mRNA_P-littoralis_Contig124.53.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig124.53.1
Unique Name	mRNA_P-littoralis_Contig124.53.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig124.53.1 vs. uniprot
Match: D7FRS8_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS8_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 6.350e-46
Identity = 93/183 (50.82%), Postives = 126/183 (68.85%), Query Frame = 1

Query:  193 KQALFSVNGSIPEGAFCAIMALEDRGNSTLLSLLSGRRSKGRFAGKVLFEGAPVIDHQAGLPNSTLASFVRQSCYMRKDHAGFVQGLSVFDNLMFAAMLRAPGCLEDQAARVETVIEETGLESHRDVKASGLAVGLQRHLSVALELLSDRRILLLDQPLSGMTPHEALDFVKNVLRPLVGKKV 741
            +Q LFSV+GS+PEGA CAI+   D G S LL+LLSGR   GR  G+ LFEG  + + Q  +P++T    +    ++R+ H G++  LSVF+N+MFAAMLR PG LEDQ  +VETVI +T L+  RD +AS LA G +R LS+A+ELLSDRRILLLD   SG+  +E++  ++ VL+ L   KV
Sbjct:    6 QQQLFSVDGSVPEGALCAIIGPTDSGKSALLALLSGRPCMGRVEGRALFEGRLIEEQQ--MPSNTDRHSIG---FVRQGHTGYLAELSVFNNMMFAAMLRTPGSLEDQVTKVETVIGDTALDECRDTRASFLAAGEKRRLSLAVELLSDRRILLLDGVFSGLDTNESMVLME-VLKRLSRNKV 182

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BLAST of mRNA_P-littoralis_Contig124.53.1 vs. uniprot
Match: A0A177W9J7_BATDL (ABC transporter domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177W9J7_BATDL)

HSP 1 Score: 85.9 bits (211), Expect = 1.730e-15
Identity = 61/193 (31.61%), Postives = 98/193 (50.78%), Query Frame = 1

Query:  160 SMEISTEISAEKQALFSVNGSIPEGAFCAIMALEDRGNSTLLSLLSGRRSKGRFAGKVLFEGAPVIDHQAGLPNSTLASFVRQSC-YMRKDHAGFVQGLSVFDNLMFAAMLRAPGCL--EDQAARVETVIEETGLESHRDV-----KASGLAVGLQRHLSVALELLSDRRILLLDQPLSGMTPHEALDFVKNV 714
            S+   T+    K  +  + G +  G   AIM     G STLL+ L+GR   G+  G++L  G               AS  RQ C Y+ +D   F + LSV++ LM++A+LR P  +   ++  RVE VI   GL+  RD      +  G++ G ++ +S+ +EL++D  IL LD+P SG+    +L+ V  +
Sbjct:   28 SVADKTKKKEMKTLIQGMFGQVKAGEVVAIMGGSGAGKSTLLNTLAGRIGPGKLTGEILTNG-----------KKRNASTWRQQCAYVEQDDVVF-RNLSVYNTLMYSALLRLPSTMPRSEKEQRVENVIASLGLQGCRDTWIGDSEVRGISGGERKRVSIGIELVTDPDILFLDEPTSGLDAFNSLNIVSTI 208

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BLAST of mRNA_P-littoralis_Contig124.53.1 vs. uniprot
Match: A0A5B8MKW9_9CHLO (ATP-binding cassette transporter n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MKW9_9CHLO)

HSP 1 Score: 79.7 bits (195), Expect = 2.350e-13
Identity = 57/198 (28.79%), Postives = 103/198 (52.02%), Query Frame = 1

Query:  142 EEGDNPSMEISTEISAEKQALFSVNGSIPEGAFCAIMALEDRGNSTLLSLLSGRRSKGRFAGKVLFEGAPVIDHQAGLPNSTLASFVRQSCYMRKDHAGFVQGLSVFDNLMFAAMLRAPGCLE--DQAARVETVIEETGLESHRDVKASG-----LAVGLQRHLSVALELLSDRRILLLDQPLSGMTPHEALDFVKNV 714
            EEG  P++    +  A++  L  + G I  G+  A++     G ++LL ++SGR++ G  +G+VLF+G             T     R + Y+++  A  +   +VF+ ++F AML+ P  +   D+ +R   VIE+ GL    + K  G     ++ G  + +S+A+ L++D + L LD+P SG+    ALD ++ V
Sbjct:   57 EEGGWPTLCPRRKKRAKRHVLKGITGVIWPGSMYALLGPSGAGKTSLLDVISGRKTTGNISGQVLFDGK----------ERTSLRLKRDTAYVQQQDA-LLSSFTVFECIVFTAMLKLPKIMAYVDKRSRALEVIEKMGLFKAMNTKIGGPLNRGVSGGELKRVSIAIGLINDPQCLFLDEPTSGLDSAIALDVMEAV 243

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BLAST of mRNA_P-littoralis_Contig124.53.1 vs. uniprot
Match: UPI00038EC00A (ATP-binding cassette sub-family G member 2-like isoform X2 n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=UPI00038EC00A)

HSP 1 Score: 78.6 bits (192), Expect = 5.120e-13
Identity = 62/180 (34.44%), Postives = 95/180 (52.78%), Query Frame = 1

Query:  193 KQALFSVNGSIPEGAFCAIMALEDRGNSTLLSLLSGRRSKGRFAGKVLFEGAPVIDHQAGLPNSTLASFVRQSCYMRKDHAGFVQGLSVFDNLMFAAMLRAPGCL-EDQAARVETVIEETGLESHRDVKASGLAVGLQRHLSVALELLSDRRILLLDQPLSGMTP---HEALDFVKNVLR 720
            K  L +V+G +  G   AIM     G S LL +L+GR+     +G VL +G P             A F   S Y+ KD    +  L+V ++L F+A LR P    E++  R+E +IE+ GL++  D K   L+ G ++  SVA+EL++D RIL LD+P +G+ P   H  +  +K + R
Sbjct:   56 KDILSNVSGIMRPG-LNAIMGPSGGGKSVLLDVLAGRKDPRGLSGDVLIDGEPPP-----------ADFKCNSGYVVKDDVVLIT-LTVREHLQFSAALRLPRMSNEEKNKRIENIIEKLGLKNVADSKV--LSKGERKRTSVAVELITDPRILFLDEPTTGLDPSTAHAVISHLKEMSR 220

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BLAST of mRNA_P-littoralis_Contig124.53.1 vs. uniprot
Match: A0A0Q8BDV6_9HYPH (ABC transporter ATP-binding protein n=3 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A0Q8BDV6_9HYPH)

HSP 1 Score: 76.3 bits (186), Expect = 7.170e-13
Identity = 57/186 (30.65%), Postives = 95/186 (51.08%), Query Frame = 1

Query:  199 ALFSVNGSIPEGAFCAIMALEDRGNSTLLSLLSGRRSKGRFAGKVLFEGAPVIDHQAGLPNSTLASFVRQSCYMRKDHAGFVQGLSVFDNLMFAAMLRAPGCLEDQAA-----------RVETVIEETGLESHRDVKASGLAVGLQRHLSVALELLSDRRILLLDQPLSGMTPHEA---LDFVKNV 714
            AL  V+  + EG   AI+     G STLL++  GR    R  G+V+F+G  + +HQ    N    S V Q+  +  D       LS+ +N+M  A  +  G     A+           + E  +E+ GL++ R+V+A  L+ G +R L +A+ L+ + R+LLLD+P +GM+ H+    +D +K +
Sbjct:   22 ALADVDLQVEEGTVHAIIGPNGAGKSTLLNVCVGRIKPDR--GQVVFDGQALNNHQPHQINQLGVSRVFQTPEIFAD-------LSLLENVMIPAFAKRDGAFRFNASSPVAKQKDIREKAEAALEDVGLQNRRNVEAGSLSRGDKRRLELAMCLVQNPRLLLLDEPTAGMSRHDTNSTIDLLKRI 198

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BLAST of mRNA_P-littoralis_Contig124.53.1 vs. uniprot
Match: UPI00038EF41A (ATP-binding cassette sub-family G member 2-like isoform X1 n=3 Tax=Chinchilla lanigera TaxID=34839 RepID=UPI00038EF41A)

HSP 1 Score: 78.2 bits (191), Expect = 7.610e-13
Identity = 62/180 (34.44%), Postives = 96/180 (53.33%), Query Frame = 1

Query:  193 KQALFSVNGSIPEGAFCAIMALEDRGNSTLLSLLSGRRSKGRFAGKVLFEGAPVIDHQAGLPNSTLASFVRQSCYMRKDHAGFVQGLSVFDNLMFAAMLRAPGCL-EDQAARVETVIEETGLESHRDVKASGLAVGLQRHLSVALELLSDRRILLLDQPLSGMTP---HEALDFVKNVLR 720
            K+ L +V+G +  G   AIM     G S LL +L+GR+     +G VL +G P             A F   S Y+ KD    +  L+V ++L F+A LR P    E++  R+E +IE+ GL++  D K   L+ G ++  SVA+EL++D RIL LD+P +G+ P   H  +  +K + R
Sbjct:   56 KEILSNVSGIMRPG-LNAIMGPTAGGKSVLLDVLAGRKDPRGLSGDVLIDGEPPP-----------ADFKCNSGYVVKDDVVLIT-LTVREHLQFSAALRLPRMSNEEKNKRIENIIEKLGLKNVADSKV--LSKGERKRTSVAVELITDPRILFLDEPTTGLDPSTAHAVVSHLKEMSR 220

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BLAST of mRNA_P-littoralis_Contig124.53.1 vs. uniprot
Match: K8EFD1_9CHLO (ABC transporter family protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EFD1_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 1.920e-12
Identity = 59/181 (32.60%), Postives = 95/181 (52.49%), Query Frame = 1

Query:  190 EKQALFSVNGSIPEGAFCAIMALEDRGNSTLLSLLSGRRSKGRFAGKVLFEGAPVIDHQAGLPNSTLASFVRQSCYMRKDHAGFVQGLSVFDNLMFAAMLRAPGC--LEDQAA--RVETVIEETGLESHRDVKAS-----GLAVGLQRHLSVALELLSDRRILLLDQPLSGMTPHEALDFV 705
            EK  L +V G I  G + AIM     G STLL +++ R+++G  +G +L +G P          ST  +  + + Y+ +    F  G +VF+ L+FAAM++ PG   LE Q+   +VE VI+   LE  R+         G++ G ++ +S+A  LLS  R + LD+P SG+    A + +
Sbjct:  134 EKTILANVTGVISPGLW-AIMGPSGAGKSTLLDIITRRKTEGIISGSILLDGKP----------STTLAIKKYASYVAQQDI-FYGGSTVFETLLFAAMIKIPGVEKLEKQSVYEQVEQVIQAMDLEKCRNTYLGNALVRGVSGGEKKRVSIASALLSQPRCMFLDEPTSGLDSQMAREVM 302

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BLAST of mRNA_P-littoralis_Contig124.53.1 vs. uniprot
Match: A0A833IR82_9GAMM (ABC transporter ATP-binding protein n=1 Tax=Alkalilimnicola sp. S0819 TaxID=2613922 RepID=A0A833IR82_9GAMM)

HSP 1 Score: 75.5 bits (184), Expect = 2.710e-12
Identity = 56/181 (30.94%), Postives = 100/181 (55.25%), Query Frame = 1

Query:  187 AEKQALFSVNGSIPEGAFCAIMALEDRGNSTLLSLLSGRRSKGRFAGKVLFEGAPVIDHQAGLPNSTLASFVRQSCYMRKDHAGFVQGLSVFDNL-MFAAMLRAPGCLEDQAARVETVIEETGLESHRDVKASGLAVGLQRHLSVALELLSDRRILLLDQPLSGMTPHEALDFVKNVLRPL 726
            A + +L  V+ S+PEG+   ++     G +TLLS+L+G          ++ + A +++  AGL        +R+ C +      F   LSV +NL ++A +L   G    + AR+E V+E  GL  H D +A  L+ GL+R L++A+ LL++ +++LLD+P  G+ P ++  F+ + +R L
Sbjct:   22 AAQPSLREVSLSVPEGSIFGLLGPNGAGKTTLLSVLTG----------LVRKDAGLVE-VAGLDLDHAVREIRELCGVVPQELAFYPMLSVAENLRIYADVLGLGGAR--RRARIERVVEIGGLAGHMDKRAEALSGGLKRRLNLAIGLLNEPKLILLDEPTVGIDP-QSRAFILDSIRAL 188

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BLAST of mRNA_P-littoralis_Contig124.53.1 vs. uniprot
Match: A0A0Q3GGT3_BRADI (Uncharacterized protein n=4 Tax=Pooideae TaxID=147368 RepID=A0A0Q3GGT3_BRADI)

HSP 1 Score: 76.3 bits (186), Expect = 4.020e-12
Identity = 56/196 (28.57%), Postives = 101/196 (51.53%), Query Frame = 1

Query:  151 DNPSMEISTEISAEK-QALFSVNGSIPEGAFCAIMALEDRGNSTLLSLLSGRRSKGRFAGKVLFEGAPVIDHQAGLPNSTLASFVRQSCYMRKDHAGFVQGLSVFDNLMFAAMLRAPGCLEDQAARV--ETVIEETGLESHRDV-----KASGLAVGLQRHLSVALELLSDRRILLLDQPLSGMTPHEALDFVKNV 714
            D P+   +  ++A+K Q L  ++G+   G   A+M +   G +TL+ +LSGR++ G   G+V   G P             A+F R S Y  ++     Q ++V ++L+F+A LR P  + DQ  +V  E V+E   L   +D        +GL+   ++ L++A+EL+++  I+ +D+P SG+    A   ++ V
Sbjct:  874 DMPAEMKNQGVTADKLQLLSGISGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYIEGEVYISGYP----------KNQATFARMSGYCEQNDIHSPQ-ITVKESLLFSAFLRLPKDVTDQEKKVFVEEVMELIELNGLKDAIVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV 1058

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BLAST of mRNA_P-littoralis_Contig124.53.1 vs. uniprot
Match: A0A7S2BV49_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BV49_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 4.500e-12
Identity = 67/203 (33.00%), Postives = 98/203 (48.28%), Query Frame = 1

Query:  172 STEISAEKQALFSVNGSIPEGAFCAIMALEDRGNSTLLSLLSGRRS---KGRFAGKVLFEGA---PVIDHQAGLPNSTLASFVRQSCYMRKDHAGFVQGLSVFDNLMFAAMLRAPG--CLEDQAARVETVIEETGLESHRDVKAS-----GLAVGLQRHLSVALELLSDRRILLLDQPLSGMTPHEALDFVKNVL-RPLVGKK 738
            S E +A K+ L    G +  G   A+M     G +TLLS+LS R      G++AG +   G    P      GL              ++KD   F+  LSV + L FA+ LR P     E + ARV  VIE  GL+   D K       GL+ G  + L++A+ELL+D ++LLLD+PL+G+    A   +  +  R +V K+
Sbjct:   51 SKEKNATKKCLDGAFGHVRPGEMLALMGPSGSGKTTLLSILSSRPQLGKNGKWAGDIRLNGTKPWPKWQRDLGL-------------VLQKDI--FLNTLSVREELEFASQLRLPHHWSAEAKQARVTEVIERLGLKDVLDTKIGSAVERGLSGGELKRLNIAVELLNDPKLLLLDEPLTGLDSSRAFGVLSTLKDRAVVSKR 238

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig124.53.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig124.53.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FRS8_ECTSI	6.350e-46	50.82	ABC transporter domain-containing protein n=1 Tax=...	[more]
A0A177W9J7_BATDL	1.730e-15	31.61	ABC transporter domain-containing protein n=2 Tax=...	[more]
A0A5B8MKW9_9CHLO	2.350e-13	28.79	ATP-binding cassette transporter n=2 Tax=Chloropic...	[more]
UPI00038EC00A	5.120e-13	34.44	ATP-binding cassette sub-family G member 2-like is...	[more]
A0A0Q8BDV6_9HYPH	7.170e-13	30.65	ABC transporter ATP-binding protein n=3 Tax=unclas...	[more]
UPI00038EF41A	7.610e-13	34.44	ATP-binding cassette sub-family G member 2-like is...	[more]
K8EFD1_9CHLO	1.920e-12	32.60	ABC transporter family protein n=1 Tax=Bathycoccus...	[more]
A0A833IR82_9GAMM	2.710e-12	30.94	ABC transporter ATP-binding protein n=1 Tax=Alkali...	[more]
A0A0Q3GGT3_BRADI	4.020e-12	28.57	Uncharacterized protein n=4 Tax=Pooideae TaxID=147...	[more]
A0A7S2BV49_9STRA	4.500e-12	33.00	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig124	contig	P-littoralis_Contig124:314613..318994 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	0
Seed ortholog	2880.D7FRS8
PFAMs	ABC2_membrane,ABC_tran
Model size	748
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	other localisation
Exons	5
Evalue	1.04e-46
EggNOG OGs	COG1131@1\|root,KOG0061@2759\|Eukaryota
Ec32 ortholog description	P-loop containing nucleoside triphosphate hydrolase
Ec32 ortholog	Ec-25_000240.1
Description	ATPase activity, coupled to transmembrane movement of substances
Cds size	747
COG category	V

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789541.8793454-CDS-P-littoralis_Contig124:314612..314746	1680789541.8793454-CDS-P-littoralis_Contig124:314612..314746	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig124 314613..314746 +
1680789541.8903482-CDS-P-littoralis_Contig124:316544..316678	1680789541.8903482-CDS-P-littoralis_Contig124:316544..316678	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig124 316545..316678 +
1680789541.9030676-CDS-P-littoralis_Contig124:316988..317110	1680789541.9030676-CDS-P-littoralis_Contig124:316988..317110	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig124 316989..317110 +
1680789541.9178932-CDS-P-littoralis_Contig124:317486..317629	1680789541.9178932-CDS-P-littoralis_Contig124:317486..317629	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig124 317487..317629 +
1680789541.9286742-CDS-P-littoralis_Contig124:318780..318994	1680789541.9286742-CDS-P-littoralis_Contig124:318780..318994	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig124 318781..318994 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig124.53.1	prot_P-littoralis_Contig124.53.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig124 314613..318994 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig124:314613..318994+
coding sequence from alignment at P-littoralis_Contig124:314613..318994+

protein sequence of mRNA_P-littoralis_Contig124.53.1

>prot_P-littoralis_Contig124.53.1 ID=prot_P-littoralis_Contig124.53.1|Name=mRNA_P-littoralis_Contig124.53.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=249bp
CRNNYDGEYGSGGESSSASNGSSGGGGGPILEWEAVDHWMPRAKCLSEEG
DNPSMEISTEISAEKQALFSVNGSIPEGAFCAIMALEDRGNSTLLSLLSG
RRSKGRFAGKVLFEGAPVIDHQAGLPNSTLASFVRQSCYMRKDHAGFVQG
LSVFDNLMFAAMLRAPGCLEDQAARVETVIEETGLESHRDVKASGLAVGL
QRHLSVALELLSDRRILLLDQPLSGMTPHEALDFVKNVLRPLVGKKVN*

mRNA from alignment at P-littoralis_Contig124:314613..318994+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig124.53.1 ID=mRNA_P-littoralis_Contig124.53.1|Name=mRNA_P-littoralis_Contig124.53.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4382bp|location=Sequence derived from alignment at P-littoralis_Contig124:314613..318994+ (Pylaiella littoralis U1_48)
TGTCGTAATAATTATGACGGTGAATATGGTAGCGGAGGGGAATCCTCCTC
CGCCAGCAACGGCAGCAGCGGCGGCGGTGGCGGGCCGATCCTCGAATGGG
AAGCGGTTGATCACTGGATGCCCCGAGCGAAATGGTGAGAGTAGCATGGG
ACCGACCGCGGCCAGAGTTAGTAGATATTGTTGTGCTCGCGGTACTAAAA
TCTGGTATGTTTGCTGTATTTTTTGCCTGCCTTTATCCAGATAAAACGCA
CCGATAGAGGAATGCCTACAGTAGTATAATATGCGTCTGTTTTGTGTGTG
TTCGGCACATGACATGATTGTTTTCATACCAGACGTCCTTAGGGGAATGC
CGAATCTTGTGCGTGGAGGAATAACGGCGGGCACACAGTCAGACACCATC
ATCAATTATCGCAAGAAGAGTAGGCAACCCTCCCTACGGCCACAATACAA
AACCCAGCAACGCTGGACTCACCAATATTACTTCGCCGCGTGAATAGCCC
CCCCCTCGACTGCAGTTTTAGAATCTGCCAGGTTGCACACGCTCGCTCGT
GTAACTATTCACCTTGTGTTTATCATACTTCGTATTTTAGTAAAGAAGTA
GAATATTATCTGTACTTCATCCGTGCATCCCTTAAGGTCGTCTGGCGGCT
TATCCTTGGAGGATACACGGACGGGTGGCCAGAGGGGTAGGTTGGGAGGT
ACGTTGGCCAACCTTAGGTTGGGAGGAGGTTGCGGCACCGATGCCAACCT
CCGAGGTTGTCCAACCTCCACCCTCCCAACCTTCCCGGGTTGGCCCAAGG
TTGACCTACCTCTCTTTTTTTGGCCTCGGAAAAAAAGAAGAGACACTTGA
AGTCAAACCCGGTATCATTGCGTACACGAGTAGTCCCCGACCGATGCACC
AATTCCGGTTGGTAATGGTAATGGTTTTGAGAATATATACTTCATTTTTT
ATTTGATTTCTTACAAAAAACACGCCACCTGTGGTTTTTCAGCCCACGCG
GGACGCTTCGACGCTATGATATCAACGACATTCTCGCAGCTTGTTCGAAA
ACAAAAAATGTTCTGTTTTGACTTTTTTTTTCGATTTTCCGATATATATT
CCGTATTTGTTTTCGCACCTATATGTTCGAAAATTGTTTAGGGGCTGACC
ATAATCGGTCGAGGAATGCGAATTTCAAAAAATCGCTTCGGATCTACGCC
GTTTATCCGAATACAAAAAAATATCATGTCTCGGGTTTTTTTTTCGATTT
TTCGATTTTTTCGCACACATTTAAAAAAAAGTCGTATGATATGTGGGCTG
ACCGTAAATGGTCGAAGAATGCGATTTTTAAAAAAATATTTCAGATCTAG
GGCGTTTGTGCGAATACAAGAAAATGATATGTCTTGAGTTTTTGGGGTGT
TTTTTGTATTATTTCCTGAAAAAAGGTCTTCCCCTAAACAAAACAAGGTT
GGGTGGAGGTTGGCCAACTATAAGTATCGTCGCAGGTTGGGACCACCCTC
CCAACCACCGCTCCCAACCTCGGGAGGTTGGGAGAGGTTGGGAAGGCTGC
TAACCTACCCCTCGGGCCACCTGTGTATGTCTTCGCCAAATGTGTCTCCT
TTGAAGGAGGATCCCGTTCTTCGCTGAcCCCCCCCCCCCCAGACACAAAC
ATACTACACTCACATACATGTCAATCCACGCAATATCCATACTTCGAAGT
ATGTTTATAGCAATGAAATGAAAATGAGGGCAAGGTGCTACGCAGAAAGA
AGGCGAACAAAAAAGAAGAAAGGAAAGGAAACTCTCTTGTGTTGACCTTT
CTCCTGGGCGTGACTCCACGGCTGATAAGCCCCTCACGTATACTAGGTGT
GGAGTGTAGGCTGCCGCCCAGAAGAGATGGGATCACAACACGTACACACA
CTCTTTCTGTATCATCCCGAATATTCCTCAAGTTTGTCTGAAGAAGGAGA
CAACCCGTCTATGGAGATATCAACGGAGATTTCTGCGGAGAAGCAGGCCC
TCTTCTCCGTGAACGGCTCTATTCCCGAGGGGGCTTTCTGCGCTATCATG
GCACTCGAAGACCGCGGTGAGTCTTTGCCATGCCATGAAGATCATGACTA
CCCCGGTTATTGTTTTTTCATGCATAGGTTGAAAACTAACATCAAAAAAT
GTTTGACTATGATACATCAATCAGCCAAGACACGCAAGAGAGGGAGGGAG
GGAGGGAGAGAGAGAGAGAGAGACGAGAGATACCTCAGGCAGCCACACAC
GTCGACCAAGAGCTATGTAACTCGGGTGCTGAGACGTGGCACACGCCAGT
AATGCCAACTCGCGCACAGACAGACGCGGGGAGAAAAACGTACTGACTGG
ACGTGTGTTTGACTTTGCATCTGCAGGCAACAGCACGCTGCTTAGTCTCC
TGAGCGGGAGGCGGTCCAAGGGGCGCTTCGCGGGAAAGGTGCTGTTCGAG
GGGGCTCCCGTCATCGACCACCAGGCGGGGCTTCCAAATAGTACGCTAGT
GGGGGGGGGTGGTTTAGTTATTCAGTCTGGCGTTTCCTTCTGTCACTTTG
GCCCATGCAATGGTTGACGAGGGCGGTGATATATTTTTTGGGGGATAATT
ATGAGGAGAGGGGTTTAATTAAACAGTCAGTGTGTTGTGTGTGTTGCCAT
GCCGTTTATTCTGGACGACAGCAGCAGTCCCACACCTTTCGGTTTATATG
AAGGCTGTGAAGCGCCAGCCGGGGTCTAACAGGGGGGAAGGTCAACGCAC
ATTGCAAGACGCGTATTTTCACGACAAGAAGTAGAGCAGCAGTCGATTGG
TAAAGGGGCCCATACCGACGCCGACACCACAGCACACCCTTAATGCGCGC
CCCCCCGAAATAATGTATCCACAGGCTTCCTTTGTCCGACAGTCCTGCTA
CATGCGGAAGGATCACGCTGGATTTGTGCAAGGGCTGTCGGTGTTCGACA
ACCTCATGTTCGCGGCCATGCTGAGGGCGCCCGGTTGCCTCGAGGATCAG
GCTGCACGAGTGGAAACGTACGTGTGACGACCTCCTCCATGTATATCGGC
CGATTGTTTCGTTCCTTGTCGTTGCCTCATCTGTCGTACGTGATGCTTCT
CTGCATGCAGCAGCTGAAGCTTGTCTTGTTCATTCATCCGATCCACTACC
GTAATCATTACCAGTCAGGAAGTACATCATCAGCGGCCTCTACACCATAT
CTCTCTGTTTCTCCCTACCTTTATTTCTCCCTCCAGCGACATTTTTTGTG
GTTGCCCATGAGTGCACACCATCATCCTCTTCACCGGTGCCTGCACCTGC
TCTTCTCTTTCTGTACTTATCGGGTGTACCTTTATTGGGCTGTTGTGACG
CGGAAGGATAAGGTTGCTACACTTCTTCGACACTGTACTACTCTGTATAT
ACATTTTTTTTCCCTCCCCCAGACAAAAAAGGAAGACTTTCCTGAACAAG
TTTCCCTCAAAGAACAGTTTTTCCATGAAAGACGGGAGGAGCACGCACGG
ACACGAACACACCCGAATGAGGAAGACAAACTACTGCTTCGAAGTACGTG
ATTCTAGGACCGTGATTGTGTACTTGCTTGGAGCTACATAACAAGCCTCT
CGTGTGTGTTTTTTTACTTTTATTTTATAATCCATTTTGAAAATTTTAAC
AATTCTTGTAGTTAGTTGTTGTGCGTGATTGCACGGGTATACGCTACACG
TCCGTCCGCCACATCCGATCCGTCAACACCAGCACAGAAGTTTCACGAGT
TGCAATCTCTTCTCGGCCTCTTACCATTTTTGCATGGTTTTCCTTTTTTC
AAAACACGAAGTGACGGACCGTGCTGGTAGGCAGAACGCCAGTGTGAGAA
GAAGAGGGATCCGTGTTGACAGACGTTGGTAGGAGCGTTTCCTTCATGAA
GGTCACCTCCACTCTTTGAATTATTTCATCAGCTCTTTCTCTGTGGTAAT
CGTCCCGAAGATTGGGCCATACCATACCATTCATCCATGACAAACGCCAA
CATGCCATGGAATTAAGGGTACACATCAAACATAAGTTGAATTTTACCAC
ACAAACACACCTGTCTGTGTACCACAACTAACTATGCTTGCTTGCTATAT
TGGTTTTACTTGACGTGCAACAAACTTTTTTTAATGCTTCTCTCCGCATG
TATTTACTTGTGTCACAGGGTGATCGAAGAAACCGGTTTAGAGTCACACC
GTGACGTTAAGGCGAGCGGCCTCGCGGTAGGTCTCCAACGCCACCTTTCT
GTAGCTCTGGAACTCCTGTCCGACCGGCGCATCCTGCTGTTGGATCAACC
ATTGTCGGGAATGACCCCCCACGAGGCTCTGGACTTCGTGAAGAACGTCC
TTAGGCCCTTGGTGGGGAAAAAGGTGAACTGA

Coding sequence (CDS) from alignment at P-littoralis_Contig124:314613..318994+

>mRNA_P-littoralis_Contig124.53.1 ID=mRNA_P-littoralis_Contig124.53.1|Name=mRNA_P-littoralis_Contig124.53.1|organism=Pylaiella littoralis U1_48|type=CDS|length=747bp|location=Sequence derived from alignment at P-littoralis_Contig124:314613..318994+ (Pylaiella littoralis U1_48)
TGTCGTAATAATTATGACGGTGAATATGGTAGCGGAGGGGAATCCTCCTC
CGCCAGCAACGGCAGCAGCGGCGGCGGTGGCGGGCCGATCCTCGAATGGG
AAGCGGTTGATCACTGGATGCCCCGAGCGAAATGTTTGTCTGAAGAAGGA
GACAACCCGTCTATGGAGATATCAACGGAGATTTCTGCGGAGAAGCAGGC
CCTCTTCTCCGTGAACGGCTCTATTCCCGAGGGGGCTTTCTGCGCTATCA
TGGCACTCGAAGACCGCGGCAACAGCACGCTGCTTAGTCTCCTGAGCGGG
AGGCGGTCCAAGGGGCGCTTCGCGGGAAAGGTGCTGTTCGAGGGGGCTCC
CGTCATCGACCACCAGGCGGGGCTTCCAAATAGTACGCTAGCTTCCTTTG
TCCGACAGTCCTGCTACATGCGGAAGGATCACGCTGGATTTGTGCAAGGG
CTGTCGGTGTTCGACAACCTCATGTTCGCGGCCATGCTGAGGGCGCCCGG
TTGCCTCGAGGATCAGGCTGCACGAGTGGAAACGGTGATCGAAGAAACCG
GTTTAGAGTCACACCGTGACGTTAAGGCGAGCGGCCTCGCGGTAGGTCTC
CAACGCCACCTTTCTGTAGCTCTGGAACTCCTGTCCGACCGGCGCATCCT
GCTGTTGGATCAACCATTGTCGGGAATGACCCCCCACGAGGCTCTGGACT
TCGTGAAGAACGTCCTTAGGCCCTTGGTGGGGAAAAAGGTGAACTGA