mRNA_P-littoralis_Contig1233.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: D7FWV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV6_ECTSI) HSP 1 Score: 427 bits (1098), Expect = 2.710e-144 Identity = 202/239 (84.52%), Postives = 221/239 (92.47%), Query Frame = 1
Query: 10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
GPIVGAED SG+SYGREDW+CDINGAHTAALMNMETVPVFGHMDEVEEFD H IE+WT+YII+LDAL+EPDVFLNADVTPVFGRNY+RYL L + HRVTHFVRPSRTV CHIP LVRDLL HEL D LLEDADCAR+FKKG+FVRASGMLQQRYA+RIDAVMVTSCD+ SAVGGK+VPVLCE+DR KA+LRTGQG+ GIE+LRTGDAYLCFDA+RTWYRDGFWALGALILDETR+
Sbjct: 366 GPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELADSLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGEFGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRL 604
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI) HSP 1 Score: 434 bits (1116), Expect = 4.980e-141 Identity = 205/239 (85.77%), Postives = 224/239 (93.72%), Query Frame = 1
Query: 10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
GPIVGAED SG+SYGREDW+CDINGAHTAALMNMETVPVFGHMDEVEEFD H IE+WT+YII+LDAL+EPDVFLNADVTPVFGRNY+RYL L + HRVTHFVRPSRTV CHIP LVRDLL HELGDPLLEDADCAR+FKKG+FVRASGMLQQRYA+RIDAVMVTSCD+ SAVGGK+VPVLCE+DR KA+LRTGQG+LGIE+LRTGDAYLCFDA+RTWYRDGFWALGALILDETR+
Sbjct: 366 GPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRL 604
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 422 bits (1086), Expect = 1.660e-133 Identity = 203/231 (87.88%), Postives = 216/231 (93.51%), Query Frame = 1
Query: 10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGA 702
GPIVGAEDASG+ YGREDW+CDINGAHTAALMNMETVPVFGHMDEVEEFD H IE+WT+YII+LDAL EPDVFLNADVTPVFGRNY+RYL L + HRVTHFVRPSRTVS CHI KLVRDLLAHELGDPLLEDADCARRFKKG+FVRASGMLQQRYADRIDAVMVTS D+ SAVGGKIVPVLCE+DRVKA+LRTGQGDLGI+SL TGDAYLCFDA+RTWYRDGFWALGA
Sbjct: 552 GPIVGAEDASGSCYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALGEPDVFLNADVTPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSKCHISKLVRDLLAHELGDPLLEDADCARRFKKGIFVRASGMLQQRYADRIDAVMVTSTDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLHTGDAYLCFDAERTWYRDGFWALGA 782
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE) HSP 1 Score: 413 bits (1061), Expect = 1.230e-131 Identity = 197/239 (82.43%), Postives = 216/239 (90.38%), Query Frame = 1
Query: 10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
GPIVGAE+ SGTSYG EDW+CDINGAHTAALM+ME VPVFGH+DEVEE+D H IE+WT+YII+LDA +PDVF NADVTPVFGRNY+RYL L + HRVTHFVRPSR VS CHIPKLVRDLLAHE GDP L+DADCAR+FKKG+FVRASGMLQQRYADRIDAVMVT CD+ SAVGGKIVPVL E+DRVKA+LRTGQG LGIESLRTGDAYLC DA+RTWYRDGFWALGALILDETR+
Sbjct: 558 GPIVGAEEVSGTSYGPEDWQCDINGAHTAALMSMEVVPVFGHVDEVEEYDDHGIEDWTLYIIELDAFGKPDVFFNADVTPVFGRNYKRYLDLVDTAARHRVTHFVRPSRIVSMCHIPKLVRDLLAHEPGDPFLQDADCARKFKKGIFVRASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCLDAERTWYRDGFWALGALILDETRL 796
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5L909_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L909_9PHAE) HSP 1 Score: 397 bits (1021), Expect = 1.460e-129 Identity = 190/239 (79.50%), Postives = 209/239 (87.45%), Query Frame = 1
Query: 10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
GPI GAE+ SGT YG EDW+CDINGAHTA LM+ME VPVFGH+DEVEE+D H IE+WT+Y I+LDAL +PDVFLNADVTPVFGRNYERYL L + RVTHFVRPSR VS CHIP L +DLLAHELGDPLL+DADCAR+FKKG+FVRASGMLQQRYADRIDAVM T CD+ AVGGKIVPVL E+DRVKA+LRTGQ LGIESLRTGD YLC DA+RTWYRDGFWALGALILDETR+
Sbjct: 108 GPIAGAEEVSGTFYGPEDWQCDINGAHTAVLMSMEVVPVFGHVDEVEEYDDHDIEDWTLYKIELDALGKPDVFLNADVTPVFGRNYERYLDLVDTAARRRVTHFVRPSRIVSMCHIPTLAKDLLAHELGDPLLQDADCARKFKKGIFVRASGMLQQRYADRIDAVMATGCDEAFAVGGKIVPVLGEVDRVKAELRTGQEKLGIESLRTGDTYLCLDAERTWYRDGFWALGALILDETRL 346
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5JHT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT1_9PHAE) HSP 1 Score: 397 bits (1020), Expect = 3.420e-127 Identity = 191/237 (80.59%), Postives = 211/237 (89.03%), Query Frame = 1
Query: 10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDET 720
GPIVGAEDA G+SY REDWRCDINGAHTAALM+ME VPVFGHMDEVEEFD H IE+WT+++I+LD L+EPDVFLNADVTPV GRNY+RYL L + HRVTHFVR SRTV CHIP LVRDLLAHELGDPL+ED DCARRFKKG+F+RASGMLQQ YADRIDAVMVTS D+ SA+GGKI+PVLCE+ R A+LRTGQGDLGIESLRTGDAYLC DA+RTW RDGFWALGALILD+T
Sbjct: 391 GPIVGAEDARGSSYRREDWRCDINGAHTAALMSMEMVPVFGHMDEVEEFDSHNIEDWTLFVIKLDKLDEPDVFLNADVTPVSGRNYKRYLDLIDTAPRHRVTHFVRLSRTVDRCHIPTLVRDLLAHELGDPLIEDVDCARRFKKGIFMRASGMLQQGYADRIDAVMVTSNDEASALGGKIMPVLCEVIRASAELRTGQGDLGIESLRTGDAYLCVDAERTWNRDGFWALGALILDDT 627
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5LNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNU8_9PHAE) HSP 1 Score: 395 bits (1015), Expect = 5.100e-127 Identity = 199/279 (71.33%), Postives = 218/279 (78.14%), Query Frame = 1
Query: 10 GPIVGAEDASGTSYGREDWRCDIN----------------------------------------GAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
GPIVGAEDASG+SYGREDW+CDI AALMNMETVPVFGHMDEVEEFD H IE+WT+YI++LDAL EPDVF NADVTPVFGRNY+RYL L + +RVTHFVRPSRTVS CHIPKLV+DLLAHELGDPLLEDADCARRFK G+FVRASG+LQQRYADRIDAVMVTS D+ SAVGGKIVPVLCE+DRVKA+LRTGQGDLGI+SLRTG+AYLCFDA+RTWYRDGFWALG L LDETR+
Sbjct: 504 GPIVGAEDASGSSYGREDWQCDIXTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIVKLDALGEPDVFHNADVTPVFGRNYKRYLDLIDNAPRYRVTHFVRPSRTVSRCHIPKLVKDLLAHELGDPLLEDADCARRFKNGIFVRASGLLQQRYADRIDAVMVTSSDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLRTGNAYLCFDAERTWYRDGFWALGTLTLDETRL 782
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5KWL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL4_9PHAE) HSP 1 Score: 352 bits (902), Expect = 4.120e-113 Identity = 169/197 (85.79%), Postives = 182/197 (92.39%), Query Frame = 1
Query: 136 MDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
MDEVEEFD H IE+WT+YII+LDAL EPDVF NADVTPVFGRNY+RYL L + HRVTHFVRPSRTVS CHIPKLVRDLLAHELGDPLLEDADCARRFKKG+FVR SGMLQQRYADRIDAVMVTS D+ SAVGGKIVPVLCE+DRVKA+LRTGQGDLGI+SL TGDAYLCFDA+RTWYRDGFWALGA+ILDETR+
Sbjct: 1 MDEVEEFDGHNIEDWTLYIIKLDALGEPDVFRNADVTPVFGRNYQRYLDLIDNAPRHRVTHFVRPSRTVSRCHIPKLVRDLLAHELGDPLLEDADCARRFKKGIFVRTSGMLQQRYADRIDAVMVTSSDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLHTGDAYLCFDAERTWYRDGFWALGAIILDETRL 197
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI) HSP 1 Score: 353 bits (906), Expect = 1.970e-109 Identity = 165/241 (68.46%), Postives = 203/241 (84.23%), Query Frame = 1
Query: 10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTG--QGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
GPIVGAEDASGT+YG DW+CDINGAHTAA+++ME +P F HMDEV+ FD H IE+WT+Y+++L+A+ +PDVFLNADVTPVFGRNY+RYL L HRV+HFVRP+RT+ CHIP+LV+DLLA +LG+PLL+D D ARRFKKG+FVR SG+LQQR+ADRI+AVMVT+ + AVGGKIVPVL E++R+K++LR G LGIE L +GDAYLCF+A R WYRDGFWALG LILDETR+
Sbjct: 568 GPIVGAEDASGTTYGPGDWQCDINGAHTAAMLSMENLPAFTHMDEVQVFDGHDIEDWTLYVVRLEAVGDPDVFLNADVTPVFGRNYKRYLALIKTPAPHRVSHFVRPARTIQKCHIPRLVQDLLARDLGEPLLQDPDAARRFKKGLFVRTSGLLQQRHADRINAVMVTTSKEAMAVGGKIVPVLGEVNRIKSELRKNGTDGGLGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRL 808
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5JTS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS3_9PHAE) HSP 1 Score: 352 bits (903), Expect = 7.710e-109 Identity = 170/221 (76.92%), Postives = 189/221 (85.52%), Query Frame = 1
Query: 10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTW 672
GPIVGAE+ SGTSYG EDW+CDINGAHTAALM+M VPVFGH+DEVEE+ H IE+WT+Y I+LDAL +PD LNADVTPVFGRNY+RYL L + HRVTHFVRPSR VS CHIP L +DLLAHELGD LL+DADCAR+FKKG FVRASGMLQQRYADRIDAVMVT CD+ AVGGKIVPVL E+DRVK +LRTGQ LGIESLRTGD YLC DA++TW
Sbjct: 468 GPIVGAEEVSGTSYGPEDWQCDINGAHTAALMSMAVVPVFGHVDEVEEYHDHDIEDWTLYKIELDALGKPDELLNADVTPVFGRNYKRYLDLVDTAARHRVTHFVRPSRIVSMCHIPTLAKDLLAHELGDRLLQDADCARKFKKGTFVRASGMLQQRYADRIDAVMVTGCDEAFAVGGKIVPVLGEVDRVKDELRTGQEKLGIESLRTGDTYLCLDAEQTW 688 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1233.7.1 >prot_P-littoralis_Contig1233.7.1 ID=prot_P-littoralis_Contig1233.7.1|Name=mRNA_P-littoralis_Contig1233.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=242bp MLAGPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEback to top mRNA from alignment at P-littoralis_Contig1233:28452..29177- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1233.7.1 ID=mRNA_P-littoralis_Contig1233.7.1|Name=mRNA_P-littoralis_Contig1233.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=726bp|location=Sequence derived from alignment at P-littoralis_Contig1233:28452..29177- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1233:28452..29177- >mRNA_P-littoralis_Contig1233.7.1 ID=mRNA_P-littoralis_Contig1233.7.1|Name=mRNA_P-littoralis_Contig1233.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=726bp|location=Sequence derived from alignment at P-littoralis_Contig1233:28452..29177- (Pylaiella littoralis U1_48)back to top |