mRNA_P-littoralis_Contig124.48.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig124.48.1
Unique NamemRNA_P-littoralis_Contig124.48.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig124.48.1 vs. uniprot
Match: J3LC73_ORYBR (Uncharacterized protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3LC73_ORYBR)

HSP 1 Score: 90.5 bits (223), Expect = 4.950e-15
Identity = 103/365 (28.22%), Postives = 158/365 (43.29%), Query Frame = 2
Query:  227 ADVAAARP---KKRKNLTTAERTAALHDLLARTVNGVL-RRGAAGEVGEKYGNSRRAMSNLWKKYQAQKAAGEAVPDLS-----CRRRGSARDLTQHKEALRLIPLEQRTTERSAAASIGLPKTTFRRRMKDLGVESHTRSS*SRSSPMLPRRIG*DGREASLPRLLGELAGFRGWGTWYMRTRSGGTSAQRQVEV--------------LRVRRRDSPSRKVQHKSRVTKVMFLGVIGRPRGNKPQSVDFSRKIGIQSPH*VSASPAQQPEQGRRHNGHKECGGDQGEKQAGDRPCDPRLAIKSQFPHPPANAI*ED--RTIWVQEGNARPHLINNDPGLQAAMS*DG*DNRTANQPPNSPDIS 1246
            +D +A  P   K+RK  +  E+T+    LLA ++NG L  R    ++   +   RR + ++W K +   AAG  V   S     C R+ SA DL Q    +  +PL  R + RS AA++   K+T  R   D  +  H+ S      P L        +EA+  + L         GT +   R   T  Q  V +                V   D P R VQ+K+ + KV+FL  + +PR ++     F  K+GI         P  + E  +R + ++  G    +     R       I    P   ++   ED  +TIW+Q+ NAR H++ ND     A++  G D R  NQPPNSPD++
Sbjct:  154 SDDSATEPEIIKRRKYYSEVEKTSIYGALLASSINGKLVARDTIAKIAAMFDVRRRVVQDIWTKAKKCAAAGVEVDIKSKKPGNCGRKRSAIDLAQ----VLTVPLNSRGSIRSLAAALSATKSTVHRSFMDGRLRRHSNSI----KPYL--------KEANKKQRLEFCVSMLDPGTVHDEPRF--TDMQNIVHIDEKWFNATSKNRTFYLVFNEDDPERCVQNKNSIDKVIFLSALAKPRYDEEGHCYFDGKLGIW--------PFVRKEPAQRSSHNRPKGTLVTKSITVSRETSRAFLITKVIPAIASSWPREDVGKTIWIQQDNARTHILPNDEAFALAVAQVGLDIRIMNQPPNSPDMN 492          
BLAST of mRNA_P-littoralis_Contig124.48.1 vs. uniprot
Match: UPI0019D5B331 (uncharacterized protein LOC120641424 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D5B331)

HSP 1 Score: 81.6 bits (200), Expect = 2.720e-12
Identity = 96/363 (26.45%), Postives = 153/363 (42.15%), Query Frame = 2
Query:  260 KNLTTAERTAALHDLLARTVNGVLRRGAAGEVGEKYGNSRRAMSNLWKKYQAQKAAGEAVPDLSCRRRGSARDLTQ-HKEALRLIPLEQRTTERSAAASIGLPKTTFRRRMKDLGVESHTRSS*SRSSPMLPRRIG*DGREASL-----------PRLLGELAGFRGWGTWYMRTRSGGTSAQRQVEVLRVRRRDSPSRKVQHKSRVTKVMFLGVIGRPRGNKPQSVDFSRKIGIQSPH*VSASPAQQPEQGRRHNGHKECGGDQGEKQAGDRPCDPRLAIKSQFPHPPANAI*ED--RTIWVQEGNARPHLINNDPGLQAAMS*DG*DNRTANQPPNSPDISWIWVS--SDLYSGRFRTERT 1300
            K+L+  +R      LL R+ +G LRR A   V E +  +R A+  +W++ +  +A G  V   S + + S R   +     +  IPL +R T RS A + G+ K+T  +  KD  +  H+ +      P L            L           P+ +           WY  T+   T          + + + P R V + + + KVMFL  + +PR +   +  F  KIGI         P  + E  +R +G++  G    +    DR       I    P   A    ED  +TIW+Q+ NAR H++ ND     A++  G D R  NQP NSPD++ + +   + L S  + T  T
Sbjct:  132 KDLSATQRQQIYEALLVRSNHGKLRRNATKIVAELFNVNRHAVWRIWRRVKQCRANGLPVDISSRKPKNSGRKKVEVDLSHIAAIPLCKRNTIRSLAKAAGIKKSTMHQLFKDGLLRRHSNTL----KPYLKEENKKQRLRWCLSMLDQRTLQTEPKFIDMENIIHLDEKWYNGTKKDNT-------YYLLAQEEDPYRTVHNTNCIHKVMFLTAVTKPRYDNAGNCTFDGKIGIW--------PFVRKEPAQRRSGNRARGTLVTKTMKVDRDTIRSYMISKVLPAIVACWPKEDAGKTIWIQQDNARTHVLVNDEQFARAVAQTGLDIRLMNQPANSPDMNVLDLGFFASLQSFTYTTTST 475          
BLAST of mRNA_P-littoralis_Contig124.48.1 vs. uniprot
Match: UPI0019D6A81B (uncharacterized protein LOC120678149 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D6A81B)

HSP 1 Score: 79.3 bits (194), Expect = 1.060e-11
Identity = 92/335 (27.46%), Postives = 144/335 (42.99%), Query Frame = 2
Query:  299 DLLARTVNGVLRRGAAGEVGEKYGNSRRAMSNLWKKYQAQKAAG-EAVPDLSCRRRGSARDLTQHKEALRLIPLEQRTTERSAAASIGLPKTTFRRRMKDLGVESHTRSS*SRSSPMLPRRIG*DGREASLPRLLGELAG--------FRGWGT-------WYMRTRSGGTSAQRQVEVLRVRRRDSPSRKVQHKSRVTKVMFLGVIGRPRGNKPQSVDFSRKIGIQSPH*VSASPAQQPEQGRRHNGHKECGGDQGEKQAGDRPCDPR-LAIKSQFPHPPANAI*EDR--TIWVQEGNARPHLINNDPGLQAAMS*DG*DNRTANQPPNSPDIS 1246
            +LLA+T   VL  G + +V EK+G  R  +  +W+    Q   G   V +   R  G  R +    EA++ +PL QRTT +  A ++G+ KT    R ++     HT          L   +  + ++A +   L  L          F+           W+ RTR       R  +       + P R+V+ K+ + KVMFL V+ RPR ++  +  F  K+GI         P    E  +R + +++ G    +     +    R   I    P   A    E+R   I++Q+ NAR H+  +DP   AA   DG D R   QPPNSPD++
Sbjct:   58 ELLAKTDPPVLHHGVSRQVAEKFGVPRLVVQRIWR--SGQNYGGITGVKNRLVRNCGRKR-IELDMEAIKDVPLSQRTTFQDLANALGVKKTMLYNRYREGYFRRHTND--------LKFSLTDENKKARVRYCLSMLQALYLDNDPSFKPLYNVIYIDEKWFYRTR-------RNQKYYLANNEERPHREVKSKNFIEKVMFLAVVTRPRFDENGNCIFDGKLGI--------FPFTYQEPAKRWSRNRDRGTLITKAMTSVKKEHSRDFLINKVLPAVKAKWPAEERHMPIFIQQDNARTHIAVDDPAFVAAAQADGWDIRLTCQPPNSPDLN 366          
BLAST of mRNA_P-littoralis_Contig124.48.1 vs. uniprot
Match: UPI001D01165B (uncharacterized protein LOC123140822 n=3 Tax=Triticum TaxID=4564 RepID=UPI001D01165B)

HSP 1 Score: 75.9 bits (185), Expect = 1.340e-10
Identity = 86/306 (28.10%), Postives = 140/306 (45.75%), Query Frame = 2
Query:  380 RAMSNLWKKYQAQKAAGEAVPDLSCRRRGSAR---DLTQHKEALRLIPLEQRTTERSAAASIGLPKTTFRRRMKDLGVESHTRSS*SRSSP------------MLPRRIG*DGREASLPRLLGELAGFRGWGTWYMRTRSGGTSAQRQVEVLRVRRRDSPSRKVQHKSRVTKVMFLGVIGRPRGNKPQSVDFSRKIGIQSPH*VSASPAQQPEQGRRHNGHKECGGDQGEKQA-GDRPCDPRL-AIKSQFPHPPANAI*EDRTIWVQEGNARPHLINNDPGLQAAMS*DG*DNRTANQPPNSPDIS 1246
            R +  +WK+  AQ A GE +   + R+R   R   DL   +  +  IPL +R+T R+ A S+ +P +T RRR K   +  HT S      P            M+ +    D    ++P  +           W+  T+   T    + E   VR        VQ+K+ + KVMFL  + RPR +   +V F  KIG+ +   +  +PA++  + R   G KE       +    +  C+  + AI++Q+P        ++RTI++Q+ NAR H+  +D    AA++    D R   QP NSPD++
Sbjct:   82 RTVERIWKEANAQLARGEEINVSNKRKRRCGRKRADLDLSR--IPSIPLNKRSTLRALARSLDVPYSTLRRRFKWGKIRKHTNSLKPTLKPENKLSRLKFCISMIDQTTIAD----AMPSFIDMQNIVHIDEKWFDMTKRNRTYYLHEEEPDSVRT-------VQNKNSIGKVMFLTAVARPRFDDQGNVTFDGKIGVWA--FIKETPAKKDSKNRL-KGTKELKSVTVTRNVMREYLCEKVIPAIEAQWPE-------DNRTIYIQQDNARTHVPPDDSDFLAAVAESELDIRLMQQPANSPDMN 364          
BLAST of mRNA_P-littoralis_Contig124.48.1 vs. uniprot
Match: UPI001F5DF1EE (uncharacterized protein LOC124666835 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5DF1EE)

HSP 1 Score: 75.9 bits (185), Expect = 2.050e-10
Identity = 101/348 (29.02%), Postives = 164/348 (47.13%), Query Frame = 2
Query:  254 KRKNLTTAERTAALHDL-LARTVNGVLRRGAAGEVGEKYGNSRRAMSNLWKKYQAQKAAGEAVPDLSCRRRGSARDLTQHKEALRL--IPLEQRTTERSAAASIGLPKTTFRRRMKDLGVESHTRSS*SRSSPMLPRRIG*---------DGREASLPRLLGELAGF-RGWGTWYMRTRSGGTSAQRQVEVLRVRRRDSPSRKVQHKSRVTKVMFLGVIGRPRGNKPQSVDFSRKIGIQSPH*VSASPAQQPEQGRRHNGHKECGGDQGEKQA-GDRPCDPRL-AIKSQFPHPPANAI*ED--RTIWVQEGNARPHLINNDPGLQAAMS*DG*DNRTANQPPNSPDIS 1246
            ++K+LT  ER  A   L + ++ +G  +      V      S R +  +W+K Q Q A G+ V D+S R++G++    +  E  R+  IPL +R T RS A S+G+ ++T  RR K   ++  T S   + S  L  +I           +  + +L     E+    R    W+  TR   T      E         P R V++K+ + KVMFL  + +PR ++   V F  KIG  +   V  +PA +  +  R  G  E    +  +    D  C+  + AI+ ++P        ED  RTI++Q+ NA+PHL+ +D G + A++    D R   QPPNSPD++
Sbjct:  206 RKKDLTNEERYGAYFALEVIKSRDGKFQTEDKELVASLLNTSVRTVERIWEKAQKQLAEGQPV-DVSNRKKGNSGPKRKDLELSRITTIPLNKRRTIRSLAKSLGVNRSTLHRRFKWGELKRITDSV--KPSMTLANKIQRLQFCMSMLDEKPDKNLQCRFKEMDNMVRIDEKWFDMTRVRNTYYLHPEEP-------KPLRSVKNKNSIGKVMFLTAVAKPRYSEDGVVTFDGKIGTWA--FVKNTPALKRSK-LRPKGTIEIKSVKVTRDVMRDYMCNLVIPAIQDKWPD-------EDLGRTIFIQQDNAKPHLLPHDAGFRNAVAQTDLDIRLLQQPPNSPDMN 533          
BLAST of mRNA_P-littoralis_Contig124.48.1 vs. uniprot
Match: W4GIW7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GIW7_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.480e-10
Identity = 96/342 (28.07%), Postives = 146/342 (42.69%), Query Frame = 2
Query:  257 RKNLTTAERTAALHDLLARTV-NGVLRRGAAGEVGEKYGNSRRAMSNLWKKYQAQKAAG-EAVPDLSCRRRGSARDLTQHK---EALRLIPLEQRTTERSAAASIGLPKTTFRRRMKD---LGVESHTRSS*SRSSPMLPRRIG*DGREASLP---RLLGELAGFRGWGTWYMRTRSGGTSAQRQVEVLRVRRRDSPSRKVQHKSRVTKVMFLGVIGRPRGNKPQSVDFSRKIGIQSPH*VSASPAQQPEQGRRHNGHKECGGDQGEKQAGDRPCDPRLAIKSQFPHPPANAI*EDRT-IWVQEGNARPHLINNDPGLQAAMS*DG*DNRTANQPPNSPDIS 1246
            RKNLT  ER A L  LL R    G L RGA  +V  ++G  R  +  +WK+       G     D+S + +G       H+   + L+ IP  +RTT RS AA++ +PKTT  R  K    +   S  + S + ++ ++  +   D   + L    R    +        W   +R   T    + E       + P R  + K  + KVMFL  + RPR +      F  KIG    H    +PA      +R + ++  G  +    +  R    ++ I    P   A    E+   I +Q+ NARPH+   D  + AA   DG D +   Q PNSPD++
Sbjct:    2 RKNLTDVERNAVLQRLLIRMQPGGKLPRGAMVDVALEFGVVRSTVRRIWKRACVDVHGGVRPCADVSSQMKGRVGRKQVHESISQRLQAIPKARRTTFRSIAAAMNVPKTTLHRYYKKGLFIKYSSVLKPSLTDANKVVRLKWSVDALRSGLDGGLRFDDMMDCVHVDEKWLFASRVRATYYLAKGE-------EPPHRTTKSKLHIMKVMFLSAVVRPRWDNESGSWFDGKIGTW--HFTEWNPA------KRSSRNRPAGTMELSAVSVTRRVYKQMLINKVIPAIKARWPKEETCKIRIQQDNARPHVSPLDAEIVAACRQDGWDMQVVFQLPNSPDLN 328          
BLAST of mRNA_P-littoralis_Contig124.48.1 vs. uniprot
Match: UPI00188F83A1 (uncharacterized protein LOC119300137 n=2 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI00188F83A1)

HSP 1 Score: 74.3 bits (181), Expect = 4.040e-10
Identity = 91/344 (26.45%), Postives = 156/344 (45.35%), Query Frame = 2
Query:  251 KKRKNLTTAERTAALHDL--LARTVNGVLRRGAAGEVGEKYGNSRRAMSNLWKKYQAQKAAGEAVPDLSCRRRGSARDLTQHKEALRLIP---LEQRTTERSAAASIGLPKTTFRRRMKDLGVESHTRSS*SRSSPMLPRRIG*DGREASLPRL----LGELA-GFRGWGTWYMRTRSGGTSAQRQVEVLRVRRRDSPSRKVQHKSRVTKVMFLGVIGRPRGNKPQSVDFSRKIGIQSPH*VSASPAQQPEQGRRHNGHKECGGDQGEKQAGDRPCDPRLAIKSQFPHPPA--NAI*EDRTIWVQEGNARPHLINNDPGLQAAMS*DG*DNRTANQPPNSPDIS 1246
            ++R  LT A+R AA   L  L ++  G  +R    +V   +G   R +  +W+    QK  G+ V   + R+    R    + + L LIP   L +R+T RS A ++G+  TT  ++ K   +  H+    +R  P+L  +   D  +  L  +    LG+++  FR             +  +R+     +   + P R V  K+ + KVMFL  + RPR ++  ++ FS KIG+     V+A+         + + ++E G  + +     R       I+   P   A   A  + + I++Q+ NAR H++ ND     A+   G D R   QPPNSPD++
Sbjct:   33 RQRNWLTDAQRYAAYMSLETLHKSRGGKFKRTDKKDVAAIFGAHVRVIQRIWETAMKQKGLGQEVDVSNKRKENCGRK--SYDDILSLIPTIPLNKRSTIRSLAKALGVSPTTLYKKFKLNKIRRHS----NRVKPVLTEKNKRDRVDFCLSMIDEATLGDVSPSFRSMHNIVHIDEKWFSMTKRKRNYYLLPDEEDPERPV--KNSIGKVMFLTAVARPRFDEDGNMTFSGKIGVWPFVRVTAAA--------KKSKNREKGTLETKPVIVTRDVMREYIIQKVVPAIQALWPADDDGQPIFIQQDNARTHILPNDQAFAEAVDESGLDIRIMYQPPNSPDMN 360          
BLAST of mRNA_P-littoralis_Contig124.48.1 vs. uniprot
Match: UPI001D0203E2 (uncharacterized protein LOC123170757 n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D0203E2)

HSP 1 Score: 74.7 bits (182), Expect = 4.120e-10
Identity = 93/359 (25.91%), Postives = 152/359 (42.34%), Query Frame = 2
Query:  236 AAARPKKRKNLTTAERTAALHDLLART-VNGVLRRGAAGEVGEKYGNSRRAMSNLWKKYQAQKAAGEAVPDLSCRRRGSARDLTQHKEALRLIPLEQRTTERSAAASIGLPKTTFRRRMKDL---GVESHTRSS*SRSSPMLPRRIG*DGREASL----PRLLGELAGFRGWGTWYMRTRSGGTSAQRQVEVLRVRRRDSPSRKVQHKSRVTKVMFLGVIGRPRGNKPQSVDFSRKIGIQSPH*VSASPAQQPEQGRRHNGHKECGGDQGEKQAGDRPCDPRL---AIKSQFPHPPANAI*EDR--TIWVQEGNARPHLINNDPGLQAAMS*DG*DNRTANQPPNSPDISWI---WVSS 1264
            A A    R+  T  ++      LLAR    G L++G    V      SRR +S +WK+ +          +L  +     + ++   EAL  IP  +RTT R  AA + + K+T  RR+K+     V +  + S + ++         +  E S     P               + RTR       +  ++    R ++P R+ +HK+ + ++MFL  + RPR +   +  F  KIG+ +   V    AQ+ +   R  G  E        +   R    +    AIK ++P         DR  T+++Q+ NAR H++ NDP      +  G D R  NQPPNSPD + +   W +S
Sbjct:  193 ALANKNNREQYTVEDKRNIYAMLLARNGERGRLKKGVLDSVVRDGNCSRRCVSRIWKETKTGGGVNSIKNNLKLKT--GRKKMSLDIEALEAIPPGERTTIRQVAAGLNMSKSTVHRRLKEKVMRRVSNELKPSLTEANKKARVAYCLENLEPSSLEDNPTFKASFNKVHLDEKIFYRTR-------KTQKMYLSHREEAPERECKHKNHIQQIMFLSAMARPRYDSQGNCVFDGKIGVWA--FVDWVQAQK-KSANRGRGEWELKPSSSVDRNKSREYIVQYVLPAIKEKWPE-------SDRWNTVYIQQDNARTHVLANDPIFAMEAAKGGWDIRIVNQPPNSPDCNILDLGWFAS 532          
BLAST of mRNA_P-littoralis_Contig124.48.1 vs. uniprot
Match: A0A3L6T5Y7_PANMI (Uncharacterized protein n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6T5Y7_PANMI)

HSP 1 Score: 73.9 bits (180), Expect = 4.750e-10
Identity = 94/346 (27.17%), Postives = 152/346 (43.93%), Query Frame = 2
Query:  257 RKNLTTAERTAALHDLLARTVNGVLRRGAAGEVGEKYGNSRRAMSNLWKKYQAQKAAGEAVPDLSCRRRG--SARDLTQHKEALRLIPLEQRTTERSAAASIGLPKTTFRRRMKDLGVESHTRSS*SRSSPMLPRRIG*DGR--------EASL----PRLLGELAGFRGWGTWYMRTRSGGTSAQRQVEVLRVRRRDSPSRKVQHKSRVTKVMFLGVIGRPRGNKPQSVDFSRKIGIQSPH*VSASPAQQPEQGRRHNGHKECGGDQGEKQAGDRPCDPRL--AIKSQFPHPPANAI*EDRTIWVQEGNARPHLINNDPGLQAAMS*DG*DNRTANQPPNSPDIS 1246
            R+ LT A+R A    L A++ NG L + A  EV   +    R +  +W+    Q A G+ V D+S RR G    + +      +  IPL +R+T +S A S+ +  +T  R+ K   +  H+    S   P+L      D          +A+L    P+ +           WY  T+ G            +   D P R VQ+K+ + KVMF+  + RP+ +    + FS K+ + +   V   PA +  Q  R  G  E       K    +    ++  AI+ ++P         D+TI++Q+ NAR H++ NDP    A++  G D R   Q  NSPD++
Sbjct:    4 RRWLTDAQRYAVYTSLHAKSRNGKLPKKATKEVATFFHAHIRVIQRIWRCACEQIALGQEV-DVSNRRTGRVGCKKVQLDHSQMASIPLNRRSTLKSLAKSLDVSVSTLHRKFKLGEIRCHS----STLKPLLRESNKRDRLKFCILMLDQATLGDAEPKFIDIQNIVHIDEKWYFMTKKG--------RKYYLPEEDDPVRAVQNKNSIGKVMFVTAVARPKYDGQGDLIFSGKLRVWA--FVKEVPAARRSQ-NRERGTLETKSIIVNKDVMRQYLIEKVIPAIEDKWPQED-----RDKTIFIQQDNARTHVLPNDPAFLEAVARTGLDIRLMQQSANSPDMN 328          
BLAST of mRNA_P-littoralis_Contig124.48.1 vs. uniprot
Match: J3S7K7_BETVV (Mariner transposase n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=J3S7K7_BETVV)

HSP 1 Score: 72.4 bits (176), Expect = 1.970e-9
Identity = 86/314 (27.39%), Postives = 134/314 (42.68%), Query Frame = 2
Query:  326 VLRRGAAGEVGEKYGNSRRAMSNLWKKYQAQKAAGEAVPDLSCRRRGSARDLTQHK--EALRLIPLEQRTTERSAAASIGLPKTTFRRRMKDLGVESHTRSS*SRSSPMLPRRIG*DGREASLPRLLGELAGFRGWGTWYMRTRSGGTSAQRQVEVLRVRRRDSPSRKVQHKSRVTKVMFLGVIGRPRGNKPQSVDFSRKIGIQSPH*VSASPAQQPEQGRRHNGHKECGG-DQGEKQAGDRPCDPRLAIKSQFPHP----PANAI*EDRTIWVQEGNARPHLINNDPGLQAAMS*DG*DNRTANQPPNSPDIS 1246
            VL RG    + +KY  SR  M+ +W   + QK  G  V +++ R+ G+     +    EALR +PL+QRTT RS A ++ +  +T  R +K   + SHT S   + +P             S+P+ + EL  F                ++       +   + P R  Q K+ +TKVMFL  I RP       + +  KIGI         P     + +R + ++  G  ++  KQ+  +     + I    P      P N   E   IW+Q+ NARPH+  ND     A    G +     QP  SPD++
Sbjct:   97 VLPRGLLTTLRQKYSCSRSTMNRIWTLARKQKIDGVEV-NVASRKIGNCGRKVKFTDDEALRRVPLKQRTTIRSFATALEVSPSTVYRLLKRGILRSHTNSIKPKLTPKHKVARMKFVLSQSIPKSMNELPKFNHLYNMIHIDEKWFFMSKITQRFYLLSEEEDPYRACQSKAFITKVMFLAAIARPWLGPTGDILWDGKIGI--------FPFIDEVRAQRWSANRPAGTIEKKAKQSITKETIREMIINKLLPAIRAKWPENGCKE---IWIQQDNARPHIQPNDAEFLEACREGGFEINIICQPAQSPDLN 398          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig124.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
J3LC73_ORYBR4.950e-1528.22Uncharacterized protein n=1 Tax=Oryza brachyantha ... [more]
UPI0019D5B3312.720e-1226.45uncharacterized protein LOC120641424 n=1 Tax=Panic... [more]
UPI0019D6A81B1.060e-1127.46uncharacterized protein LOC120678149 n=1 Tax=Panic... [more]
UPI001D01165B1.340e-1028.10uncharacterized protein LOC123140822 n=3 Tax=Triti... [more]
UPI001F5DF1EE2.050e-1029.02uncharacterized protein LOC124666835 n=1 Tax=Loliu... [more]
W4GIW7_9STRA2.480e-1028.07Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
UPI00188F83A14.040e-1026.45uncharacterized protein LOC119300137 n=2 Tax=Triti... [more]
UPI001D0203E24.120e-1025.91uncharacterized protein LOC123170757 n=1 Tax=Triti... [more]
A0A3L6T5Y7_PANMI4.750e-1027.17Uncharacterized protein n=1 Tax=Panicum miliaceum ... [more]
J3S7K7_BETVV1.970e-927.39Mariner transposase n=2 Tax=Beta vulgaris subsp. v... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig124contigP-littoralis_Contig124:278534..281135 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4792.ETI42569
Model size2602
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.59e-08
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota,3Q9GY@4776|Peronosporales
Cds size537
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789541.5762937-UTR-P-littoralis_Contig124:278533..2786241680789541.5762937-UTR-P-littoralis_Contig124:278533..278624Pylaiella littoralis U1_48UTRP-littoralis_Contig124 278534..278624 +
1680789541.602014-UTR-P-littoralis_Contig124:279161..2811351680789541.602014-UTR-P-littoralis_Contig124:279161..281135Pylaiella littoralis U1_48UTRP-littoralis_Contig124 279162..281135 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789541.587-CDS-P-littoralis_Contig124:278624..2791611680789541.587-CDS-P-littoralis_Contig124:278624..279161Pylaiella littoralis U1_48CDSP-littoralis_Contig124 278625..279161 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig124.48.1prot_P-littoralis_Contig124.48.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig124 278625..279161 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig124.48.1

>prot_P-littoralis_Contig124.48.1 ID=prot_P-littoralis_Contig124.48.1|Name=mRNA_P-littoralis_Contig124.48.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=179bp
MSMNEGTVGTGAASSGAAAASSGAAAASSGAAAPGSGAAADDAAAADVAA
ARPKKRKNLTTAERTAALHDLLARTVNGVLRRGAAGEVGEKYGNSRRAMS
NLWKKYQAQKAAGEAVPDLSCRRRGSARDLTQHKEALRLIPLEQRTTERS
AAASIGLPKTTFRRRMKDLGVESHTRSS*
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mRNA from alignment at P-littoralis_Contig124:278534..281135+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig124.48.1 ID=mRNA_P-littoralis_Contig124.48.1|Name=mRNA_P-littoralis_Contig124.48.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2602bp|location=Sequence derived from alignment at P-littoralis_Contig124:278534..281135+ (Pylaiella littoralis U1_48)
CAGCTATCATACCCGACCCAGGGATGGCAGAGGGAAGCCGCGGCAAAGCA CAGAGTTTGCTCCGTTGACCGTCCCCTATCACCTCCTGGCCATGTCGATG AACGAGGGTACTGTTGGTACTGGTGCTGCAAGTTCTGGCGCCGCTGCTGC AAGTTCTGGCGCCGCTGCTGCAAGTTCTGGCGCCGCTGCTCCAGGTTCTG GCGCTGCTGCTGATGATGCTGCTGCTGCTGATGTAGCTGCTGCCAGACCC AAGAAGAGAAAGAACCTCACCACGGCCGAGCGAACTGCCGCGCTCCATGA CCTCCTAGCCCGCACCGTTAACGGTGTGCTCCGCAGGGGTGCTGCTGGAG AGGTAGGTGAGAAGTATGGCAACTCTCGACGCGCCATGTCGAATCTGTGG AAAAAGTACCAAGCACAGAAGGCTGCGGGTGAAGCTGTCCCTGATTTGTC CTGTCGCCGCAGGGGTTCCGCAAGGGACCTAACCCAGCACAAAGAGGCGC TACGATTAATCCCGCTTGAGCAACGCACGACCGAGCGGAGCGCAGCTGCA TCGATCGGCCTCCCGAAGACAACGTTTCGTCGCCGCATGAAGGACCTGGG GGTGGAGTCGCACACGCGTTCCTCTTGAAGCCGATCATCTCCAATGCTTC CAAGGCGGATCGGCTGAGATGGGCGAGAAGCTTCACTGCCACGACTGTTG GGGGAACTCGCAGGTTTCAGGGGATGGGGAACGTGGTACATGCGGACGAG AAGTGGTGGCACCTCTGCACAAAGACAAGTAGAGGTATTACGTGTTCGAC GGCGAGACTCCCCCAGCCGGAAGGTTCAACACAAAAGCCGCGTCACGAAG GTGATGTTCCTGGGAGTTATTGGGCGGCCAAGGGGCAACAAGCCCCAGAG CGTCGATTTTAGCCGAAAGATCGGGATCCAATCCCCTCATTGAGTAAGTG CAAGCCCAGCGCAACAGCCGGAACAGGGCCGCCGGCACAATGGTCACAAA GAATGTGGAGGGGACCAAGGAGAAAAACAAGCTGGTGATCGACCATGTGA CCCTCGACTCGCCATCAAGAGCCAGTTTCCTCATCCCCCCGCCAATGCCA TCTAGGAAGACAGGACAATTTGGGTGCAGGAAGGCAACGCCCGCCCCCAC CTGATCAACAACGACCCAGGGTTGCAGGCTGCAATGTCTTAAGACGGGTG AGACAACCGCACGGCCAATCAGCCGCCCAACAGCCCGGACATATCATGGA TTTGGGTTTCTTCAGACCTGTACAGCGGTCGCTTCAGGACCGAACGAACC CAACAACTTTGATGCGCTGGTACTGGCAATGAGGGCGGCATGGCAGAAAG ATTCGCCAAACGCACTCAACCGGGTGTGAATTATCTCGCAGGCGTGCCTG GAGCAGATCATGCCTGCGGGAGGGGACAACGATGTTACCGCACCTTCGCA ATGGCAGGCTCGAGAATACTGGTATCATATGCTGGGGTGACAGCTGGAGT GCAGCGAGGAGGCATGGGCCAAGGGTGCTGCGGCTGGCGGAGTTGGAGGC CGATGCGGCAGGGAGAGGGGCGGCCGGGAGCGGCACGACGGGGCCTCTCG ATGTGGTTGTCGCCGTTGTTGATTGTTTTGTTTCTTGTTCATCGTGTGAC CGAAGTTTTTTGTGCCTACTACTGCTGCTGTACTACTGCTGCTGGCAGTG CAATTATCACGGCGCGGTTCGTGGTTGTACTTCGAAGGATTTTCACGATT AGGGCGACCGCTGTCGTTGTCGCCGTTGTTTCTTGTTTTATTCGTTGTTC AACGCTTCGACAAAGTATTCTGCGCCCCCTGCCTGTTTGTGTTTGAAGGA CCACTACTACTGCTGATTGGCAGTGAAGTCATCACTGCAAGTCATCTTTG GATGTATATTCACGATTAGGGCGACTGCTGTGGTCATTTTTTCTTTTTAA GCTGTGCTTCTAGAAATCGACACCGACATACGATTGTATGAACGACAACT GGATGTCACGTTTTTTTTGTTTTGCAATGAAGCCACCATTGGTGTTCCTT TTGAATTCGTGCCATGGTTACGAAGACTTCGTATAGTGCCGTTTCAGGGG AGAAGTACTCCCGGTGGAACGATATCATGTCATCCCCCTGTTTCCTGGTT TCGGAATGCAAAGTCATCACTGCGGGTCATCTTTGGTTGTATATTTACGA TTAGGGCGACTGCTGTGGATGTCACGTTTTTTTGTTTTGCAATGAAGCCA CCATTAGTGTTCCTTTCAACTTCGTGCCATTGTTACGAAGACTTCGTTTA GTGCCGTTTCGAGGGAAAAGTACTCCCGGTGGAACAATATCATGTCATCT CTATTTCCGAAATGCATTTTTGCGATCTGCTGGGTAGCGAACTCGAACCG GTACTGAACGATGGAACCGGAAGAAGAATAATGCGTGGGTGGTTTCCCCA AAATACTGCTGAAAAGTAGACATCAAGTGCCACAAAGTGCTGTGTGCTGT GTCTTTCTTTTCGACGATGACATAACTATATGCTGGGTGCTCGTGGGGGA TATCTGCCGTGCTCAGCCGCAGGCAGCGGGATTACGTGTATATTTTTCAG CC
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Coding sequence (CDS) from alignment at P-littoralis_Contig124:278534..281135+

>mRNA_P-littoralis_Contig124.48.1 ID=mRNA_P-littoralis_Contig124.48.1|Name=mRNA_P-littoralis_Contig124.48.1|organism=Pylaiella littoralis U1_48|type=CDS|length=537bp|location=Sequence derived from alignment at P-littoralis_Contig124:278534..281135+ (Pylaiella littoralis U1_48)
ATGTCGATGAACGAGGGTACTGTTGGTACTGGTGCTGCAAGTTCTGGCGC
CGCTGCTGCAAGTTCTGGCGCCGCTGCTGCAAGTTCTGGCGCCGCTGCTC
CAGGTTCTGGCGCTGCTGCTGATGATGCTGCTGCTGCTGATGTAGCTGCT
GCCAGACCCAAGAAGAGAAAGAACCTCACCACGGCCGAGCGAACTGCCGC
GCTCCATGACCTCCTAGCCCGCACCGTTAACGGTGTGCTCCGCAGGGGTG
CTGCTGGAGAGGTAGGTGAGAAGTATGGCAACTCTCGACGCGCCATGTCG
AATCTGTGGAAAAAGTACCAAGCACAGAAGGCTGCGGGTGAAGCTGTCCC
TGATTTGTCCTGTCGCCGCAGGGGTTCCGCAAGGGACCTAACCCAGCACA
AAGAGGCGCTACGATTAATCCCGCTTGAGCAACGCACGACCGAGCGGAGC
GCAGCTGCATCGATCGGCCTCCCGAAGACAACGTTTCGTCGCCGCATGAA
GGACCTGGGGGTGGAGTCGCACACGCGTTCCTCTTGA
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