mRNA_P-littoralis_Contig124.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig124.2.1 vs. uniprot
Match: D7G4V1_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V1_ECTSI) HSP 1 Score: 426 bits (1095), Expect = 1.320e-142 Identity = 222/259 (85.71%), Postives = 233/259 (89.96%), Query Frame = 1
Query: 4 GGQGEATGRGEFLSRAVISSTAALLGVGTASGMAGVPPASALVKGNAPPPGYNKKRGSGSGNGEREATPTAGAVPGDDDPSRTFSVTKSGIRFKDLKIGDGAEVTPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVGAVDEAIVGMRVGGVRRVAVRPERGWKKLDPKCATEIDMGVMSGVPGAALAKVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGAKESNGRIF 780
GG+G +T RG+FLS A +++ AA+LGV A + PPASALVKGNAPPPGYNKKRGSG GNGE EATPTA A P D DPSRTFSVT SGIRFKDLKIG G EV PANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLG+GRL+ AVDE +VGMRVGGVRRVAVRPERGWKK DPKCATEIDMGVMSGVPGAALAKVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGAKE NGRIF
Sbjct: 53 GGEGGSTNRGDFLSGAAVTA-AAVLGVSAAGTVGAPPPASALVKGNAPPPGYNKKRGSGYGNGEPEATPTADAGPEDSDPSRTFSVTSSGIRFKDLKIGVGPEVKPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGSGRLISAVDEGVVGMRVGGVRRVAVRPERGWKKQDPKCATEIDMGVMSGVPGAALAKVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGAKEGNGRIF 310
BLAST of mRNA_P-littoralis_Contig124.2.1 vs. uniprot
Match: A0A835YV71_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV71_9STRA) HSP 1 Score: 245 bits (626), Expect = 3.400e-73 Identity = 135/238 (56.72%), Postives = 161/238 (67.65%), Query Frame = 1
Query: 115 PASALVKGNAPPPGYNKKRGSGSGNGEREAT---------------------PTAGAVPGDDDPSRTFSVTKSGIRFKDLKIGDGAEVTPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVGAVDEAIVGMRVGGVRRVAVRPERG--WKKLDPKCATEIDMGVMSGVPGAALAKVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGAK 759
PASALVKGNAPP + R ERE + T G D F VT++G+R+KD+ +G GA+V + VD+RYRV KLGKRSY+G+SGE VFSLGYGEDDDKEG V+TVP+G G+L+ AVDEAIVGM++GG RRV VRP+RG WKK DP CA ID+G+ SG+PGA +AKVEDCID TLEPRPV YGA RRMARRFDE LIVE+E V +
Sbjct: 28 PASALVKGNAPPTAEERARKRAEA-AEREKSRSISEAKDAGEKREVEMRSKYETEETALGSD---TAFKVTQNGVRYKDIALGAGAQVNKGSTVDLRYRVMKLGKRSYNGLSGEATMVFSLGYGEDDDKEGSVVTVPVGKGKLITAVDEAIVGMKLGGKRRVLVRPDRGQGWKKDDPNCAALIDVGIASGIPGATIAKVEDCIDETLEPRPVSYGAKRRMARRFDEALIVEIEPVAVR 261
BLAST of mRNA_P-littoralis_Contig124.2.1 vs. uniprot
Match: A0A6H5JW52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW52_9PHAE) HSP 1 Score: 224 bits (570), Expect = 2.040e-65 Identity = 116/126 (92.06%), Postives = 117/126 (92.86%), Query Frame = 1
Query: 124 ALVKGNAPPPGYNKKRGSGSGNGEREATPTAGAVPGDDDPSRTFSVTKSGIRFKDLKIGDGAEVTPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVGAVDEA 501
ALVKGNAPPPGYNKKRGSG GNGE EATPTA A P D DPSRTFSVT SGIRFKDLKIGDGAEV PANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLG+GRLV AVDEA
Sbjct: 92 ALVKGNAPPPGYNKKRGSGYGNGEPEATPTADAGPEDSDPSRTFSVTSSGIRFKDLKIGDGAEVKPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGSGRLVSAVDEA 217
BLAST of mRNA_P-littoralis_Contig124.2.1 vs. uniprot
Match: A0A7S2XW09_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW09_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.090e-53 Identity = 103/219 (47.03%), Postives = 143/219 (65.30%), Query Frame = 1
Query: 115 PASALVKGNAPPPGYNKKRGSGSGNG---EREATPTAGAVPGDDDPSRTFSVTKSGIRFKDLKIGDGAEVTPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVGAVDEAIVGMRVGGVRRVAVRPERGWKKLDPK-CATEIDMGVMSGVPGAALAKVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGAK 759
P +ALVKG+APP GY K + G ++ A P+ A + S T SG+RFKD+ +G G EV + V +RYR+ + GKRSYDGISGE +F LGYGEDDDK GD L V +G+G++V A+++ ++G + GGVRRV VRP+ GW+K D + CA ++D+G VPGA + E C+DL L P P + A R++ARRFDE+LI E+E+V +
Sbjct: 8 PTNALVKGSAPPEGYGKIKSQAPKEGASLDKSAEPSTIAEGSMEAAEGELSFTPSGVRFKDMVLGSGQEVGSDSKVSLRYRILRSGKRSYDGISGEGSLIFGLGYGEDDDKVGDTLKVGMGSGKMVKALEDGLIGAKAGGVRRVLVRPDMGWQKSDLEACAPKLDLGATGTVPGA-ITYTEGCMDLDLLPSPRTFQAKRKLARRFDESLIAEIEVVSVE 225
BLAST of mRNA_P-littoralis_Contig124.2.1 vs. uniprot
Match: A0A7S2XYV7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYV7_9STRA) HSP 1 Score: 192 bits (489), Expect = 8.560e-53 Identity = 103/219 (47.03%), Postives = 143/219 (65.30%), Query Frame = 1
Query: 115 PASALVKGNAPPPGYNKKRGSGSGNG---EREATPTAGAVPGDDDPSRTFSVTKSGIRFKDLKIGDGAEVTPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVGAVDEAIVGMRVGGVRRVAVRPERGWKKLDPK-CATEIDMGVMSGVPGAALAKVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGAK 759
P +ALVKG+APP GY K + G ++ A P+ A + S T SG+RFKD+ +G G EV + V +RYR+ + GKRSYDGISGE +F LGYGEDDDK GD L V +G+G++V A+++ ++G + GGVRRV VRP+ GW+K D + CA ++D+G VPGA + E C+DL L P P + A R++ARRFDE+LI E+E+V +
Sbjct: 77 PTNALVKGSAPPEGYGKIKSQAPKEGASLDKSAEPSTIAEGSMEAAEGELSFTPSGVRFKDMVLGSGQEVGSDSKVSLRYRILRSGKRSYDGISGEGSLIFGLGYGEDDDKVGDTLKVGMGSGKMVKALEDGLIGAKAGGVRRVLVRPDMGWQKSDLEACAPKLDLGATGTVPGA-ITYTEGCMDLDLLPSPRTFQAKRKLARRFDESLIAEIEVVSVE 294
BLAST of mRNA_P-littoralis_Contig124.2.1 vs. uniprot
Match: L1JF69_GUITC (PPIase FKBP-type domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JF69_GUITC) HSP 1 Score: 189 bits (481), Expect = 1.700e-52 Identity = 101/224 (45.09%), Postives = 139/224 (62.05%), Query Frame = 1
Query: 112 PPASALVKGNAPPPGYNKKRG-----------SGSGNGEREATPTAGAVPGDDDPSRTFSVTKSGIRFKDLKIGDGAEVTPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVGAVDEAIVGMRVGGVRRVAVRPERGWKKLDPKCATEIDMGVMSGVPGAALAKVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMV 750
P A ALVKG APPP + KK+ + +REAT D FSVTK G R++D++IG GAEV P + V+++YRV +LGKRS DG+SGE VFS GYGEDDDKE D L +G L+ A+ ++ GM+ GG+RR++V+PERGWK D C +D+G G+PG A+ + E C+D P P + A R+++RRFDE L++EVE++
Sbjct: 8 PNAQALVKGIAPPPDFGKKKDLPTKKITNIQEAQEYGAQREATLF-------DKQDGNFSVTKEGDRYRDVRIGTGAEVKPGSEVEIKYRVLRLGKRSRDGLSGEASLVFSYGYGEDDDKETDTLKFVVGEANLINALSSSLPGMKQGGLRRISVKPERGWKLEDASCVKSVDIGSAVGLPGGAVTEAETCLDYFRVPSPATFQAKRKLSRRFDENLLMEVEVI 224
BLAST of mRNA_P-littoralis_Contig124.2.1 vs. uniprot
Match: A0A6U4XZ85_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4XZ85_HEMAN) HSP 1 Score: 189 bits (481), Expect = 1.950e-51 Identity = 101/224 (45.09%), Postives = 145/224 (64.73%), Query Frame = 1
Query: 118 ASALVKGNAPPPGYNKKRGSGSGNGEREATPTAGAVPGD--------DDPSRTFSVTKSGIRFKDLKIGDGAEVTPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVGAVDEAIVGMRVGGVRRVAVRPERGWKKLDP-KCATEIDMGVMSGVPGAALAKVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGAKE 762
A ALVKG APP GY K++ G E++ T A+ ++ + F T SG R++D+K+G GAEV VD++YRV +LGKRS DG+ GE + S GYGEDDDKE D T+ +G LV A++E+I+G++ GGVRRV+VRPERGW+ D +C ID+G + G+PGA++ + ++C+D P P + A R++ RRFDET++VEVE+V +E
Sbjct: 86 AEALVKGVAPPEGYGKRKEKAEG--EKKITNKQDALEAGAKKEAEMFENQATDFEKTPSGDRYRDMKVGTGAEVVTGKEVDIKYRVLRLGKRSRDGLGGEASLIMSYGYGEDDDKETDFKTITVGQTPLVLALEESILGIKEGGVRRVSVRPERGWRLPDSSQCGAAIDVGTVLGLPGASVTEADNCLDTNRVPSPTTFQAKRKLGRRFDETVLVEVEVVAVRE 307
BLAST of mRNA_P-littoralis_Contig124.2.1 vs. uniprot
Match: A0A7S1E5E0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E5E0_HEMAN) HSP 1 Score: 178 bits (451), Expect = 2.780e-48 Identity = 85/171 (49.71%), Postives = 121/171 (70.76%), Query Frame = 1
Query: 253 FSVTKSGIRFKDLKIGDGAEVTPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVGAVDEAIVGMRVGGVRRVAVRPERGWKKLDP-KCATEIDMGVMSGVPGAALAKVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGAKE 762
F T SG R++D+K+G GAEV VD++YRV +LGKRS DG+ GE + S GYGEDDDKE D T+ +G LV A++E+I+G++ GGVRRV+VRPERGW+ D +C ID+G + G+PGA++ + ++C+D P P + A R++ RRFDET++VEVE+V +E
Sbjct: 47 FEKTPSGDRYRDMKVGTGAEVVTGKEVDIKYRVLRLGKRSRDGLGGEASLIMSYGYGEDDDKETDFKTITVGQTPLVLALEESILGIKEGGVRRVSVRPERGWRLPDSSQCGAAIDVGTVLGLPGASVTEADNCLDTNRVPSPTTFQAKRKLGRRFDETVLVEVEVVAVRE 217
BLAST of mRNA_P-littoralis_Contig124.2.1 vs. uniprot
Match: A0A812IG78_9DINO (Peptidylprolyl isomerase n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812IG78_9DINO) HSP 1 Score: 177 bits (449), Expect = 8.370e-47 Identity = 116/246 (47.15%), Postives = 150/246 (60.98%), Query Frame = 1
Query: 73 LLGVGTASGMAGVPPASALVKGNAPPPGYNKKRGSGSGNGEREATPTAGAVPGDD------------DPSRTFSVTKSGIRFKDLKIGDGAEVTPANVVD---MRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDV-LTVPLGAGRLVGAVDEAIVGMRVGGVRRVAVRPERG--WKKLDPKCATEID-MGVMSGVPGAALAKVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVG 753
LL +G A G AG+ A ALVKG+ PP GY G G G +EA ++ +TF VT SG R+KD+K+G+ A+ A V D +RYRV + GKRSYDG+SGE ++FSLGYGE DD++ D L PLG GR V A+DE +VGM VGG+RRV VRP+ G WKK KCA I +G ++G+P A K C+D +L P+P + A RR RRFDE+LIVE+E+VG
Sbjct: 78 LLVMGAAWG-AGLASAQALVKGSTPPKGY------GLGKGIKEAADCKSLAECEELGAKREEEKYGTKMEKTFKVTASGARWKDMKVGNEADGV-AKVGDDLKLRYRVMRAGKRSYDGVSGEATTLFSLGYGEGDDEKKDATLNAPLGTGRFVKAIDEGLVGMSVGGIRRVQVRPDYGLGWKKPG-KCAEAIGAVGAIAGLPAAGAEKESACLDTSLLPQPEDWNAKRRFERRFDESLIVEMELVG 314
BLAST of mRNA_P-littoralis_Contig124.2.1 vs. uniprot
Match: A0A7S1SCJ5_ALECA (Peptidylprolyl isomerase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SCJ5_ALECA) HSP 1 Score: 174 bits (440), Expect = 3.000e-46 Identity = 117/264 (44.32%), Postives = 152/264 (57.58%), Query Frame = 1
Query: 13 GEATGRGEFLSRAVISSTAALLGVGTASGMAGVPPASALVKGNAPPPGYNKKRGSGSGNGEREATP------TAGAVPGDDDPSRT--FSVTKSGIRFKDLKIG--DGAEVTPANVVDMRYRVEKLGKRSYDGISGETQSVFSLGYGEDDDKEGDVLTVPLGAGRLVGAVDEAIVGMRVGGVRRVAVRPERG--WKKLDPKCATEID-MGVMSGVPGAALAKVEDCIDLTLEPRPVGYGATRRMARRFDETLIVEVEMVGAKES 765
GEA GRG A++ ++ALL A G A A ALVKGNAPP GY G G E+ G D+ ++ + +T SG R+ D+ G + + P V ++YRV + GKRS DG+SGE +FSLGYGEDD + VLT P+G GR V A+DE +VGM VG RRV VRPE G W K + CA E+ +GV+ G+PG E CID + P+PV + + RR +RRFDE+LIVEVE+VG ES
Sbjct: 5 GEAEGRGRRA--ALVGCSSALLAAALAWGSA----ARALVKGNAPPSGY----GVGKNLTEKAECKFLADCQEIGRKKEDESFTKAVKYELTPSGARYYDMTPGSKEAGVIQPGTVARLKYRVMRQGKRSSDGLSGEASPIFSLGYGEDDGPKDAVLTAPVGTGRFVKALDEGLVGMAVGAKRRVQVRPESGLGWDK-EGNCAEEVKAVGVVGGIPGGGAQNEETCIDASKLPQPVDFASRRRFSRRFDESLIVEVELVGIGES 257 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig124.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig124.2.1 >prot_P-littoralis_Contig124.2.1 ID=prot_P-littoralis_Contig124.2.1|Name=mRNA_P-littoralis_Contig124.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=228bp MAGVPPASALVKGNAPPPGYNKKRGSGSGNGEREATPTAGAVPGDDDPSRback to top mRNA from alignment at P-littoralis_Contig124:57084..69410- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig124.2.1 ID=mRNA_P-littoralis_Contig124.2.1|Name=mRNA_P-littoralis_Contig124.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12327bp|location=Sequence derived from alignment at P-littoralis_Contig124:57084..69410- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig124:57084..69410- >mRNA_P-littoralis_Contig124.2.1 ID=mRNA_P-littoralis_Contig124.2.1|Name=mRNA_P-littoralis_Contig124.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=684bp|location=Sequence derived from alignment at P-littoralis_Contig124:57084..69410- (Pylaiella littoralis U1_48)back to top |