mRNA_P-littoralis_Contig124.65.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig124.65.1 vs. uniprot
Match: D7FWC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC4_ECTSI) HSP 1 Score: 427 bits (1099), Expect = 1.280e-129 Identity = 399/1046 (38.15%), Postives = 491/1046 (46.94%), Query Frame = 1
Query: 91 RQSRLKPGTASGASVLPECDKHQAGDRVEARFGGRSKWFPGKVRRTHGGVTGKVLYDIDFDDGDKEEGVLASRVRSPGQTPPALQAGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSEWSLPVQQVIPGYPFTPPPSTTVLRGSSAGTNSDTAAIPESPGETNASRDPDKIDEQRGTAGGTPRRRCSNPPTSAFVRGGDFPGQQAETGSTTP-----EASSSTQPPVDQQNKQLGEQPKTG--ENGGGGSGLSWIAEVADXXXXXXXXXXXXXXXXXXXXXXXXXX---------------GLDWVAEPMSPLGWPDPRESTAS----IAESNPPMPNPNHGRGFSLSPTVGPTTNIPAGATGAEAGVPTTPVTMRQKRPPLAQTPPHLEWKPIKDGSANRTWGAPPLDEEDMVTDEKQASKGGHGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSNAPTSSLSPHRQQDVAVAPDGNPGDRPDTTPAGLPDKQIEPAAGDAQLRSGGEDKKTAEVAGGVLLGVEEAVGNENNTPPADAATAGDKSTLRGEQQD-------LPSSGASAQGERERRLVAPTERPGESQNKLTPRAEKVSPAPGQGGSSGSSSTRWAILRSSVQRRYAAEAMHAAEEVRLLAAKLKAGDDKMRERLEQQERKLVGQMEEALQRELDKVHTLWKEERAASARRISSLKEDLDTANRRLESERNRNTKARDRKKESRCLGGSDTRSSPEITHHLPHLEGRN---------------GPEISP---RCSRSNSNATAXXXXXXXXXXTTPWGRAARSTGNRLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR---QETPETVLKPDAAVLAGRVAPAVVVDPCFSINAELSAVDGGL---------------TGRRETAVDCSRIGCRHREESLRWKLETERRDTRRRLEAMKGEVERVVGQFQMRAERAEATAASAEKRAAVKALRYLRSKRSP 3021
RQSRLKP +S + ++Q D VEARFGGRSKWFPGKVRR + G G++LYD+DFDDGD+EEGVLA RVR PGQ PPAL+AGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSEWSLP QQ IP YP+TP + G++ G + + E + + D D+Q G +PR ++ P S+ R + G QA ST +SSS ++Q+ ++ GSG+SWIA++A GLDW+ E +SPL P RES++S AE PP+ N LSP P T PA A + G P+TPV + RPP A TP HLEWKPI DGSA R WGAPP + V +K SKGG T +AP +L +Q+ A N G + + A + A RSGG T VAGG G E ++ NT + A+ G + G QD +A E + A PG P +K A GQ GSS RW I+RSSVQRRYAAEAMH +EEVRLL AKL A +DK + RL QQERKLV QM+E L+RE DK+ L EERA+SARRI++LK ++D A R+LE ER R+ KA ++ L G ++SP + H + GR P+ S R RS+S+A T PWG + R G R P XXX + TV +P ++ D E S +G RE AV HRE++ RW+LETERRDTRRRLEAMKGEVERVVGQF+ RAERAEA AASAE+RA VKALRYLRSKRSP
Sbjct: 28 RQSRLKPKHSSETPEPQDDGRYQPHDTVEARFGGRSKWFPGKVRRAYEGREGRLLYDVDFDDGDEEEGVLAGRVRRPGQGPPALRAGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSEWSLPAQQAIPIYPYTPS-----VGGTNTGASDGQVEARAARDENSRAEPHDDADDQLGPNSTSPRAAENDQPASSD-RSNNTRGHQASAASTASGPLPLSSSSSFDGGAEKQSXXXXXXXXXXXXKSDQSGSGISWIADLAKSVETPTPAAQLPDPAARTDAGGKRSEAGDDSGNRGXXXXXSGLDWITELVSPLAQPSARESSSSGGEASAERGPPVATGN------LSPV--PITQTPAVA--PDRG-PSTPVATKS-RPPRAVTPSHLEWKPITDGSAKRRWGAPPPE----VDADK--SKGGEETKTQQRQQLPNSPPRLSRSTAAPDSTRSLSTDAAPLADAPASRSATRVSAPKIALPAGQQEPKAKT---NVGGESNASIASTDTIASQGA------RSGGRPP-TVPVAGGRTPGPEVRERDDANTQHSCDASGGATAENLGGSQDNQGTEMHATQQEGAASFESSGSVNATVPLPGGGAQIALPSVQKKGVAEGQSVRGGSS--RWDIIRSSVQRRYAAEAMHLSEEVRLLTAKLAAAEDKTQARLVQQERKLVRQMDEVLKRERDKMQALLSEERASSARRINTLKGEVDAARRQLELERRRSEKAASTGGQA-ILSGRRAKTSPPLHHTTGSVRGREKTRGTVSSYEPAHCEAPDRSASTVRRPRSSSSARVSR--------TGPWGLSDRDAGRRCPPXXXLSLATTCPDSGRKASSAASASEGARRTIFSERLGHTSSSVLSPLSCGGSGGGGSDGKGVEYLALENILRNVLATVAEPSSSXXXXXXXXXRKRD---GEQEERSGSEGEAFEELAPPPPRQRERAPAHRERAVSDG-----HREQASRWRLETERRDTRRRLEAMKGEVERVVGQFRARAERAEAAAASAEQRAKVKALRYLRSKRSP 1020
BLAST of mRNA_P-littoralis_Contig124.65.1 vs. uniprot
Match: A0A6H5K1V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V4_9PHAE) HSP 1 Score: 388 bits (997), Expect = 1.420e-114 Identity = 400/1084 (36.90%), Postives = 488/1084 (45.02%), Query Frame = 1
Query: 91 RQSRLKPGTASGASVLPECDKHQAGDRVEARFGGRSKWFPGKVRRTHGGVTGKVLYDIDFDDGDKEEGVLASRVRSPGQTPPALQAGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSEWSLPVQQVIPGYPFTPPPSTTVLRGSSAGTNSDTAAIPESPGETNASRDP-DKIDEQRGTAGGTPRRRCSNPPTSAFVRGGDFPGQQAETGSTTPEASSSTQPP--VDQQNKQLGEQPKTGENGG--GGSGLSWIAEVADXXXXXXXXXXXXXXXXXXXXXXXXXX---------------GLDWVAEPMSPLGWPDPRESTAS----IAESNPPMPNPNHGRGFSLSPTVGPTTNIPAGATGAEAGVPTTPVTMRQKRPPLAQTPPHLEWKPIKDGSANRTWGAPPLD-EEDMVTDEKQASKGGHGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSNAPTSSLSPHRQQDVAVAPDGNPGDRPDTTPAGLPDKQIEPAA--GDAQLRSGGEDKKTAEVAGGVLLGVEEAVGNENNTPPADAATAGDKSTLRGEQQDLPSSGASAQGER-------ERRLVAPTERPGESQNKLTPRAEKVSPAPGQGGSSGSSSTRWAILRSSVQRRYAAEAMHAAEEVRLLAAKLKAGDDKMRERLEQQERKLVGQMEEALQRELDKVHTLWKEERAASARRISSLKEDLDTANRRLESERNRNTKAR-----------------------DRKKESRC-------------------LGGSDTRSSPE-----------------ITHHLPHLEGRNGPEISPRCSRSNSNATAXXXXXXXXXXTTPWGRAARSTGNRLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQETPETVLKPDAAVLAGRVAPAVVVDPCFSINAELSAVDGGLTG-------------RRETAVDCSRIGCRHREESLRWKLETERRDTRRRLEAMKGEVERVVGQFQMRAERAEATAASAEKRAAVKALRYLRSKRSPS 3024
RQ+RLKP +S E +++ D VEARFGGRSKWFPGKVRR + G G++LYD+DFDDGD+EEGVLA RVR PGQ PP+L AGLVVD+KLARKGKGYHP TIGRVNDDGSLYVKLDDGDSEWSLP QQ IP YP+TPP L ++AG + A PES + N +P D D+Q G +PR PP ++Q+ Q ++ E GSG+SWIA++A GLDW+ E +SPL P RES++S AE PP+ N LSP P T PA A G P+TP+ + PP A PPHLEWKPI DGSA R WGAPP + + D D K+ P++AP SS + P G + T + + I A RSGG T VAGG G E ++ NT + A++G + G QD + A ++ + A P E P +K GQ GSS RW I+RSSVQRR+AAEAMH +EEVRLL A+L A +DK + RL QQERKLV QM+E L+RE DK+ L EERA+SARRI++LK ++D A R+LE ER R+ K R +R+ L G R+SP +T + P E + R RS S+A T PWG + R R P XXXXXXXXXXXXXXXXXXXXXX + VL A + + R A + HRE+S RW+LETERRDTRRRLEAMKGEVERVVGQF+ RAERAEA AASAE+RA VKALRYLRSKRSPS
Sbjct: 28 RQTRLKPRHSSETPKPQEDGRYRPQDAVEARFGGRSKWFPGKVRRAYEGREGRLLYDVDFDDGDEEEGVLAGRVRRPGQRPPSLSAGLVVDIKLARKGKGYHPATIGRVNDDGSLYVKLDDGDSEWSLPAQQAIPIYPYTPP-----LDKTNAGASDGQLAAPESARDENNRAEPHDDADDQIGPNSTSPRAAEDVPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKQSGQNSDKNXXAEEKSDQSGSGVSWIADLAKSVETPTPVAQLSDSAARTDAGGKRSEAGDDSGNRDGGGGGSGLDWITELVSPLAQPSARESSSSGGEASAEGGPPVAVGN------LSPV--PITQTPAFARGHG---PSTPLATKTP-PPRAVKPPHLEWKPITDGSAKRRWGAPPPEVDADKSKDGKETEP------------------QQRQQLPNSPPRLSRSTAAPDSTRSLSTDAAPPADAPASSSAARASAPKIALPAGQREPKATTNVSDEGNASITSTATISSQGARSGGRPS-TVPVAGGRTPGPEVREHDDTNTQQSCDASSGATAENLGGLQDNQGTEMLATQQKGFASFQSSGSVNATVLPPAEGAQIALPPVQKKGVPEGQSVRGGSS--RWDIIRSSVQRRFAAEAMHLSEEVRLLTAQLAAAEDKTQARLVQQERKLVRQMDEVLKRERDKMQALLSEERASSARRINALKGEVDAARRQLELERRRSEKVRTGTLTTITQKMCRLQPIDQAFGQERRFPGHAPESTTTRSLRATSSGGQAFLSGRRARTSPPLDPTTGSVRGREKTRGTVTSYDPAHEAPGRSASTMRRPRSTSSARVSR--------TGPWGLSDRDAERRHPPXXXXXXXXXXXXXXXXXXXXXXASEGARRTISSERLGHTSPSLLSPLSCGGSDGGGGSDGKGVDYLALENILRNVLATVAEPSSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRERGPAHTERAVSDGHREQSSRWRLETERRDTRRRLEAMKGEVERVVGQFRARAERAEAAAASAEQRAKVKALRYLRSKRSPS 1065
BLAST of mRNA_P-littoralis_Contig124.65.1 vs. uniprot
Match: A0A1V9YSA0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YSA0_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 9.150e-14 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1
Query: 100 RLKPGTASGASVLPECDKHQAGDRVEARFGGRSKWFPGKVRRTHGGVTGKVLYDIDFDDGDKEEGVLASRVRSPGQTPPALQAGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSE 465
RL PG A V + + G +VEA++ G+SK +PG + + H T YDID+DDG+KE V +R +PP ++ + V+ KGK ++PG I +V+ DG+ V DDG+ E
Sbjct: 68 RLVPGATDDAEV-----RLRVGSKVEAKYKGKSKLYPGTIAKVHSNGT----YDIDYDDGEKETNVAKELIRGSEGSPPKVRLKIGAKVEAKYKGKTFYPGKIAKVHSDGTCDVDYDDGEVE 180
BLAST of mRNA_P-littoralis_Contig124.65.1 vs. uniprot
Match: A0A835ZLF8_9STRA (Tudor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLF8_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 7.450e-13 Identity = 47/105 (44.76%), Postives = 59/105 (56.19%), Query Frame = 1
Query: 163 GDRVEARFGGRSKWFPGKVRRTHGGVTGKVLYDIDFDDGDKEEGVLASRVRSPGQTPPALQAGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSEWSLP 477
G VEARFGGR++WFPG V H + Y DGD+EE V RVR PG P L+AG VDV R G G + R N DG++YV DG+ +W++P
Sbjct: 175 GMAVEARFGGRARWFPGTVTAVHADGACAIAYA----DGDREERVPRRRVRLPGDAPAPLRAGNAVDV--VRAGGRCAAGAVRRDNGDGTVYVAFKDGEVDWAVP 273
BLAST of mRNA_P-littoralis_Contig124.65.1 vs. uniprot
Match: A0A067CHD7_SAPPC (SGF29 C-terminal domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CHD7_SAPPC) HSP 1 Score: 82.8 bits (203), Expect = 1.290e-12 Identity = 55/135 (40.74%), Postives = 73/135 (54.07%), Query Frame = 1
Query: 94 QSRLKPGTASGASVLPECDKHQAGDRVEARFGGRSKWFPGKVRRTHGGVTGKVLYDIDFDDGDKEEGVLASRVRS-PGQTPPALQAGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSEWSLPVQQVIP 495
++ +KP T A+ + K GD VEARFGG+ K+F GK+ HG + YDI++DDGD+E V + VR P + G VVD + KGK Y G I V+ DGSL V+ DDGD E + V P
Sbjct: 373 ETHVKPSTLQQAASVRPLTK---GDLVEARFGGKDKFFKGKITHVHGDGS----YDIEYDDGDEERRVDPALVRLLPTTKETKFKKGDVVDARFGGKGK-YFRGKITLVHGDGSLDVEYDDGDRETRVEAALVRP 499
BLAST of mRNA_P-littoralis_Contig124.65.1 vs. uniprot
Match: T0Q6A6_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q6A6_SAPDV) HSP 1 Score: 82.0 bits (201), Expect = 2.320e-12 Identity = 51/137 (37.23%), Postives = 71/137 (51.82%), Query Frame = 1
Query: 82 EKTRQSRLKPGTASGASVLPECDKHQAGDRVEARFGGRSKWFPGKVRRTHGGVTGKVLYDIDFDDGDKEEGVLASRVR---------SPGQTPPALQAGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSE 465
+K ++ P SG V G +VEAR+ G+SK++PGK+ + H T YDID+DDG+KE+ + +R S T L G V+ K KGK Y+PGTI +VNDD S + DDG+ E
Sbjct: 272 KKPSKTPSSPSKQSGLKV---------GTKVEARYKGKSKYYPGKIAKCHADET----YDIDYDDGEKEKRIERDLIRVVVTSSTKTSQHNTETDLVVGTKVEAKY--KGKTYYPGTIAKVNDDESYDIDYDDGEKE 393
BLAST of mRNA_P-littoralis_Contig124.65.1 vs. uniprot
Match: A0A2R5GDF6_9STRA (Cytidine deaminase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDF6_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.430e-12 Identity = 53/115 (46.09%), Postives = 66/115 (57.39%), Query Frame = 1
Query: 163 GDRVEARFGGRSKWFPGKVRRTHGGVTGKVLYDIDFDDGDKEEGVLASRVR------SPGQTPPALQAGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSEWSLPVQQV 489
GDRVEARF G SKW+ G+V R G G+ +DID+DDGDKE V ASRVR S Q AL G V+ + + G ++ G I RVN DGS + DDGD E + +V
Sbjct: 1041 GDRVEARFKGGSKWYKGRVTRV--GAGGRA-FDIDYDDGDKERSVPASRVRRLDSGSSRDQDDDALAEGDRVEARF-KGGSKWYKGKIVRVNADGSYNIDYDDGDQERRVAASKV 1151
BLAST of mRNA_P-littoralis_Contig124.65.1 vs. uniprot
Match: T0S0C4_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S0C4_SAPDV) HSP 1 Score: 81.3 bits (199), Expect = 8.740e-12 Identity = 49/117 (41.88%), Postives = 66/117 (56.41%), Query Frame = 1
Query: 151 KHQAGDRVEARFGGRSKWFPGKVRRTHGGVTGKVLYDIDFDDGDKEEGVLASRVRSPGQ--TPPALQAGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSEWSLPVQQVIP 495
K GD VEARFGG+ K+F GK+ HG + +DI++DDGD+E V + VR P + T P + G +V+ + K K Y G I V+ DGSL V+ DDGD E + V P
Sbjct: 1213 KWAKGDLVEARFGGKDKYFKGKITHVHGDDS----HDIEYDDGDEERRVDPALVRLPAKSSTKPQFKKGDLVEARFGGKDK-YFKGKIAHVHSDGSLDVEYDDGDRETRVAASLVRP 1324
BLAST of mRNA_P-littoralis_Contig124.65.1 vs. uniprot
Match: A0A1V9YV67_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YV67_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 9.750e-12 Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 1
Query: 127 ASVLPECDKH--QAGDRVEARFGGRSKWFPGKVRRTHGGVTGKVLYDIDFDDGDKEEGVLASRVRS-PGQTPPALQAGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSE 465
A+ + C K+ G RVEA++ +K++PGK+ + H T YDI+FDDGD + V AS VR ++ + + G V+ K KGK Y+PG I +VN DGS ++ DDG+SE
Sbjct: 116 AAKIRVCAKNLLPEGTRVEAKYKNTNKFYPGKITKVH---TSSGTYDIEFDDGDVDTKVQASDVRPIESKSTKSFKVGTEVEAKY--KGKTYYPGKIAKVNGDGSYDIEYDDGESE 226
BLAST of mRNA_P-littoralis_Contig124.65.1 vs. uniprot
Match: W2K2F5_PHYPR (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2K2F5_PHYPR) HSP 1 Score: 75.1 bits (183), Expect = 1.130e-11 Identity = 51/151 (33.77%), Postives = 70/151 (46.36%), Query Frame = 1
Query: 151 KHQAGDRVEARFGGRSKWFPGKVRRTHGGVTGKVLYDIDFDDGDKEEGVLASRVR------------------------------------SPGQTPPALQAGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSEWSLPVQQVIP 495
K + GD+VEA++ G+SK++PG + R T YDID+DDG+KE GV A +R PGQT + G V+ + K K Y GTI RVN DG+ ++ DDGD E +PV + P
Sbjct: 9 KFREGDKVEAQYKGKSKFYPGVISRCRLNGT----YDIDYDDGEKETGVAAELIRLLGKKGGGDTDDDSKQNFYVVSVKHESKAESKGAHVEPGQT---FRVGTRVEARYMGKDK-YFKGTISRVNSDGTYVIEYDDGDKENRVPVSSIRP 151 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig124.65.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig124.65.1 >prot_P-littoralis_Contig124.65.1 ID=prot_P-littoralis_Contig124.65.1|Name=mRNA_P-littoralis_Contig124.65.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1014bp DIDASLSSSSAGGSGGDDSNAAAAGGQEKTRQSRLKPGTASGASVLPECDback to top mRNA from alignment at P-littoralis_Contig124:378265..385591- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig124.65.1 ID=mRNA_P-littoralis_Contig124.65.1|Name=mRNA_P-littoralis_Contig124.65.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7327bp|location=Sequence derived from alignment at P-littoralis_Contig124:378265..385591- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig124:378265..385591- >mRNA_P-littoralis_Contig124.65.1 ID=mRNA_P-littoralis_Contig124.65.1|Name=mRNA_P-littoralis_Contig124.65.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3042bp|location=Sequence derived from alignment at P-littoralis_Contig124:378265..385591- (Pylaiella littoralis U1_48)back to top |