53.91%), Postives = 95/128 (74.22%), Query Frame = 1
Query: 358 RRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSVKSLLKRLPATLSSMSLSLIRKWARISWLFVEAYATGLDGYMQYRDIKKWTSHRSSTDRVDAVL 741
RRCC+ VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WL++EAY GL+ Y++YRD+K+W HR +T R DAV+
Sbjct: 192 RRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 319 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1245.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1245.4.2 >prot_P-littoralis_Contig1245.4.2 ID=prot_P-littoralis_Contig1245.4.2|Name=mRNA_P-littoralis_Contig1245.4.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=247bp RQLHRACSLQPRCLEGAKRPRRRGGSADIQEGRQGHAGRESVEMSRTRQRback to top mRNA from alignment at P-littoralis_Contig1245:16467..17838- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1245.4.2 ID=mRNA_P-littoralis_Contig1245.4.2|Name=mRNA_P-littoralis_Contig1245.4.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1372bp|location=Sequence derived from alignment at P-littoralis_Contig1245:16467..17838- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1245:16467..17838- >mRNA_P-littoralis_Contig1245.4.2 ID=mRNA_P-littoralis_Contig1245.4.2|Name=mRNA_P-littoralis_Contig1245.4.2|organism=Pylaiella littoralis U1_48|type=CDS|length=741bp|location=Sequence derived from alignment at P-littoralis_Contig1245:16467..17838- (Pylaiella littoralis U1_48)back to top |