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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2570 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 2367 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789540.458909-UTR-P-littoralis_Contig124:196180..196368 | 1680789540.458909-UTR-P-littoralis_Contig124:196180..196368 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig124 196181..196368 - |
| 1680789540.4808779-UTR-P-littoralis_Contig124:198735..198750 | 1680789540.4808779-UTR-P-littoralis_Contig124:198735..198750 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig124 198736..198750 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789540.46993-CDS-P-littoralis_Contig124:196368..198735 | 1680789540.46993-CDS-P-littoralis_Contig124:196368..198735 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig124 196369..198735 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig124.26.1 >prot_P-littoralis_Contig124.26.1 ID=prot_P-littoralis_Contig124.26.1|Name=mRNA_P-littoralis_Contig124.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=789bp
MGAFNSIKMGQKCRNWAVESDAPVRACAISRDTSIEGVHGQPWIVNAATA
NRLQHVERESAVVLDGGPRWVLSTTLGFLTGGPLFTGVYLAAFVLIYSIM
FTHTANPPWMPRSDHLADTAEGTPPPDNVSAGTDDIPPAESSTGELAGII
AYMVLATALSVASVLDTNVPAGDSEWAGFTSGLLVEMLLCFTLLESVRIV
HSFFGDFFSDNASLLQSLDCGQWIVPAVIWKYASQLREQAIQAVRTKLAG
LWCRHPMGSRGVDEGQYHNLWDDWSEYVKRNARRVGGYNLLGFSASDVKN
LKASFPSQKASKVIERLGSSLVQDSNSTEEWIDRSNEIKLGYDARLRITG
PEDEGNIIRLEKVKGHIETLLRTGADVRVDSFQAKIESSDLKTQYGTEFL
TVLPKWFYAGALLADSDRRARRAESSGKYGPRFAVSISVLASGTDPLARL
NCYPASRFEESSVEPLKSAISMSAKALVSELAASAEVAFESDLLGEKRGV
AYATGDPSSLSYTPDEMTSACHLGETLVITDQTFSVDSNEIVFKSLWSES
GRVEKRVDVSDFLPPATSKNEEGIVLAGKSACLGWLCHFGFTLAILFAHL
FGSASTALVVIMLVAIPATDKRVSTHIDNHFHMVYTGIILNARFLSRWAS
LSPRGQASVDKAKRVREIGFVLVNILPFVACYAFSGWRWWIAFIPCVVAN
VPGLCNTIRMEWASAFNYKWVSWHVLNRWYLGRGYLKVPDLRMRLGRNVL
VVSVKNDANANVEQVTPPRGLEISDAKYLVVGGGRWTT* back to topmRNA from alignment at P-littoralis_Contig124:196181..198750- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig124.26.1 ID=mRNA_P-littoralis_Contig124.26.1|Name=mRNA_P-littoralis_Contig124.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2570bp|location=Sequence derived from alignment at P-littoralis_Contig124:196181..198750- (Pylaiella littoralis U1_48)
GTTGATGCACAAGTCATGGGAGCTTTTAACTCCATCAAGATGGGCCAAAA
GTGCAGGAACTGGGCTGTTGAATCGGATGCACCAGTCCGTGCTTGTGCGA
TTTCAAGAGACACCAGCATCGAAGGCGTCCATGGCCAGCCGTGGATTGTC
AATGCCGCCACTGCCAATCGCCTACAGCATGTAGAGAGAGAGTCGGCAGT
TGTTTTGGACGGCGGGCCGAGGTGGGTGCTGTCCACTACCCTCGGGTTTC
TGACTGGTGGACCATTGTTTACAGGGGTTTACTTGGCCGCTTTCGTGCTA
ATTTACTCAATCATGTTCACCCACACTGCGAATCCACCATGGATGCCTCG
CTCCGACCATCTCGCCGATACAGCAGAGGGGACACCACCGCCGGACAATG
TAAGCGCCGGTACCGACGATATTCCCCCAGCAGAATCCAGTACAGGAGAG
TTGGCCGGGATCATTGCGTACATGGTACTAGCGACGGCACTCTCAGTGGC
GTCCGTCCTTGACACAAATGTTCCTGCGGGTGATTCGGAGTGGGCAGGTT
TCACCTCAGGTCTTCTGGTCGAGATGCTTCTGTGTTTCACTTTGTTAGAG
AGCGTGCGTATCGTTCACAGTTTTTTTGGGGACTTTTTTTCCGACAACGC
AAGCTTGTTGCAATCCTTGGATTGTGGCCAATGGATCGTTCCCGCTGTGA
TATGGAAGTACGCTTCTCAATTGAGGGAACAGGCAATACAGGCGGTTAGA
ACAAAGTTGGCCGGTTTGTGGTGTCGTCACCCAATGGGGTCGAGAGGTGT
CGACGAAGGGCAGTATCACAATCTGTGGGATGACTGGTCAGAGTACGTCA
AGAGGAACGCCAGACGGGTGGGGGGCTACAATTTGTTGGGATTCTCAGCG
AGTGATGTAAAAAACTTGAAAGCCAGCTTTCCGAGCCAAAAGGCATCGAA
AGTAATCGAAAGGTTGGGGAGCAGCTTAGTGCAGGATAGTAACTCAACTG
AAGAATGGATTGACCGCTCAAATGAGATCAAGCTAGGGTATGATGCGAGG
CTCCGAATCACGGGTCCGGAGGATGAAGGTAACATCATCCGTTTAGAGAA
AGTTAAGGGACACATCGAGACTTTGTTGCGGACAGGTGCTGATGTTAGGG
TCGACTCTTTTCAGGCGAAAATAGAGAGTTCCGACCTAAAAACCCAATAC
GGGACCGAATTCCTCACGGTTCTCCCAAAATGGTTCTATGCAGGAGCCCT
TTTGGCAGATTCAGACCGAAGAGCGCGGAGGGCAGAGTCATCCGGAAAGT
ACGGCCCCCGTTTTGCGGTCTCTATATCGGTACTTGCATCAGGTACTGAC
CCGCTGGCGAGACTGAATTGCTATCCCGCAAGCAGATTCGAAGAGTCCAG
TGTGGAGCCGCTAAAATCGGCCATATCAATGAGTGCGAAGGCCCTCGTGT
CTGAATTAGCTGCTTCTGCTGAGGTAGCATTTGAGAGTGATTTGTTGGGA
GAGAAAAGAGGGGTAGCATATGCGACAGGTGATCCCTCCAGCCTGTCGTA
CACACCGGATGAGATGACGAGTGCTTGTCACTTGGGGGAGACACTTGTGA
TAACCGACCAAACCTTCTCGGTAGACTCGAATGAAATCGTTTTCAAGAGC
CTGTGGTCAGAGTCAGGACGAGTTGAAAAGAGGGTGGATGTGAGCGATTT
CTTACCCCCAGCGACTTCGAAAAATGAGGAAGGGATTGTGCTTGCAGGTA
AGAGTGCTTGCCTTGGATGGCTGTGCCACTTTGGATTTACGCTCGCCATC
CTATTTGCCCACCTTTTTGGTAGCGCCTCTACCGCTTTGGTAGTTATCAT
GCTCGTCGCTATCCCCGCCACCGACAAAAGAGTGAGCACTCACATAGACA
ACCACTTTCACATGGTCTACACAGGCATCATCTTGAATGCACGGTTTCTC
AGTCGGTGGGCGTCGCTTTCACCACGCGGCCAAGCGTCAGTGGACAAGGC
AAAGCGTGTTCGAGAAATTGGGTTTGTTCTAGTCAACATTTTGCCCTTTG
TCGCTTGCTACGCATTTAGCGGGTGGCGCTGGTGGATCGCTTTCATCCCC
TGCGTTGTAGCCAACGTGCCAGGGTTGTGCAACACCATTCGGATGGAATG
GGCATCCGCGTTCAATTACAAGTGGGTGTCGTGGCATGTCCTCAACAGGT
GGTACCTAGGACGTGGTTATCTCAAAGTACCGGACTTGAGGATGAGGCTA
GGAAGGAACGTGTTAGTAGTAAGCGTCAAGAACGATGCCAATGCGAACGT
AGAGCAAGTCACACCGCCCCGTGGATTGGAGATAAGCGACGCGAAATATT
TGGTTGTCGGTGGTGGAAGGTGGACGACGTAAATTTGCGCATGATCGTCG
CCCACTGCCGTAGAACAGGCCGGGAATTTTTGTGAAAAAGCTGATGTTTT
GCGAGACAAATAAACCTGGTCGATAAACTTGTAGCTTAATCGAGAGACGT
ATACTTCCAATGGAGGGTTCAAGCACTTTTGCCTTGGCCGGTTGAACGTT
CGATGTAGCGTTCTCCCTGT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig124:196181..198750- >mRNA_P-littoralis_Contig124.26.1 ID=mRNA_P-littoralis_Contig124.26.1|Name=mRNA_P-littoralis_Contig124.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2367bp|location=Sequence derived from alignment at P-littoralis_Contig124:196181..198750- (Pylaiella littoralis U1_48)
ATGGGAGCTTTTAACTCCATCAAGATGGGCCAAAAGTGCAGGAACTGGGC
TGTTGAATCGGATGCACCAGTCCGTGCTTGTGCGATTTCAAGAGACACCA
GCATCGAAGGCGTCCATGGCCAGCCGTGGATTGTCAATGCCGCCACTGCC
AATCGCCTACAGCATGTAGAGAGAGAGTCGGCAGTTGTTTTGGACGGCGG
GCCGAGGTGGGTGCTGTCCACTACCCTCGGGTTTCTGACTGGTGGACCAT
TGTTTACAGGGGTTTACTTGGCCGCTTTCGTGCTAATTTACTCAATCATG
TTCACCCACACTGCGAATCCACCATGGATGCCTCGCTCCGACCATCTCGC
CGATACAGCAGAGGGGACACCACCGCCGGACAATGTAAGCGCCGGTACCG
ACGATATTCCCCCAGCAGAATCCAGTACAGGAGAGTTGGCCGGGATCATT
GCGTACATGGTACTAGCGACGGCACTCTCAGTGGCGTCCGTCCTTGACAC
AAATGTTCCTGCGGGTGATTCGGAGTGGGCAGGTTTCACCTCAGGTCTTC
TGGTCGAGATGCTTCTGTGTTTCACTTTGTTAGAGAGCGTGCGTATCGTT
CACAGTTTTTTTGGGGACTTTTTTTCCGACAACGCAAGCTTGTTGCAATC
CTTGGATTGTGGCCAATGGATCGTTCCCGCTGTGATATGGAAGTACGCTT
CTCAATTGAGGGAACAGGCAATACAGGCGGTTAGAACAAAGTTGGCCGGT
TTGTGGTGTCGTCACCCAATGGGGTCGAGAGGTGTCGACGAAGGGCAGTA
TCACAATCTGTGGGATGACTGGTCAGAGTACGTCAAGAGGAACGCCAGAC
GGGTGGGGGGCTACAATTTGTTGGGATTCTCAGCGAGTGATGTAAAAAAC
TTGAAAGCCAGCTTTCCGAGCCAAAAGGCATCGAAAGTAATCGAAAGGTT
GGGGAGCAGCTTAGTGCAGGATAGTAACTCAACTGAAGAATGGATTGACC
GCTCAAATGAGATCAAGCTAGGGTATGATGCGAGGCTCCGAATCACGGGT
CCGGAGGATGAAGGTAACATCATCCGTTTAGAGAAAGTTAAGGGACACAT
CGAGACTTTGTTGCGGACAGGTGCTGATGTTAGGGTCGACTCTTTTCAGG
CGAAAATAGAGAGTTCCGACCTAAAAACCCAATACGGGACCGAATTCCTC
ACGGTTCTCCCAAAATGGTTCTATGCAGGAGCCCTTTTGGCAGATTCAGA
CCGAAGAGCGCGGAGGGCAGAGTCATCCGGAAAGTACGGCCCCCGTTTTG
CGGTCTCTATATCGGTACTTGCATCAGGTACTGACCCGCTGGCGAGACTG
AATTGCTATCCCGCAAGCAGATTCGAAGAGTCCAGTGTGGAGCCGCTAAA
ATCGGCCATATCAATGAGTGCGAAGGCCCTCGTGTCTGAATTAGCTGCTT
CTGCTGAGGTAGCATTTGAGAGTGATTTGTTGGGAGAGAAAAGAGGGGTA
GCATATGCGACAGGTGATCCCTCCAGCCTGTCGTACACACCGGATGAGAT
GACGAGTGCTTGTCACTTGGGGGAGACACTTGTGATAACCGACCAAACCT
TCTCGGTAGACTCGAATGAAATCGTTTTCAAGAGCCTGTGGTCAGAGTCA
GGACGAGTTGAAAAGAGGGTGGATGTGAGCGATTTCTTACCCCCAGCGAC
TTCGAAAAATGAGGAAGGGATTGTGCTTGCAGGTAAGAGTGCTTGCCTTG
GATGGCTGTGCCACTTTGGATTTACGCTCGCCATCCTATTTGCCCACCTT
TTTGGTAGCGCCTCTACCGCTTTGGTAGTTATCATGCTCGTCGCTATCCC
CGCCACCGACAAAAGAGTGAGCACTCACATAGACAACCACTTTCACATGG
TCTACACAGGCATCATCTTGAATGCACGGTTTCTCAGTCGGTGGGCGTCG
CTTTCACCACGCGGCCAAGCGTCAGTGGACAAGGCAAAGCGTGTTCGAGA
AATTGGGTTTGTTCTAGTCAACATTTTGCCCTTTGTCGCTTGCTACGCAT
TTAGCGGGTGGCGCTGGTGGATCGCTTTCATCCCCTGCGTTGTAGCCAAC
GTGCCAGGGTTGTGCAACACCATTCGGATGGAATGGGCATCCGCGTTCAA
TTACAAGTGGGTGTCGTGGCATGTCCTCAACAGGTGGTACCTAGGACGTG
GTTATCTCAAAGTACCGGACTTGAGGATGAGGCTAGGAAGGAACGTGTTA
GTAGTAAGCGTCAAGAACGATGCCAATGCGAACGTAGAGCAAGTCACACC
GCCCCGTGGATTGGAGATAAGCGACGCGAAATATTTGGTTGTCGGTGGTG
GAAGGTGGACGACGTAA back to top
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