prot_P-littoralis_Contig1245.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1245.3.1
Unique Nameprot_P-littoralis_Contig1245.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length86
Homology
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BLAST of mRNA_P-littoralis_Contig1245.3.1 vs. uniprot
Match: D8LMX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX9_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 2.460e-21
Identity = 47/85 (55.29%), Postives = 58/85 (68.24%), Query Frame = 0 
Query:    1 MSKPATRINVLSTTGLVVIEGGYGLRDKIKQEGGRFQPSAVGDIVAAKSWVIKTLNDSDARTLAKFLKKSARSAGLEAQVCPTFY 85
            M   AT INVL+TTG+V IE GY +   IK+ GG F+P  VGD+V  KSW++K   D  ART+AK LKKSARS+GL AQ    F+
Sbjct:    1 MESRATIINVLNTTGIVTIERGYEILADIKKVGGFFRPQPVGDVVEPKSWIVKARTDERARTIAKQLKKSARSSGLHAQDTRGFF 85
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1245.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMX9_ECTSI2.460e-2155.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1245contigP-littoralis_Contig1245:11128..11731 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1245.3.1mRNA_P-littoralis_Contig1245.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1245 11128..11731 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1245.3.1 ID=prot_P-littoralis_Contig1245.3.1|Name=mRNA_P-littoralis_Contig1245.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=86bp
MSKPATRINVLSTTGLVVIEGGYGLRDKIKQEGGRFQPSAVGDIVAAKSW
VIKTLNDSDARTLAKFLKKSARSAGLEAQVCPTFY*
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