mRNA_P-littoralis_Contig1233.7.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1233.7.1
Unique NamemRNA_P-littoralis_Contig1233.7.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: D7FWV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV6_ECTSI)

HSP 1 Score: 427 bits (1098), Expect = 2.710e-144
Identity = 202/239 (84.52%), Postives = 221/239 (92.47%), Query Frame = 1
Query:   10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
            GPIVGAED SG+SYGREDW+CDINGAHTAALMNMETVPVFGHMDEVEEFD H IE+WT+YII+LDAL+EPDVFLNADVTPVFGRNY+RYL L   +  HRVTHFVRPSRTV  CHIP LVRDLL HEL D LLEDADCAR+FKKG+FVRASGMLQQRYA+RIDAVMVTSCD+ SAVGGK+VPVLCE+DR KA+LRTGQG+ GIE+LRTGDAYLCFDA+RTWYRDGFWALGALILDETR+
Sbjct:  366 GPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELADSLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGEFGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRL 604          
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI)

HSP 1 Score: 434 bits (1116), Expect = 4.980e-141
Identity = 205/239 (85.77%), Postives = 224/239 (93.72%), Query Frame = 1
Query:   10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
            GPIVGAED SG+SYGREDW+CDINGAHTAALMNMETVPVFGHMDEVEEFD H IE+WT+YII+LDAL+EPDVFLNADVTPVFGRNY+RYL L   +  HRVTHFVRPSRTV  CHIP LVRDLL HELGDPLLEDADCAR+FKKG+FVRASGMLQQRYA+RIDAVMVTSCD+ SAVGGK+VPVLCE+DR KA+LRTGQG+LGIE+LRTGDAYLCFDA+RTWYRDGFWALGALILDETR+
Sbjct:  366 GPIVGAEDVSGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHDIEDWTLYIIELDALDEPDVFLNADVTPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGIFVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRL 604          
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE)

HSP 1 Score: 422 bits (1086), Expect = 1.660e-133
Identity = 203/231 (87.88%), Postives = 216/231 (93.51%), Query Frame = 1
Query:   10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGA 702
            GPIVGAEDASG+ YGREDW+CDINGAHTAALMNMETVPVFGHMDEVEEFD H IE+WT+YII+LDAL EPDVFLNADVTPVFGRNY+RYL L   +  HRVTHFVRPSRTVS CHI KLVRDLLAHELGDPLLEDADCARRFKKG+FVRASGMLQQRYADRIDAVMVTS D+ SAVGGKIVPVLCE+DRVKA+LRTGQGDLGI+SL TGDAYLCFDA+RTWYRDGFWALGA
Sbjct:  552 GPIVGAEDASGSCYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALGEPDVFLNADVTPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSKCHISKLVRDLLAHELGDPLLEDADCARRFKKGIFVRASGMLQQRYADRIDAVMVTSTDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLHTGDAYLCFDAERTWYRDGFWALGA 782          
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE)

HSP 1 Score: 413 bits (1061), Expect = 1.230e-131
Identity = 197/239 (82.43%), Postives = 216/239 (90.38%), Query Frame = 1
Query:   10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
            GPIVGAE+ SGTSYG EDW+CDINGAHTAALM+ME VPVFGH+DEVEE+D H IE+WT+YII+LDA  +PDVF NADVTPVFGRNY+RYL L   +  HRVTHFVRPSR VS CHIPKLVRDLLAHE GDP L+DADCAR+FKKG+FVRASGMLQQRYADRIDAVMVT CD+ SAVGGKIVPVL E+DRVKA+LRTGQG LGIESLRTGDAYLC DA+RTWYRDGFWALGALILDETR+
Sbjct:  558 GPIVGAEEVSGTSYGPEDWQCDINGAHTAALMSMEVVPVFGHVDEVEEYDDHGIEDWTLYIIELDAFGKPDVFFNADVTPVFGRNYKRYLDLVDTAARHRVTHFVRPSRIVSMCHIPKLVRDLLAHEPGDPFLQDADCARKFKKGIFVRASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCLDAERTWYRDGFWALGALILDETRL 796          
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5L909_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L909_9PHAE)

HSP 1 Score: 397 bits (1021), Expect = 1.460e-129
Identity = 190/239 (79.50%), Postives = 209/239 (87.45%), Query Frame = 1
Query:   10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
            GPI GAE+ SGT YG EDW+CDINGAHTA LM+ME VPVFGH+DEVEE+D H IE+WT+Y I+LDAL +PDVFLNADVTPVFGRNYERYL L   +   RVTHFVRPSR VS CHIP L +DLLAHELGDPLL+DADCAR+FKKG+FVRASGMLQQRYADRIDAVM T CD+  AVGGKIVPVL E+DRVKA+LRTGQ  LGIESLRTGD YLC DA+RTWYRDGFWALGALILDETR+
Sbjct:  108 GPIAGAEEVSGTFYGPEDWQCDINGAHTAVLMSMEVVPVFGHVDEVEEYDDHDIEDWTLYKIELDALGKPDVFLNADVTPVFGRNYERYLDLVDTAARRRVTHFVRPSRIVSMCHIPTLAKDLLAHELGDPLLQDADCARKFKKGIFVRASGMLQQRYADRIDAVMATGCDEAFAVGGKIVPVLGEVDRVKAELRTGQEKLGIESLRTGDTYLCLDAERTWYRDGFWALGALILDETRL 346          
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5JHT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT1_9PHAE)

HSP 1 Score: 397 bits (1020), Expect = 3.420e-127
Identity = 191/237 (80.59%), Postives = 211/237 (89.03%), Query Frame = 1
Query:   10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDET 720
            GPIVGAEDA G+SY REDWRCDINGAHTAALM+ME VPVFGHMDEVEEFD H IE+WT+++I+LD L+EPDVFLNADVTPV GRNY+RYL L   +  HRVTHFVR SRTV  CHIP LVRDLLAHELGDPL+ED DCARRFKKG+F+RASGMLQQ YADRIDAVMVTS D+ SA+GGKI+PVLCE+ R  A+LRTGQGDLGIESLRTGDAYLC DA+RTW RDGFWALGALILD+T
Sbjct:  391 GPIVGAEDARGSSYRREDWRCDINGAHTAALMSMEMVPVFGHMDEVEEFDSHNIEDWTLFVIKLDKLDEPDVFLNADVTPVSGRNYKRYLDLIDTAPRHRVTHFVRLSRTVDRCHIPTLVRDLLAHELGDPLIEDVDCARRFKKGIFMRASGMLQQGYADRIDAVMVTSNDEASALGGKIMPVLCEVIRASAELRTGQGDLGIESLRTGDAYLCVDAERTWNRDGFWALGALILDDT 627          
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5LNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNU8_9PHAE)

HSP 1 Score: 395 bits (1015), Expect = 5.100e-127
Identity = 199/279 (71.33%), Postives = 218/279 (78.14%), Query Frame = 1
Query:   10 GPIVGAEDASGTSYGREDWRCDIN----------------------------------------GAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
            GPIVGAEDASG+SYGREDW+CDI                                             AALMNMETVPVFGHMDEVEEFD H IE+WT+YI++LDAL EPDVF NADVTPVFGRNY+RYL L   +  +RVTHFVRPSRTVS CHIPKLV+DLLAHELGDPLLEDADCARRFK G+FVRASG+LQQRYADRIDAVMVTS D+ SAVGGKIVPVLCE+DRVKA+LRTGQGDLGI+SLRTG+AYLCFDA+RTWYRDGFWALG L LDETR+
Sbjct:  504 GPIVGAEDASGSSYGREDWQCDIXTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIVKLDALGEPDVFHNADVTPVFGRNYKRYLDLIDNAPRYRVTHFVRPSRTVSRCHIPKLVKDLLAHELGDPLLEDADCARRFKNGIFVRASGLLQQRYADRIDAVMVTSSDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLRTGNAYLCFDAERTWYRDGFWALGTLTLDETRL 782          
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5KWL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL4_9PHAE)

HSP 1 Score: 352 bits (902), Expect = 4.120e-113
Identity = 169/197 (85.79%), Postives = 182/197 (92.39%), Query Frame = 1
Query:  136 MDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
            MDEVEEFD H IE+WT+YII+LDAL EPDVF NADVTPVFGRNY+RYL L   +  HRVTHFVRPSRTVS CHIPKLVRDLLAHELGDPLLEDADCARRFKKG+FVR SGMLQQRYADRIDAVMVTS D+ SAVGGKIVPVLCE+DRVKA+LRTGQGDLGI+SL TGDAYLCFDA+RTWYRDGFWALGA+ILDETR+
Sbjct:    1 MDEVEEFDGHNIEDWTLYIIKLDALGEPDVFRNADVTPVFGRNYQRYLDLIDNAPRHRVTHFVRPSRTVSRCHIPKLVRDLLAHELGDPLLEDADCARRFKKGIFVRTSGMLQQRYADRIDAVMVTSSDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLHTGDAYLCFDAERTWYRDGFWALGAIILDETRL 197          
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 1.970e-109
Identity = 165/241 (68.46%), Postives = 203/241 (84.23%), Query Frame = 1
Query:   10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTG--QGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI 726
            GPIVGAEDASGT+YG  DW+CDINGAHTAA+++ME +P F HMDEV+ FD H IE+WT+Y+++L+A+ +PDVFLNADVTPVFGRNY+RYL L      HRV+HFVRP+RT+  CHIP+LV+DLLA +LG+PLL+D D ARRFKKG+FVR SG+LQQR+ADRI+AVMVT+  +  AVGGKIVPVL E++R+K++LR     G LGIE L +GDAYLCF+A R WYRDGFWALG LILDETR+
Sbjct:  568 GPIVGAEDASGTTYGPGDWQCDINGAHTAAMLSMENLPAFTHMDEVQVFDGHDIEDWTLYVVRLEAVGDPDVFLNADVTPVFGRNYKRYLALIKTPAPHRVSHFVRPARTIQKCHIPRLVQDLLARDLGEPLLQDPDAARRFKKGLFVRTSGLLQQRHADRINAVMVTTSKEAMAVGGKIVPVLGEVNRIKSELRKNGTDGGLGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRL 808          
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Match: A0A6H5JTS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS3_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 7.710e-109
Identity = 170/221 (76.92%), Postives = 189/221 (85.52%), Query Frame = 1
Query:   10 GPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVEEFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSIGHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMFVRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTGQGDLGIESLRTGDAYLCFDAQRTW 672
            GPIVGAE+ SGTSYG EDW+CDINGAHTAALM+M  VPVFGH+DEVEE+  H IE+WT+Y I+LDAL +PD  LNADVTPVFGRNY+RYL L   +  HRVTHFVRPSR VS CHIP L +DLLAHELGD LL+DADCAR+FKKG FVRASGMLQQRYADRIDAVMVT CD+  AVGGKIVPVL E+DRVK +LRTGQ  LGIESLRTGD YLC DA++TW
Sbjct:  468 GPIVGAEEVSGTSYGPEDWQCDINGAHTAALMSMAVVPVFGHVDEVEEYHDHDIEDWTLYKIELDALGKPDELLNADVTPVFGRNYKRYLDLVDTAARHRVTHFVRPSRIVSMCHIPTLAKDLLAHELGDRLLQDADCARKFKKGTFVRASGMLQQRYADRIDAVMVTGCDEAFAVGGKIVPVLGEVDRVKDELRTGQEKLGIESLRTGDTYLCLDAEQTW 688          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1233.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWV6_ECTSI2.710e-14484.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FV89_ECTSI4.980e-14185.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCS9_9PHAE1.660e-13387.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSM3_9PHAE1.230e-13182.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L909_9PHAE1.460e-12979.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHT1_9PHAE3.420e-12780.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LNU8_9PHAE5.100e-12771.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWL4_9PHAE4.120e-11385.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFQ2_ECTSI1.970e-10968.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JTS3_9PHAE7.710e-10976.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1233contigP-littoralis_Contig1233:28452..29177 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FV89
Model size727
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.17e-142
EggNOG OGs2E3IK@1|root,2SAKM@2759|Eukaryota
Cds size726
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789538.7310886-CDS-P-littoralis_Contig1233:28451..291771680789538.7310886-CDS-P-littoralis_Contig1233:28451..29177Pylaiella littoralis U1_48CDSP-littoralis_Contig1233 28452..29177 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1233.7.1prot_P-littoralis_Contig1233.7.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1233 28452..29177 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1233.7.1

>prot_P-littoralis_Contig1233.7.1 ID=prot_P-littoralis_Contig1233.7.1|Name=mRNA_P-littoralis_Contig1233.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=242bp
MLAGPIVGAEDASGTSYGREDWRCDINGAHTAALMNMETVPVFGHMDEVE
EFDHHKIENWTIYIIQLDALEEPDVFLNADVTPVFGRNYERYLRLSPRSI
GHRVTHFVRPSRTVSTCHIPKLVRDLLAHELGDPLLEDADCARRFKKGMF
VRASGMLQQRYADRIDAVMVTSCDKTSAVGGKIVPVLCEIDRVKAKLRTG
QGDLGIESLRTGDAYLCFDAQRTWYRDGFWALGALILDETRI
back to top

mRNA from alignment at P-littoralis_Contig1233:28452..29177-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1233.7.1 ID=mRNA_P-littoralis_Contig1233.7.1|Name=mRNA_P-littoralis_Contig1233.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=726bp|location=Sequence derived from alignment at P-littoralis_Contig1233:28452..29177- (Pylaiella littoralis U1_48)
ATGCTGGCGGGGCCGATCGTCGGAGCAGAGGACGCGTCCGGGACATCCTA CGGGAGGGAAGACTGGCGATGTGACATCAACGGGGCACACACGGCGGCTC TAATGAACATGGAGACGGTGCCTGTTTTCGGACACATGGACGAAGTGGAG GAGTTCGATCACCACAAAATTGAGAATTGGACGATATACATAATACAACT GGACGCGCTCGAAGAACCAGACGTATTCCTTAACGCGGACGTGACGCCAG TCTTCGGTCGAAACTACGAGCGGTACCTTCGTCTGTCCCCCAGATCCATT GGGCATCGAGTGACCCACTTCGTGCGACCATCCAGAACGGTCAGCACGTG CCACATACCCAAACTTGTGAGAGACCTGCTCGCGCATGAGCTGGGTGATC CCCTCCTCGAGGATGCCGACTGTGCGCGCCGGTTCAAAAAAGGAATGTTC GTGCGGGCCAGCGGCATGTTACAGCAGAGGTACGCGGACAGGATAGATGC CGTCATGGTTACGAGCTGTGACAAGACCTCCGCTGTGGGTGGAAAAATCG TCCCTGTCCTGTGCGAGATCGATCGCGTCAAGGCCAAGCTTCGGACGGGA CAAGGAGACCTTGGAATCGAGTCACTTCGCACCGGTGACGCGTACCTTTG TTTCGACGCACAACGGACTTGGTATAGAGATGGCTTCTGGGCGTTAGGTG CGCTCATCCTCGACGAAACTCGAATA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig1233:28452..29177-

>mRNA_P-littoralis_Contig1233.7.1 ID=mRNA_P-littoralis_Contig1233.7.1|Name=mRNA_P-littoralis_Contig1233.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=726bp|location=Sequence derived from alignment at P-littoralis_Contig1233:28452..29177- (Pylaiella littoralis U1_48)
ATGCTGGCGGGGCCGATCGTCGGAGCAGAGGACGCGTCCGGGACATCCTA
CGGGAGGGAAGACTGGCGATGTGACATCAACGGGGCACACACGGCGGCTC
TAATGAACATGGAGACGGTGCCTGTTTTCGGACACATGGACGAAGTGGAG
GAGTTCGATCACCACAAAATTGAGAATTGGACGATATACATAATACAACT
GGACGCGCTCGAAGAACCAGACGTATTCCTTAACGCGGACGTGACGCCAG
TCTTCGGTCGAAACTACGAGCGGTACCTTCGTCTGTCCCCCAGATCCATT
GGGCATCGAGTGACCCACTTCGTGCGACCATCCAGAACGGTCAGCACGTG
CCACATACCCAAACTTGTGAGAGACCTGCTCGCGCATGAGCTGGGTGATC
CCCTCCTCGAGGATGCCGACTGTGCGCGCCGGTTCAAAAAAGGAATGTTC
GTGCGGGCCAGCGGCATGTTACAGCAGAGGTACGCGGACAGGATAGATGC
CGTCATGGTTACGAGCTGTGACAAGACCTCCGCTGTGGGTGGAAAAATCG
TCCCTGTCCTGTGCGAGATCGATCGCGTCAAGGCCAAGCTTCGGACGGGA
CAAGGAGACCTTGGAATCGAGTCACTTCGCACCGGTGACGCGTACCTTTG
TTTCGACGCACAACGGACTTGGTATAGAGATGGCTTCTGGGCGTTAGGTG
CGCTCATCCTCGACGAAACTCGAATA
back to top