mRNA_P-littoralis_Contig1238.2.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1238.2.1
Unique NamemRNA_P-littoralis_Contig1238.2.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1238.2.1 vs. uniprot
Match: A0A6H5L7I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7I1_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 2.510e-114
Identity = 192/366 (52.46%), Postives = 250/366 (68.31%), Query Frame = 3
Query:  636 VGTVFIAKGLGTGVGAMISPKVYLSMRGNSALSVGLLLLAAALLAMPYVSTVLILHLVYFMLGVLFDIITMGCQIMTRRVHGDKSGIWIGTNLAVLGGASALATLICYVDTSLFQQFAMTSATSLSAAVYLGIALPAPEKFEGFLEATPKFLSGSAAAVEELISRSSSMKGKCSLFFQKYSVEIHISGMLFSLSGGMATAGAYLYTYVEYTDIIPESQEPLLMVDFWVSSAVGIVAGLFDQRTCTLPSLYRHSTVAFLTAGAVGSAILVFRDSVVVLWVFIGLFGLACGPMMGYTFELNNRISVPSATGMSIVTFGLSFGSVAVPYATSFVLDYTGSAAVFIVINVLSRLVPYPLMLNAKRITESR 1733
            VGTVF+AKG GTGVGA++SPK+YLS+RGN+ LSVGL+LL+A L   P++S+V  LHL +F+ G++ +I+  GCQIMTR+VHGDK  +W G N+  LG +SAL  ++ Y+D SLF  +A+ S  S++ AV LG+ +PAPE FEG +E TP+      AA        S+   KCSLF+ KY VE +I  M+  L GG +   +YL TYVE T +IP SQE LL VD + +S VGI+ GL  Q  CTL SLYR S  AFL  GA  +AIL+F+DS  V WV I  +G A GP + + +ELNN I+ PS +GMS++TFGL+FG  A PYATS VLDYTG A   +VI + S LVP  L+LN  RI ES+
Sbjct:    9 VGTVFVAKGAGTGVGALMSPKLYLSVRGNTVLSVGLVLLSAILSYFPFLSSVFTLHLAFFIQGLVVNILMTGCQIMTRKVHGDKCNLWTGANVVSLGLSSALFPVVAYLDDSLFDLYAILSGMSIAVAVILGVVIPAPESFEGLIEETPESFVVDPAAGGMEPPEKSTWTRKCSLFYSKYRVEFNIGAMVLWLIGGTSATSSYLGTYVESTGVIPTSQESLLQVDLFAASVVGILLGLLAQLYCTLSSLYRWSMAAFLLGGAGVAAILLFQDSPTVFWVCIASYGFAWGPTVNFCYELNNHINPPSESGMSVITFGLTFGMAAFPYATSLVLDYTGVAQWLMVIVLASMLVPGLLLLNIMRIVESK 374          
BLAST of mRNA_P-littoralis_Contig1238.2.1 vs. uniprot
Match: D7FZ10_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ10_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 1.270e-104
Identity = 185/372 (49.73%), Postives = 249/372 (66.94%), Query Frame = 3
Query:  636 VGTVFIAKGLGTGVGAMISPKVYLSMRGNSALSVGLLLLAAALLAMPYVSTVLILHLVYFMLGVLFDIITMGCQIMTRRVHGDKSGIWIGTNLAVLGGASALATLICYVDTSLFQQFAMTSATSLSAAVYLGIALPAPEKFEGFLEATPKFLSGSAAAVEELISRSSSMKGKCSLFFQKYSVEIHISGMLFSLSGGMATAGAYLYTYVEYTDIIPESQEPLLMVDFWVSSAVGIVAGLFDQRTCTLPSLYRHSTVAFLTAGAVGSAILVFRDSVVVLWVFIGLFGLACGPMMGYTFELNNRISVPSATGMSIVTFGLSFGSVAVPYATSFVLDYTGSAAVFIVINVLSRLVPYPLMLNAKRITESRTRRGRE 1751
            VG+VFIA+G+G  +GA++S K+YL MRGN+ +S+ LLLL + L+ MP++++V  LH  +F+LG+   I   GCQIMTR++HG K+G W+G N  V G + AL  LI Y+  SLF Q+ + SA S + AV++ I LPAPEK+EG LE   K        V  +   SS+   K + F+++Y +E HISGM+F L GG   A AYL +YV+ TD+I ES   LL+V  W +  +G +AGL DQR  TLP LYRHST+ FL   A  +AILVF+ S  VLW  I  +GL  GP +GY ++LNNR+++PS  GMS+V FGL+FG+  VPY  S+V DYT      IVI +LS L+PYPLMLNAKRI E+  R+ RE
Sbjct:   91 VGSVFIARGVGAVLGAVVSSKLYLWMRGNNVMSIILLLLTSVLIYMPFITSVYTLHFSFFVLGLCTAITDTGCQIMTRKLHGAKAGPWLGANTVVFGISGALVPLIGYLTGSLFVQYVILSAVSCATAVFM-IILPAPEKYEGLLEERKKMPERREENVG-VPGESSTSICKMAAFYRRYKIEFHISGMVFCLIGGKVGATAYLESYVDDTDVIDESHAELLIVVLWTAITIGRLAGLQDQRHLTLPRLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGLYNGPTVGYCYDLNNRVTMPSEMGMSVVMFGLNFGASIVPYVISWVWDYTDWPETLIVIIMLSHLLPYPLMLNAKRIDEANKRKLRE 460          
BLAST of mRNA_P-littoralis_Contig1238.2.1 vs. uniprot
Match: D7G4N2_ECTSI (Similar to sodium-dependent glucose transporter 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4N2_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 7.140e-79
Identity = 158/378 (41.80%), Postives = 219/378 (57.94%), Query Frame = 3
Query:  636 VGTVFIAKGLGTGVGAMISPKVYLSMRGNSALSVGLLLLAAALLAMPYVSTVLILHLVYFMLGVLFDIITMGCQIMTRRVHGDKSGIWIGTNLAVLGGASALATLICYVDTSLFQQFAMTSATSLSAAVYLGIALPAPEK----FEGFLEATPKFLSGSAAAVEELISRSSSMKGKCSL--FFQKYSVEIHISGMLFSLSGGMATAGAYLYTYVEYTDIIPESQEPLLMVDFWVSSAVGIVAGLFDQRTCTLPSLYRHSTVAFLTAGAVGSAILVFRDSVVVLWVFIGLFGLACGPMMGYTFELNNRISVPSATGMSIVTFGLSFGSVAVPYATSFVLDYTGSAAVFIVINVLSRLVPYPLMLNAKRITESRTRRGRE 1751
            V  V IA+G+G  +G   S K+YL +  N  +SV LLL+   L+ MP++++V  L++ + +LG+   I   GCQIMTR++HG ++G W+G N    G +  +  LI Y+  SLF  +   S  S   AV+L I LP P +     EG  +  P   +G         SR  S    C L  FF KY +E HISGMLF L  G   A  YL  YV+ T++I ES   LL+V  W++  +G +AG+ DQR  TL  LYRHST+ FL      +AILVF++S  VLW  I  +GL  GP +GY ++LNNR++ PS  G S+   G +FG+   PY  S+V DYT    + I++ +LS L+PYP MLNAKRI E+  RR R+
Sbjct:   35 VRPVLIARGVGAVLGTAASSKLYLWVPSNKMMSVFLLLVMVVLVYMPFITSVYPLYVAFLLLGLFTAITDTGCQIMTRKLHGAEAGPWMGANALAFGLSGVIVPLIGYLTGSLFVVYVTLSVVSCVTAVFLTI-LPTPGRNNRLHEGERQPIPAQRAGDGGG-----SREESQASACKLTTFFLKYKIEFHISGMLFWLFSGEVGAAGYLKRYVDETEVIGESHAELLVVVLWMAIIIGRLAGIQDQRHLTLSRLYRHSTILFLGGTTAATAILVFQNSAFVLWTGIAAYGLCDGPTVGYCYDLNNRMATPSEMGTSVAMLGQNFGASIAPYVISWVWDYTDWPQILILVILLSHLLPYPFMLNAKRIDEANKRRLRQ 406          
BLAST of mRNA_P-littoralis_Contig1238.2.1 vs. uniprot
Match: A0A836CPE2_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPE2_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.200e-69
Identity = 148/374 (39.57%), Postives = 208/374 (55.61%), Query Frame = 3
Query:  600 EHTPRVAKQK*TVGTVFIAKGLGTGVGAMISPKVYLSMRGNSALSVGLLLLAAALLAMPYVSTVLILHLVYFMLGVLFDIITMGCQIMTRRVHGDKSGIWIGTNLAVLGGASALATLICYVDTSLFQQFAMTSATSLSAAVYLGIALPAPEKFEGFLEATPKFLSGSAAAVEELISRSSSMKGKCSLFFQKYSVEIHISGMLFSLSGGMATAGAYLYTYVEYTDIIPESQEPLLMVDFWVSSAVGIVAGLFDQRTCTLPSLYRHSTVAFLTAGAVGSAILVFRDSVVVLWVFIGLFGLACGPMMGYTFELNNRISVPSATGMSIVTFGLSFGSVAVPYATSFVLDYTGSAAVFIVINVLSRLVPYPLMLNAKRI 1721
            EH  RV+    T+G+VFIA+G G   GA+ S ++Y +  GN+ +   LL L+A LL +PYV+ V  LH  +  LG+   +   GCQIMTRR HG ++G W+G N    G + AL   I Y    L  Q+A+ SA  +SAA+   IALP PEK  GF+   P                 S ++G    F   Y +E  I  M+F L GG   A AYL  YV  T IIP+++ PLL+   W++  VG + G+  QRT TL  L++     F+   A  +  LV   S   LW+ + L+G   GP +GY ++LNNRI+ PS TGMSIV FGL+ GS  +P+A S + D T   ++  V  V+S L+P+P +L A+R+
Sbjct:   75 EHCGRVST---TIGSVFIARGFGAVFGAVASAQLYRAFHGNTVIVWALLALSALLLWLPYVTNVWALHGAFLCLGLCTAVTDTGCQIMTRRAHGCRAGPWLGANTVAFGLSGALVPCISYATDRLIIQYALMSAMGVSAAIAF-IALPTPEKQRGFIGKRPXXXXXXXXXXXG----GSGLRG----FVYLYRIEFTIGFMIFWLIGGKVGATAYLTQYVADTGIIPDARAPLLIAVLWLAITVGRILGIQAQRTITLSKLHKQCAGLFIGGAAAAALPLVLLHSAAALWIAVALYGTLNGPCVGYCYDLNNRITFPSETGMSIVMFGLNCGSSFIPFAISGLWDATQWPSILFVFLVVSHLLPFPALLTARRL 436          
BLAST of mRNA_P-littoralis_Contig1238.2.1 vs. uniprot
Match: H6WBB1_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB1_VAULI)

HSP 1 Score: 229 bits (585), Expect = 2.410e-65
Identity = 139/361 (38.50%), Postives = 204/361 (56.51%), Query Frame = 3
Query:  636 VGTVFIAKGLGTGVGAMISPKVYLSMRGNSALSVGLLLLAAALLAMPYVSTVLILHLVYFMLGVLFDIITMGCQIMTRRVHGDKSGIWIGTNLAVLGGASALATLICYVDTSLFQQFAMTSATSLSAAVYLGIALPAPEKFEGFLEATPKFLSGSAAAVEELISRSSSMKGKCSLFFQKYSVEIHISGMLFSLSGGMATAGAYLYTYVEYTDIIPESQEPLLMVDFWVSSAVGIVAGLFDQRTCTLPSLYRHSTVAFLTAGAVGSAI-LVFRDSVVVLWVFIGLFGLACGPMMGYTFELNNRISVPSATGMSIVTFGLSFGSVAVPYATSFVLDYTGSAAVFIVINVLSRLVPYPLMLNAK 1715
            VG+VFIA+G G   GA+ S K+Y S+ GN  +   +L + A LL +P++STV+ LH+ + +LGV   +   GCQIMTRR+HG  +G W+G N    G + AL   I Y  + L  Q+A+ SA  + AA    I LP PEK EG++   P   S        L+            F   Y +E  +  M+F L GG   A AYL  YV  TDII ESQ   L+   W++  VG + G+  QR   L  L+  + +AFL  GAVG+ + L+ + S++ LW+ + ++G   GP +G+ ++LNNR ++P  TGMSIV FGL+ G+  +P+A S + D   + ++  ++ V S L+PYP ML  K
Sbjct:   91 VGSVFIARGFGAICGAVTSAKLYQSINGNIVILWTILGMCAILLYLPFISTVISLHIAFMILGVSTAVTDTGCQIMTRRIHGTGAGPWLGANTVAFGLSGALVPCISYATSLLIVQYAIMSAIGIFAASSF-IILPNPEKLEGYINKKPNKKSEGKNYAHNLLE-----------FVHNYRIEFCVGFMVFWLIGGKVGATAYLTQYVSDTDIISESQSAGLIAVLWMAITVGRLFGIHIQRNIILSRLFFLTGIAFL-GGAVGAFLPLILKTSILALWLSVAIYGFLNGPTVGFCYDLNNRTTMPCETGMSIVMFGLNCGASFIPFAISGIWDKFHTPSILFIVMVASHLLPYPAMLIMK 438          
BLAST of mRNA_P-littoralis_Contig1238.2.1 vs. uniprot
Match: A0A7S3UWT4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWT4_HETAK)

HSP 1 Score: 225 bits (573), Expect = 2.970e-63
Identity = 143/367 (38.96%), Postives = 204/367 (55.59%), Query Frame = 3
Query:  636 VGTVFIAKGLGTGVGAMISPKVYLSMRGNSALSVGLLLLAAALLAMPYVSTVLILHLVYFMLGVLFDIITMGCQIMTRRVHGDKSGIWIGTNLAVLGGASALATLICYVDTSLFQQFAMTSATSLSAAVYLGIALPAPEKFEGFLEATPKFLSGSAAAVEELISRSSSMKGKCSLFFQKYSVEIHISGMLFSLSGGMATAGAYLYTYVEYTDIIPESQEPLLMVDFWVSSAVGIVAGLFDQRTCTLPSLYRHSTVAFLTAGAVGSAILVFRDSV-VVLWVFIGLFGLACGPMMGYTFELNNRISVPSATGMSIVTFGLSFGSVAVPYATSFVLDYTGSAAVFIVINVLSRLVPYPLMLNAKRITESR 1733
            VGTVF+A+G G   G+  S KVY    G S +  GL  LA  L  MP++++ L+LHL +  LGV   ++  GCQIMTR++HG ++G W+G N    G A A+  LI Y+  SLF Q+A+ +  S +  V + I  P P   +    A  K  +G                GK     Q Y +E+ +S M+F L GG  T+ AY   +VE TD+IP     LL+   W +  +G VAG+ D R   L  LY H  + FL  G +G  ++    S+ + LWV +GL+G   GP +GY ++LNNR +VPS  GMSIV  GL+ G+  VPY TS + +YTG+ ++  +I + S +VP PLM  AK I E++
Sbjct:  112 VGTVFVARGAGAMFGSASSAKVYKMYSGTSVMCSGLFFLAVVLTYMPFLTSTLVLHLCFGALGVCTAMLDTGCQIMTRKLHGREAGPWLGANTVAFGVAGAIVPLISYLTGSLFAQYAILAVFSAANGVLIYIT-PQPLPHQIPPPAVKKTTAG----------------GKPEK--QTYEIEMVLSVMVFWLVGGKVTSTAYFTEFVEETDLIPYDDATLLICVLWTAITLGRVAGIQDMRFLDLSKLYNHLLI-FLVGGIIGMGMIALFPSLPLALWVGVGLYGFFNGPTVGYIYDLNNRATVPSELGMSIVMLGLNCGASLVPYGTSLLWEYTGAYSLIYII-MFSHIVPIPLMYVAKYIFENK 457          
BLAST of mRNA_P-littoralis_Contig1238.2.1 vs. uniprot
Match: A0A7S2UZ78_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ78_9STRA)

HSP 1 Score: 208 bits (529), Expect = 8.370e-57
Identity = 131/370 (35.41%), Postives = 201/370 (54.32%), Query Frame = 3
Query:  636 VGTVFIAKGLGTGVGAMISPKVYLSMRGNSALSVGLLLLAAALLAMPYVSTVLILHLVYFMLGVLFDIITMGCQIMTRRVHGDKSGIWIGTNLAVLGGASALATLICYVDTSLFQQFAMTSATSLSAAVYLGIALPAPEKFEGFLEATPKFLSGSAAAVEELISRSSSMKGKCSLFFQKYSVEIHISGMLFSLSGGMATAGAYLYTYVEYTDIIPESQEPLLMVDFWVSSAVGIVAGLFDQRTCTLPSLYRHSTVAFLTAGAVGSAILV-FRDSVVVLWVFIGLFGLACGPMMGYTFELNNRISVPSATGMSIVTFGLSFGSVAVPYATSFVLDYTGSAAVFIVINVLSRLVPYPLMLNAKRITESRTRR 1742
            VG+VFIA+G G   G+ +S K+Y + +  + +++ LL  A  L  +P V TV  LH+ + +LG+   ++  GCQI TR++HG ++G W+G N    G + AL   + Y+  SL  Q+ + S  SL+    L +  P P K +    A  K  S   A                    Q Y +E  ++ M+F L GG  TA AY   +++ T I+P     LL++  WV+   G +AG+ DQR    P LY H  + F  AGA+   +L+ F  S +VLWV +GL+G   GP +GY ++LNNR++VPS  GMSIV  GL+ G+  VPY TS V +Y G   +   + ++S L+P PL+  A  + + +T++
Sbjct:  100 VGSVFIARGAGAMFGSAVSAKLYTAFKSQTIMALVLLTFAIVLTWLPLVKTVFSLHVSFTLLGICTAVLDTGCQIQTRKLHGVEAGPWLGANTVAFGISGALVPSLAYLTHSLMAQYVILSFVSLTVGALLYLP-PTPRKEQLPPPAVKKTASSGEAK-------------------QTYEIETCLAIMVFWLVGGKVTATAYFTEFIQDTRILPFEDCALLIMVLWVAITFGRIAGIQDQRFLNRPRLYNHLCL-FCLAGAIAMLLLLAFPSSRLVLWVGVGLYGFFNGPTVGYCYDLNNRLTVPSEVGMSIVMLGLNSGTSLVPYGTSLVWEYLGPFTLMWAL-LVSHLIPIPLLFLAAYLFDRKTKK 447          
BLAST of mRNA_P-littoralis_Contig1238.2.1 vs. uniprot
Match: D8LF81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF81_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 2.620e-56
Identity = 103/196 (52.55%), Postives = 139/196 (70.92%), Query Frame = 3
Query:  636 VGTVFIAKGLGTGVGAMISPKVYLSMRGNSALSVGLLLLAAALLAMPYVSTVLILHLVYFMLGVLFDIITMGCQIMTRRVHGDKSGIWIGTNLAVLGGASALATLICYVDTSLFQQFAMTSATSLSAAVYLGIALPAPEKFEGFLEATPKFLSGSAAAVEELISRSSSMKGKCSLFFQKYSVEIHISGMLFSLSGG 1223
            VGTVF+AKG GTGVGA++SPK+YLS+RGN+ LSVGL+LL+A LL  P++S V  LHL +F+ G++ D++  GCQIMTR+VHGDK  +W G N+  LG +SAL  ++ Y+D SLF Q+A+ S  S++ A+ LG+ +PAPE FEG +E TP+ L    AA        S+   KCSLF+ KYSVE +I  M+  L GG
Sbjct:   59 VGTVFVAKGAGTGVGALMSPKLYLSVRGNTVLSVGLVLLSAILLYFPFLSRVFTLHLAFFVQGLVVDVLMTGCQIMTRKVHGDKCNLWTGANVVSLGISSALFPVVAYLDDSLFDQYAILSGMSIAIAIILGVVIPAPESFEGLIEETPESLMMDTAAGGTARPEKSTWTRKCSLFYSKYSVEFNIGAMVLWLIGG 254          
BLAST of mRNA_P-littoralis_Contig1238.2.1 vs. uniprot
Match: A0A835ZG03_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG03_9STRA)

HSP 1 Score: 183 bits (465), Expect = 2.510e-48
Identity = 119/340 (35.00%), Postives = 174/340 (51.18%), Query Frame = 3
Query:  636 VGTVFIAKGLGTGVGAMISPKVYLSMRGNSALSVGLLLLAAALLAMPYVSTVLILHLVYFMLGVLFDIITMGCQIMTRRVHGDKSGIWIGTNLAVLGGASALATLICYVDT-SLFQQFAMTSATSLSAAVYLGIALPAPEKFEGFLEATPKFLSGSAAAVEELISRSSSMKGKCSLFFQKYSVEIHISGMLFSLSGGMATAGAYLYTYVEYTDIIPESQEPLLMVDFWVSSAVGIVAGLFDQRTCTLPSLYRHSTVAFLTAGAVGSAILVFRDSVVVLWVFIGLFGLACGPMMGYTFELNNRISVPSATGMSIVTFGLSFGSVAVPYATSFVLDYTGSAA 1652
            VG+VFIA+G+G  +GA+ S ++Y    GN+ ++  L  L  ALL +P+V+ V +LH+V+  LG+   I   GCQIMTRRVHG  +G W+G N    G + AL  L+ Y+ T SL  Q+A+           LG                                           F  +Y +E+ ++ M+F L GG   A AYL  YVE T +I  +   LL+V  W +  +G   G+  QR  T  +LY  +T+  +   A  +  L+F  S  VLW+ + L+GL  GP +GY ++LNNR + PS  GMS+V FGL+ G+  VPYA +    + G+AA
Sbjct:   96 VGSVFIARGVGAVLGAVGSAQLYRKFNGNAVITCALAALCGALLWLPFVTDVALLHVVFLCLGLSTAITDTGCQIMTRRVHGPSAGPWLGANTVAFGLSGALVPLVSYLPTHSLIAQYAL-----------LG-------------------------------------------FVHEYRIELLVAFMVFWLIGGKVGATAYLTQYVEDTGVIAPACASLLIVVLWAAITLGRCVGIHLQRDATPRALYAQTTLLCVAGAAAAALPLLFPSSAAVLWIAVALWGLFNGPSIGYCYDLNNRATAPSEVGMSVVMFGLNSGASLVPYALA--AAWRGAAA 379          
BLAST of mRNA_P-littoralis_Contig1238.2.1 vs. uniprot
Match: D8LF80_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF80_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 5.450e-48
Identity = 116/326 (35.58%), Postives = 179/326 (54.91%), Query Frame = 3
Query:  636 VGTVFIAKGLGTGVGAMISPKVYLSMRGNSALSVGLLLLAAALLAMPYVSTVLILHLVYFMLGVLFDIITMGCQIMTRRVHGDKSGIWIGTNLAVLGGASALATLICYVDTSLFQQFAMTSATSLSAAVYLGIALPAPEKFEGFLEATPKFLSGSAAAVEELISRSSSMK-----GKCSLFFQKYSVEIHISGMLFSLSGGMATAGAYLYTYVEYTDIIPESQEPLLMVDFWVSSAVGIVAGLFDQRTCTLPSLYRHSTVAFLTAGAVGSAILVFRDSVVVLWVFIGLFGLACGPMMGYTFELNNRISVPSATGMSIVTFGLSFGS 1598
            +G VF+ +GLG G+G ++SPK+Y   RG   +SV L LLAA LL +P  STV  LHL +F LG L  I+  GCQ+MTRR+HG  +G W+G N    G + A + LI ++  SL  ++A+ +  +     +L + LP+P+     +E  P          EE+I + + +K      K   F++   ++ H+  ++F   GG   A A+L  + + T     S+  LL+V  W++  +G V GL DQ T TL  LYRH+ V  L        +LV   S  +LWV +  FGL  GP++GY ++L+ R+S   AT  ++  FG++ G+
Sbjct:   88 IGAVFLTRGLGAGIGNIVSPKLYKWARGKITISVMLFLLAANLLLVPLASTVGSLHLNFFSLGFLTAIVDAGCQLMTRRLHGSAAGPWLGANTVSFGLSGAFSPLIGWLTGSLVVEYAVLATVAFLIGCFL-VVLPSPD-----VEPAPH---------EEVI-QVAPIKLPEGWSKPKAFYEANKIDFHLCSIMFWFMGGRIAATAFLRQFADNTS--DASRRTLLIVCLWLAITLGRVLGLRDQLTLTLARLYRHAAVLCLGGAGAMFVLLVSSRSTAMLWVTVLAFGLFNGPVLGYGYDLSTRVSPNPATSSTVAEFGITAGA 395          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1238.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5L7I1_9PHAE2.510e-11452.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ10_ECTSI1.270e-10449.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G4N2_ECTSI7.140e-7941.80Similar to sodium-dependent glucose transporter 1 ... [more]
A0A836CPE2_9STRA1.200e-6939.57Major facilitator superfamily domain-containing pr... [more]
H6WBB1_VAULI2.410e-6538.50Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
A0A7S3UWT4_HETAK2.970e-6338.96Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UZ78_9STRA8.370e-5735.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LF81_ECTSI2.620e-5652.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZG03_9STRA2.510e-4835.00Major facilitator superfamily domain-containing pr... [more]
D8LF80_ECTSI5.450e-4835.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1238contigP-littoralis_Contig1238:13028..17524 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1758
Hectar predicted targeting categorysignal anchor
Exons4
Cds size1074
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789539.8682141-CDS-P-littoralis_Contig1238:13027..135581680789539.8682141-CDS-P-littoralis_Contig1238:13027..13558Pylaiella littoralis U1_48CDSP-littoralis_Contig1238 13028..13558 -
1680789539.877457-CDS-P-littoralis_Contig1238:14041..141941680789539.877457-CDS-P-littoralis_Contig1238:14041..14194Pylaiella littoralis U1_48CDSP-littoralis_Contig1238 14042..14194 -
1680789539.8868973-CDS-P-littoralis_Contig1238:15228..156181680789539.8868973-CDS-P-littoralis_Contig1238:15228..15618Pylaiella littoralis U1_48CDSP-littoralis_Contig1238 15229..15618 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789539.8971074-UTR-P-littoralis_Contig1238:15618..156661680789539.8971074-UTR-P-littoralis_Contig1238:15618..15666Pylaiella littoralis U1_48UTRP-littoralis_Contig1238 15619..15666 -
1680789539.9103906-UTR-P-littoralis_Contig1238:16889..175241680789539.9103906-UTR-P-littoralis_Contig1238:16889..17524Pylaiella littoralis U1_48UTRP-littoralis_Contig1238 16890..17524 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1238.2.1prot_P-littoralis_Contig1238.2.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1238 13028..15618 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1238.2.1

>prot_P-littoralis_Contig1238.2.1 ID=prot_P-littoralis_Contig1238.2.1|Name=mRNA_P-littoralis_Contig1238.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=358bp
MISPKVYLSMRGNSALSVGLLLLAAALLAMPYVSTVLILHLVYFMLGVLF
DIITMGCQIMTRRVHGDKSGIWIGTNLAVLGGASALATLICYVDTSLFQQ
FAMTSATSLSAAVYLGIALPAPEKFEGFLEATPKFLSGSAAAVEELISRS
SSMKGKCSLFFQKYSVEIHISGMLFSLSGGMATAGAYLYTYVEYTDIIPE
SQEPLLMVDFWVSSAVGIVAGLFDQRTCTLPSLYRHSTVAFLTAGAVGSA
ILVFRDSVVVLWVFIGLFGLACGPMMGYTFELNNRISVPSATGMSIVTFG
LSFGSVAVPYATSFVLDYTGSAAVFIVINVLSRLVPYPLMLNAKRITESR
TRRGREGV
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mRNA from alignment at P-littoralis_Contig1238:13028..17524-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1238.2.1 ID=mRNA_P-littoralis_Contig1238.2.1|Name=mRNA_P-littoralis_Contig1238.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4497bp|location=Sequence derived from alignment at P-littoralis_Contig1238:13028..17524- (Pylaiella littoralis U1_48)
AGGTGTAAAATCAGGCAACGCCGCGCGCGAGCCGGGGACAAAAACTAAAA AAAAAGGATTGGAGGCCGCCGTGGAAAGGGCAATAATTTTGAGTTCTGCA AGGAGCACTCGACACCCGAAACGTCGTGAATAGGCTGAACAAGGGCCATA AGACCAGTAGGACAGGGTTGGGGGCCGAAACAACCGTCGAACGATGGCGG TCGGGGGGTGCTCGCGACTTGCTGTCGTGTGAAACCCCTCGCTTTTTTCG CCCTCTCTCAATCCAAGATCACAAACTCCAGCGAGCACGACAGGGCGCTC AAAACCGACCTTCCGGTCTGGAGACTCACGAAATCATGAACCCTGTACCA CCAGATTTGACATCAGTACTCTTATGATTTTGGATGCTTGCATCTGCTGC TCGAGCTGGAATGTTGGCCGTCGAAGATATGTTGTAGAGCAGTCCACAAC CCGGCCGCATCTCAGCCCATCCCTTGGTTTGGGTACCGGCGACCGTGGCG GCGAGTACAGCGGTGGAAGTTGGTTTCTTTCGGGCTGGGATGCACACGGT GGCCAGGCCTCATACAACACACGTTCGACATTCGAGGTTGCAACCCCACG AACATACCCCGAGGGTGGCGAAACAAAAGTAGACGGTGCGTGCGACTTTC AGTGGTTTCATACGTGAGATCACATCTCCTCACGCGGGAAGGCCGATTTT CATTTTTTTTGCAGTAAAAGTTACGATACAAGACACAAGTGTCGGTGCAC AAGGCAACACCAATCACCAGCCATGATACTCTCCCAACCACCCTCTACAG CAGTACGACCTCCTGGGGTTGTGGACGCGGCCCAAAGTCCCTTAATATAC CCTTTTGGGCTCCCGTGTTTGTTGAGTTCCTAAAAAAAACAGTTAGTCCA CTTTATCCAGCTGAGGAAACAACGCTGGTGATGGAGAACAAAGAATCAGG AGTTTCAAGTAGCTGCCCTGCAATCTCTGCCAGGTCAAACACAATTTTTT CCGGGAAGAACGCTTCTTCAACCTTTGTACCAAATGCACCCCGTTTCCGT ATGTACACAGCGGAACGCAGCGCAAGGGCTGAAAAATTTGGTAGATACTT AGTTTGTTTGCGAGGCCTCAATACCAAGTGAAAACCTGCCGTTTCTGAGC AAAGCTCTTTTGCGCTCTCAAAGGCAGAAGTGAGAATTTCCCGGGCTAAC CTTCTGTACCACGGGCAAGTTCCTTGCGTCGTGGGGTGCTTACCTTGCCA GATTCACGCCTACTTTAGGCACGTATACGACCTTCCCGCTTGCGCGGACG ACGGGTGAGGGGTGCGGGTGTCCCAAAATTTATATCAGAGCCACCTCGGG AGTTGAGAATACAAACACATGGAGCGGGTCCACAGCAATTTATCTCGTCA TGGATCGATGGACTTTTTTTCTGATGTTACACGGCACCGCAGAAGAGCCG GGGGTGGAAGGGCGGTTAACGGCAGGGCATCTACCAAACCCTTGGATAAA CCACCACTCATTTCTCGAAATTTCAGTGCCAGCCCCCCGCGGGTGGGGGG GGCGAAGCTTTCGTCCCACATTTCGTCGTTGCGTTTGCTCCCGTAAATGA CACATGCTACTTCGGTACTTCATCGTCACTTCGTCGTGCCCCCCATGTGG ACTTTGTTGGTCTCAGGAAGAAAGACGAAAAGTAATACCATGCCAGCGTG TGGAGATGAGGACCATACCAAAGTGGATACAACTCATTCCCGCCGTAGCG CTATTGAGACGGCTGCTCTACCTTCATATGTCCGACCGACAGACGGTTAT CATACCTGTTTTTTCTTGTGCGTCACTTATGAAACCTCAATCAACGCTCC CCGGCCAGGTGGGCACTGTCTTCATCGCCAAGGGCCTAGGGACTGGCGTC GGCGCCATGATCTCGCCTAAGGTTTACCTCAGCATGCGCGGGAACTCGGC CCTGTCCGTCGGGCTGCTGCTCCTGGCAGCCGCCCTCCTGGCCATGCCGT ACGTGTCCACAGTCTTGATCCTCCACCTCGTGTACTTCATGCTGGGGGTC CTCTTTGACATCATCACCATGGGATGTCAGATAATGACCCGAAGGGTCCA CGGCGATAAGTCGGGTATATGGATCGGGACCAACCTGGCTGTCCTAGGAG GGGCGAGCGCACTCGCGACGCTGATTTGCTACGTGGATACTTCGCTCTTC CAGCAGTTCGCCATGACCTCCGCCACGAGCTTGTCGGCTGCCGTTTACCT CGGCATTGCCTTGCCGGCCCCGGAAAAGTTCGAGGGATTCCTCGAGGTGA GTGGAGAAGCACGACGGCGAATAAAAAAAAGAAGAAGTTAGAGATCGATC GCTAGCGAGTGTGGGTGCGGGTAATCGGCGGCACATTTGTGGCTGTCGTC ACCAGAAAGGTAGACCCGCGTATGTATGTAACCCTGGCTGGACACCGCGA AAGAGAACGCGGAGTGCTCACAAGTCGATTAGGTCAATGATCGATGGGGG ACAGACAAACCAAAGGGCGCTGTGTGACCTGTTTCGGGAGCAAACAGTGG AGTAGCGCGGAAGCTGGTTTGCAAGGGGCTTGTCGGCTTGCGAGGTGTTC GCTTGTGGCGGAGAGTCCGCGTGATGGAGCAGTGGAGGCATGGCAGGCGT GCCATTGCATGTTTTGTCTGTGGGTAGCTGTACTAAGCGCACGACGGAAG TAGAAAAATAGTTTCCAGTTTGCCCCCTTTACCCCTGCGCACTTGTGCTG CCTGAAACTGTTACTGGGCTGGTGAAGAGAGTAGCACGCCCGATGTCCAT TTTGTCGACATCTTGGCAACTGAATCCGGTGTCTTTTTGTCTTTTTGTCA CTCCTCTGTGACTTTTTATTTTATTTTTGACTTTTATTTAGTTTTATTTC ATTTTGTGACTTGGCTCTGGACCAGGCTCCCTTTTCTTGTTTTCTTCTAT CTTGTTCTATTTTTGTACAGCGTTGTGTGATTTATCGGGGTCCGTTTTTG TTTTTGCCGGAGTCTGCTTGTCGTGCCTTTATTTGGTGGACTGAGGGGAT CTCCCGAGTACTATATACCTCTTCTAGGGCAAGCAGCCTGTGACCACGGA AATCGTACCTGATCGGTGGAGTACGGACATTAGAAGGTACTCAGGAGAGA TCGGAATGGTTTTTAATGTAGAGACAACAATAACAGCAACAACATTTGCA CGCCTTTATTCTTTGGCATCGCCGGTGCTTGCCGTGTGTCGAAAATACGT ACTTGCGGATTGGCTGCCATCCAACCACCTCATCAAATTTGTGTGCGTGT ATCTACGTTTCGCCCTTTCTCTGAGAGCAGGCAACGCCAAAATTTTTGTC GGGGTCAGCAGCGGCGGTAGAAGAACTGATCAGCAGGAGCTCGTCGATGA AGGGAAAGTGTTCGCTGTTTTTCCAAAAGTACAGCGTCGAAATCCACATC AGCGGCATGTTGTTCAGCCTTTCCGGTGGCATGGTGGGTGACTGCCTCAT CTACAGAACTGACTGTGCTCCCACTGCTGTTGCAGTAATGTACGCGTAGA CTGTGTTCTGCGTACGAGGTGCACGTGTGATCGACGAACAGCTTGGCGTA TTTGTCTTGAACGGCGGCGATATGAGCATCATCGACGTGACACGAATAGA CGGTGCAAACAGAGTTGTTGGACAAAAATTGTTGGGAATCGGCAATCAAC TTAAAGCCGCCGAACAAGGATTGAAGGCATTTTACCAGTGACCCCGCCCC GCGTGTAAAGTAAAACTCAATCGGCACCGACGGCGACTTGCTTACGGACG TGTACTTGACACGGCACGGCAAGCAGCTTTGAAACACGGCCTTTGACCAC GCGCTGAGTGGTCGCTGAAGGTCTGCCAGACCCGTCAGCCCCTCCACGAG GCTCAACTAACCTCTATCCCCCCAATCACCCCCCTGTCTTAATCCTATTT TTCGTTTCTTTTCTAGGCGACTGCAGGCGCGTATCTATACACGTACGTGG AATACACCGACATCATTCCGGAATCCCAAGAACCTCTTCTCATGGTAGAC TTTTGGGTGTCAAGTGCGGTCGGGATAGTGGCGGGCCTCTTCGACCAGCG GACTTGCACTCTTCCGAGCCTGTACCGGCACTCCACGGTCGCGTTCCTGA CGGCAGGGGCAGTGGGGTCGGCGATACTGGTATTTAGGGATTCAGTGGTT GTGCTTTGGGTCTTTATTGGTCTTTTCGGCCTCGCTTGCGGGCCGATGAT GGGGTACACCTTCGAACTCAACAACCGAATCAGTGTGCCCTCGGCGACGG GCATGTCGATCGTGACGTTCGGCTTGAGTTTCGGCTCGGTTGCTGTTCCG TACGCCACCTCGTTCGTGCTGGACTACACGGGCTCGGCGGCGGTATTTAT CGTGATCAACGTGCTGTCGAGGCTTGTGCCATACCCGCTCATGTTGAACG CCAAGAGAATAACCGAGTCGAGAACGCGCCGGGGGAGGGAGGGTGTT
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Coding sequence (CDS) from alignment at P-littoralis_Contig1238:13028..17524-

>mRNA_P-littoralis_Contig1238.2.1 ID=mRNA_P-littoralis_Contig1238.2.1|Name=mRNA_P-littoralis_Contig1238.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1074bp|location=Sequence derived from alignment at P-littoralis_Contig1238:13028..17524- (Pylaiella littoralis U1_48)
ATGATCTCGCCTAAGGTTTACCTCAGCATGCGCGGGAACTCGGCCCTGTC
CGTCGGGCTGCTGCTCCTGGCAGCCGCCCTCCTGGCCATGCCGTACGTGT
CCACAGTCTTGATCCTCCACCTCGTGTACTTCATGCTGGGGGTCCTCTTT
GACATCATCACCATGGGATGTCAGATAATGACCCGAAGGGTCCACGGCGA
TAAGTCGGGTATATGGATCGGGACCAACCTGGCTGTCCTAGGAGGGGCGA
GCGCACTCGCGACGCTGATTTGCTACGTGGATACTTCGCTCTTCCAGCAG
TTCGCCATGACCTCCGCCACGAGCTTGTCGGCTGCCGTTTACCTCGGCAT
TGCCTTGCCGGCCCCGGAAAAGTTCGAGGGATTCCTCGAGGCAACGCCAA
AATTTTTGTCGGGGTCAGCAGCGGCGGTAGAAGAACTGATCAGCAGGAGC
TCGTCGATGAAGGGAAAGTGTTCGCTGTTTTTCCAAAAGTACAGCGTCGA
AATCCACATCAGCGGCATGTTGTTCAGCCTTTCCGGTGGCATGGCGACTG
CAGGCGCGTATCTATACACGTACGTGGAATACACCGACATCATTCCGGAA
TCCCAAGAACCTCTTCTCATGGTAGACTTTTGGGTGTCAAGTGCGGTCGG
GATAGTGGCGGGCCTCTTCGACCAGCGGACTTGCACTCTTCCGAGCCTGT
ACCGGCACTCCACGGTCGCGTTCCTGACGGCAGGGGCAGTGGGGTCGGCG
ATACTGGTATTTAGGGATTCAGTGGTTGTGCTTTGGGTCTTTATTGGTCT
TTTCGGCCTCGCTTGCGGGCCGATGATGGGGTACACCTTCGAACTCAACA
ACCGAATCAGTGTGCCCTCGGCGACGGGCATGTCGATCGTGACGTTCGGC
TTGAGTTTCGGCTCGGTTGCTGTTCCGTACGCCACCTCGTTCGTGCTGGA
CTACACGGGCTCGGCGGCGGTATTTATCGTGATCAACGTGCTGTCGAGGC
TTGTGCCATACCCGCTCATGTTGAACGCCAAGAGAATAACCGAGTCGAGA
ACGCGCCGGGGGAGGGAGGGTGTT
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