mRNA_P-littoralis_Contig1239.4.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1239.4.1
Unique NamemRNA_P-littoralis_Contig1239.4.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1239.4.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 1.730e-72
Identity = 147/346 (42.49%), Postives = 193/346 (55.78%), Query Frame = 1
Query:    7 TFRKNFKRWYYKFLKRHRFSIRRKTT--------------ATAGDTVEIEI---------------EETPVA---VTAEELLSVQEDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGEKVKPRIIYKGTPF----VSKKTKKGL---------------------------GVQKASWCDTTQTDAWLTEEFMRRPR-ASGFSQPASILTLDDFKCHKNEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFEVCGLTLNLDGSEDH 852
             F+  F  WY +F KR+ FSIRR+T+              AT     E  +               +E+P+    +T+E+L SV+ +VF+ L NMDQTP+Q E+P ETT+ KTGAKDARI+TGGKEK R+T+VL+V  DG+KV PRII+KGTPF    VS K K  L                           GVQ+ SW D  + + W++  +  RP   S   Q   IL LDDFKCHK+E F   L   A T  + IPG LTP++QPLDR +NK+ KR +R KYT +          GK   P RGVV+TW K+ W + + +T+ +CF +CGLTL LDGSEDH
Sbjct:   26 AFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDH 371          
BLAST of mRNA_P-littoralis_Contig1239.4.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 9.430e-70
Identity = 149/367 (40.60%), Postives = 193/367 (52.59%), Query Frame = 1
Query:   31 WYYKFLKRHRFSIRRKTT--------------ATAGDTVEIEI---------------EETPVA---VTAEELLSVQEDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGEKVKPRIIYKGTPF----VSKKTKKGL---------------------------GVQKASWCDTTQTDAWLTEEFMRRPR-ASGFSQPASILTLDDFKCHKNEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILS-----------------------------CFEVCGLTLNLDGSEDH 852
            WY +F KR+ FSIRR+T+              AT     E  +               +E+P+    +T E+L SV+ +VFK L NMDQTP+Q EMP ETT+ KTGAKDARI+TGGKEK R+T+VL+V  DG+KV PRII+KGTPF    VS K K  L                           GVQ+ SW D  + + W++  +  RP   S   Q   IL LDDFKCHK+E +   L   A T  ++IPGGLTP++QPLDR +NK+ KR +R KYT +          GK   P RGVV+TW K+ W +I+ +T+ S                             CF++CGLTL LDGSEDH
Sbjct:   34 WYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDH 400          
BLAST of mRNA_P-littoralis_Contig1239.4.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 1.440e-69
Identity = 129/271 (47.60%), Postives = 167/271 (61.62%), Query Frame = 1
Query:  136 VTAEELLSVQEDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGEKVKPRIIYKGTPF----VSKKTKKGL---------------------------GVQKASWCDTTQTDAWLTEEFMRRPR-ASGFSQPASILTLDDFKCHKNEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFEVCGLTLNLDGSEDH 852
            +T+E+L SV+ +VF+ L NMDQTP+Q EMP ETT+ KTGAKDAR++TGG+EK R+T+VL+V  DG+KV  RII+ GTPF    VS K K  L                           GVQ+ SW D  + + W +  +  RP   S   Q   IL LDDFKCHK+E F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R+KYT +     D    GK   P RGVV+TW K  W +I+ +T+ +CF++CGLTL LDGSEDH
Sbjct:   35 LTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARS-GKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDH 304          
BLAST of mRNA_P-littoralis_Contig1239.4.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 2.120e-67
Identity = 151/373 (40.48%), Postives = 194/373 (52.01%), Query Frame = 1
Query:    7 TFRKNFKRWYYKFLKRHRFSIRRKTT----------------------ATAGDTVEIEIEETPVA-----VTAEELLSVQ-----EDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATG--------------------------GKEKLRYTVVLSVRGDGEKVKPRIIYKGTPFV------------------------SKKTKKGL-------GVQKASWCDTTQTDAWLTEEFMRRPR-ASGFSQPASILTLDDFKCHKNEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT-HWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFEVCGLTLNLDGSEDH 852
             F+  FK WY +F KR++FSIRR+T+                      A      EI  +  P A     +  E+L S Q     +++FK L NMDQTP+Q EMP ETT+ KTGAKDARIATG                          GKEK R+T+ L+V  DG KV  RII+KGTPFV                        + ++K GL       GVQ+ SWCD  +   W+ + +  RP   S   Q   IL LDDFKCHK++ F   L  +A T  + IPGGLTP++QPLDR +NK+ KR +R  YT H  K   D    GK   P RG VATW K+ WA+I+ +T+ +CF++CGLTL LDGSEDH
Sbjct:  113 AFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPK-TGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDH 484          
BLAST of mRNA_P-littoralis_Contig1239.4.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 1.650e-66
Identity = 140/346 (40.46%), Postives = 191/346 (55.20%), Query Frame = 1
Query:   10 FRKNFKRWYYKFLKRHRFSIRRKTT--------------ATAGDTVEIEI---------------EETPVA---VTAEELLSVQEDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGG-KEKLRYTVVLSVRGDGEKVKPRIIYKGTPFV------------------------SKKTKKG-------LGVQKASWCDTTQTDAWLTEEFMRRPR-ASGFSQPASILTLDDFKCHKNEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFEVCGLTLNLDGSEDH 852
            F+  F  WY +F KR+ FSIRR+T+              AT     E  +               +E+P+    + +E+L SV+ +VF+ + NMDQ P+Q EMP ETT+ KTGAKDARI+TGG  EK R+T+VL+V  DG+KV PRII++GTPF+                        + + K G        GVQ+ SW D  + + W++  +  RP   S   Q   IL LDDFKCH +E F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R KYT +          GK   P RGVV+TW K+ W +I+ +T+ +C ++CGLTL LDGSEDH
Sbjct:  221 FKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDH 566          
BLAST of mRNA_P-littoralis_Contig1239.4.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 7.450e-65
Identity = 140/354 (39.55%), Postives = 187/354 (52.82%), Query Frame = 1
Query:    7 TFRKNFKRWYYKFLKRHRFSIRRKTT--------------ATAGDTVEIEI---------------EETPVA---VTAEELLSVQEDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGEKVKPRIIYKGTPF----VSKKTKKGL---------------------------GVQKASWCDTTQTDAWLTEEFMRRPRASGFSQPAS---------ILTLDDFKCHKNEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFEVCGLTLNLDGSEDH 852
             F+  F  WY +F KR+ FSIRR+ +              AT     E  +               +E+P+    +T+E+  SV+ +VF+ L NMDQTP+Q EMP ETT+  TG KDARI+TGGKEK R+T+VL+V  DG+ V P II+KGTPF    VS K K  L                           GVQ+ SW    + + W+   +   P      +P +         IL LDDFKCHK+E F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R KYT +          GK   P RGVV+TW K+ W  ++ +T+ +CF++CGLTL LDGSEDH
Sbjct:  180 AFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDH 533          
BLAST of mRNA_P-littoralis_Contig1239.4.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 9.380e-65
Identity = 145/359 (40.39%), Postives = 190/359 (52.92%), Query Frame = 1
Query:    7 TFRKNFKRWYYKFLKRHRFSIRRKTT--------------ATAGDTVEIEI---------------EETPVA---VTAEELLSVQEDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGEKVKPRIIYKGTPF----VSKKTKKGLGVQKA----------------------------------------SWCDTTQTDAWLTEEFMRRPR-ASGFSQPASILTLDDFKCHKNEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFEVCGLTLNLDGSEDH 852
             F+  F  WY +F KR+ FSIRR+T+              AT     E  +               +E+P+    +T+E+L SV+ +VF+ L NMDQTP+Q EMP ETT+ KTGAKDARI+TGG+EK R+T+VL+V  DG+KV PRII+KGTPF    VS K K  L  + +                                        SW D  + + W+   +  RP   S   Q   IL LDDFKCHK+E F   L   AKT  + IPGGLT ++QPLDR +NK+ KR +R KYT            GK   P  GVV+TW K+ W +I+ KT+ +CF++CGLTL LDGSE H
Sbjct:  208 AFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHH 565          
BLAST of mRNA_P-littoralis_Contig1239.4.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 6.980e-64
Identity = 117/252 (46.43%), Postives = 149/252 (59.13%), Query Frame = 1
Query:  193 MDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGEKVKPRIIYKGTPF----VSKKTKKGL---------------------------GVQKASWCDTTQTDAWLTEEFMRRPR-ASGFSQPASILTLDDFKCHKNEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFEVCGLTLNLDGSEDH 852
            MDQTP+Q EMP ETT+ KTGAKDARI+TGGKE+ R+ +VL+V  DG+KV PRI +KGTPF    VS K K  L                           GVQ+ SW D  + + W++  +  RP   S   Q   IL LDDFK HK+E F   L   A T  + IPGGLTP++QPLD  +NK+ KR +R KY  +          GK   P RGVV+TW K+ W +I+ +T+ +CF++CGLTL LDGSEDH
Sbjct:    1 MDQTPVQHEMPVETTLEKTGAKDARISTGGKEQERFALVLAVMADGKKVSPRITFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKYIAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDH 252          
BLAST of mRNA_P-littoralis_Contig1239.4.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 1.120e-61
Identity = 140/334 (41.92%), Postives = 183/334 (54.79%), Query Frame = 1
Query:   22 FKRWYYKFLKRHRFSIRRKTT----------------------ATAGDTVEIEIEETPVA-----VTAEELLSVQ-----EDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGEKVKPRIIYKGTPFV------------------------SKKTKKGL-------GVQKASWCDTTQTDAWLTEEFMRRPR-ASGFSQPASILTLDDFKCHKNEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT-HWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFEVCGLTL 828
            FK WY +F KR++FSIRR+T+                      A      EI  +  P A     +  E+L S Q     +++F+ L NMDQTP+Q EMP ETT+  TGAKDARIATGGKEK R+T+ L+V  DG+KV  RII+KGTPFV                        + ++K GL       GVQ+ SWCD  +   W+ + +  RP   S   Q   IL LDDFKCHK++ F   L  +A T  + IPGGL P+ QPLDR +NK+ KR +R  YT H  K   D    GK V P RG VATW K+ WA+I+ + + +CF++CGLTL
Sbjct:  185 FKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPK-TGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517          
BLAST of mRNA_P-littoralis_Contig1239.4.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 1.770e-61
Identity = 139/345 (40.29%), Postives = 178/345 (51.59%), Query Frame = 1
Query:    7 TFRKNFKRWYYKFLKRHRFSIRRKT----------------------TATAGDTVEIEIEETPVA----------VTAEELLSVQEDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGEKVKPRIIYKGTPFVSKKT---------KKG----------------------LGVQKASWCDTTQTDAWLTEEFMRRPR-ASGFSQPASILTLDDFKCHKNEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFEVCGLTLNLDGSED 849
             FR  FK WY++F +RH  SIRR+T                      TA      EI     P A          ++  +L SV  +VF+ L NMDQTP+Q EMP ETT+ K GAKDARI+TGGKEK R+T+ L+V  DG KV  RII+KG PF+   T         +KG                       GVQ+ SW D  +   WL+E +  RP   S   Q  SIL LDDF              +  T  ++IPGGLTP++QPLDR ++KE KR MR +YT ++         GK   P RG+V+TW K+ WA I+ +T+  CF+VCGLTL LDGSED
Sbjct:  199 AFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDF--------------RTNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSED 529          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1239.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L9_9PHAE1.730e-7242.49DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE9.430e-7040.60DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE1.440e-6947.60DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE2.120e-6740.48DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.650e-6640.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE7.450e-6539.55DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE9.380e-6540.39DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KT06_9PHAE6.980e-6446.43DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE1.120e-6141.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM5_9PHAE1.770e-6140.29DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1239contigP-littoralis_Contig1239:34648..36565 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size936
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons5
Evalue7.08e-49
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size936
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789540.1936588-CDS-P-littoralis_Contig1239:34647..347291680789540.1936588-CDS-P-littoralis_Contig1239:34647..34729Pylaiella littoralis U1_48CDSP-littoralis_Contig1239 34648..34729 +
1680789540.2051234-CDS-P-littoralis_Contig1239:34858..350611680789540.2051234-CDS-P-littoralis_Contig1239:34858..35061Pylaiella littoralis U1_48CDSP-littoralis_Contig1239 34859..35061 +
1680789540.214711-CDS-P-littoralis_Contig1239:35629..357381680789540.214711-CDS-P-littoralis_Contig1239:35629..35738Pylaiella littoralis U1_48CDSP-littoralis_Contig1239 35630..35738 +
1680789540.2273698-CDS-P-littoralis_Contig1239:35828..362881680789540.2273698-CDS-P-littoralis_Contig1239:35828..36288Pylaiella littoralis U1_48CDSP-littoralis_Contig1239 35829..36288 +
1680789540.237621-CDS-P-littoralis_Contig1239:36483..365651680789540.237621-CDS-P-littoralis_Contig1239:36483..36565Pylaiella littoralis U1_48CDSP-littoralis_Contig1239 36484..36565 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1239.4.1prot_P-littoralis_Contig1239.4.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1239 34648..36565 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1239.4.1

>prot_P-littoralis_Contig1239.4.1 ID=prot_P-littoralis_Contig1239.4.1|Name=mRNA_P-littoralis_Contig1239.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=312bp
METFRKNFKRWYYKFLKRHRFSIRRKTTATAGDTVEIEIEETPVAVTAEE
LLSVQEDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRY
TVVLSVRGDGEKVKPRIIYKGTPFVSKKTKKGLGVQKASWCDTTQTDAWL
TEEFMRRPRASGFSQPASILTLDDFKCHKNEAFQQKLASKAKTEAVMIPG
GLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVA
TWVKDVWANISVKTILSCFEVCGLTLNLDGSEDHDEFDDSDDDCCAVDLV
DLVDSDSEEEEE
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mRNA from alignment at P-littoralis_Contig1239:34648..36565+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1239.4.1 ID=mRNA_P-littoralis_Contig1239.4.1|Name=mRNA_P-littoralis_Contig1239.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1918bp|location=Sequence derived from alignment at P-littoralis_Contig1239:34648..36565+ (Pylaiella littoralis U1_48)
ATGGAAACCTTCCGGAAGAACTTCAAGAGGTGGTACTACAAGTTCCTCAA GAGGCACCGGTTCTCGATCCGTCGCAAGACAAGTGTCGGGCAGAAGAAGC TGGAGGGTTGGGAGGGGAAGGCATGGGCCTTCATCCAGCAGCTGCGCTCG ATACTGCTTCGCCATGCCAAGGAAGCCGTTGCCGCGAACAGGACAGCGGC AAAGGCGGCAGCGGCAACGGCGGGAGACACGGTCGAGATCGAGATCGAAG AGACCCCAGTGGCGGTGACTGCGGAGGAACTTTTGAGCGTGCAGGAGGAC GTGTTCAAGCTGCTCTACAACATGGACCAGACACCCATCCAAGCAGAGAT GCCGCAAGAGACCACGATCGCCAAGACTGGTGCGAAGGACGCTCGCATCG CGACAGGAGGTAAGGTCTTGCTTGTGCGTCAATTCAGATAACAACGATGA CTCAAAAACCCTCTCGGGACGAAAGTTCTCACTTTGCCAAAAAATCAGAA AATTGAAGTGTGGCGACTTGCCAAAAATTCAGAATATAGAAGTGCGGCGA CTTTTGTTTGAAATTATTTTTTTGTTTTTGCCGTCACCTCTCTCTCTCTC TCTCTCCCCCTCTCTTCCTCGCTCTCTGGAACAATGTCGTTCCTTCTTCG TTCCTTCATCGTGATATGATGTATCCACGTTGTTGACAGTAACGGTCGCA ATGCATAATAGGTAAAATAATCAATACATGACACCACCGTCTTGCCTGCG TCTTGCCGTCTGTGCATGTTTATTATTTTTATTATGTGTTCAATTATGCA TATTGTTTTACAATTAATAATATCAATGTACGAGTACTCTGTTCACCTTT TTGGCGCTGACTGTGTTGGTTGTACCGTCTTTGTTTTAAATACACAACCT TTTGTCCAAATACCGTATGTTGCTCACTTGCCTTTATCGTCCCCTCTCCT CAATCTGCTGTAATTTATTATGATCAGGGAAGGAGAAGCTGAGGTACACC GTGGTGTTATCTGTGCGTGGTGACGGGGAGAAGGTGAAGCCTCGCATCAT CTACAAGGGCACCCCGTTCGTCTCCAAGAAGACCAAGAAGGGTGCGTCGA CCAAGCCAGGCATGAACACTCTGACGTGCCAGCACATGCCGGCCAACCGA ACGCAGTTCGACTACCCGGCGGGCGGCGTAGGCCTCGGGGTGCAGAAGGC TTCATGGTGCGACACGACCCAGACCGACGCGTGGCTAACGGAGGAGTTCA TGCGCCGCCCCCGCGCCAGCGGTTTCTCTCAGCCGGCCAGCATTCTCACG CTGGACGACTTCAAGTGCCACAAGAACGAAGCGTTCCAGCAGAAGCTGGC AAGCAAGGCTAAGACGGAGGCGGTGATGATTCCTGGCGGGCTGACGCCGG TGGTCCAGCCGCTCGACCGCAGCATCAACAAGGAGTTCAAGCGTGGGATG AGGGCCAAGTACACCCACTGGGTGAAGGACGAGTTCGACCGCAATGGGCC TGGCAAGGCAGTGGCGCCGAGCAGGGGGGTGGTGGCGACGTGGGTGAAGG ATGTGTGGGCGAACATCTCGGTGAAGACGATCCTGTCGTGCTTCGAGGTG TGCGGCCTCACCCTCAACCTGGACGGCAGCGAGGACCACGAGTGGTGCAT CCACACCTTCGGCGAGGGGTACCGCGAGGTCCTTGTCGAGCAGCGGGTGG TGTGGGAGCAAGCGCACGGCAAGGAACTGGAGCCTCTTCAGCTGCCGGTC GTTCCCGAGGGTGGTGGAGGAGGGGCAGCGGGCGTGGTCACGGTCACGGC AGCAGTAGAGGAGGTCCAAGCTTCCCTGGCACCCAGCGAGTTCGACGACT CAGACGACGACTGCTGCGCAGTCGACCTAGTCGACCTCGTCGACTCGGAC TCGGAGGAAGAAGAGGAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1239:34648..36565+

>mRNA_P-littoralis_Contig1239.4.1 ID=mRNA_P-littoralis_Contig1239.4.1|Name=mRNA_P-littoralis_Contig1239.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=936bp|location=Sequence derived from alignment at P-littoralis_Contig1239:34648..36565+ (Pylaiella littoralis U1_48)
ATGGAAACCTTCCGGAAGAACTTCAAGAGGTGGTACTACAAGTTCCTCAA
GAGGCACCGGTTCTCGATCCGTCGCAAGACAACGGCAACGGCGGGAGACA
CGGTCGAGATCGAGATCGAAGAGACCCCAGTGGCGGTGACTGCGGAGGAA
CTTTTGAGCGTGCAGGAGGACGTGTTCAAGCTGCTCTACAACATGGACCA
GACACCCATCCAAGCAGAGATGCCGCAAGAGACCACGATCGCCAAGACTG
GTGCGAAGGACGCTCGCATCGCGACAGGAGGTAAGGAGAAGCTGAGGTAC
ACCGTGGTGTTATCTGTGCGTGGTGACGGGGAGAAGGTGAAGCCTCGCAT
CATCTACAAGGGCACCCCGTTCGTCTCCAAGAAGACCAAGAAGGGCCTCG
GGGTGCAGAAGGCTTCATGGTGCGACACGACCCAGACCGACGCGTGGCTA
ACGGAGGAGTTCATGCGCCGCCCCCGCGCCAGCGGTTTCTCTCAGCCGGC
CAGCATTCTCACGCTGGACGACTTCAAGTGCCACAAGAACGAAGCGTTCC
AGCAGAAGCTGGCAAGCAAGGCTAAGACGGAGGCGGTGATGATTCCTGGC
GGGCTGACGCCGGTGGTCCAGCCGCTCGACCGCAGCATCAACAAGGAGTT
CAAGCGTGGGATGAGGGCCAAGTACACCCACTGGGTGAAGGACGAGTTCG
ACCGCAATGGGCCTGGCAAGGCAGTGGCGCCGAGCAGGGGGGTGGTGGCG
ACGTGGGTGAAGGATGTGTGGGCGAACATCTCGGTGAAGACGATCCTGTC
GTGCTTCGAGGTGTGCGGCCTCACCCTCAACCTGGACGGCAGCGAGGACC
ACGACGAGTTCGACGACTCAGACGACGACTGCTGCGCAGTCGACCTAGTC
GACCTCGTCGACTCGGACTCGGAGGAAGAAGAGGAG
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