mRNA_P-littoralis_Contig1231.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1231.5.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 333 bits (855), Expect = 5.320e-110 Identity = 165/175 (94.29%), Postives = 169/175 (96.57%), Query Frame = 1
Query: 61 MSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTD-VTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQ 582
MSRKMDKKQR++ADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMA TTFNKVLDALYDRVKQA++DDLR LREE LGMGYGGAFLGA LDLTTVANEEYITFTVSYVKKG TD VTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQ
Sbjct: 1 MSRKMDKKQRDLADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMASTTFNKVLDALYDRVKQAIMDDLRLLREEFLGMGYGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQ 175
BLAST of mRNA_P-littoralis_Contig1231.5.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 301 bits (771), Expect = 3.460e-96 Identity = 145/178 (81.46%), Postives = 162/178 (91.01%), Query Frame = 1
Query: 49 LLEYMSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQ 582
+L++++ KM +KQRE DLRYVIWCCIN RP QMRYDDGFKLFVG LSPQYVDTTMA TTFNK+LD L+DRV+QAV+DDLRS+REECLGMGYGGAFLGAQLDLTTVA EEYITF VSYVKKG+TDV+RV+LATRAFPGSHTA+DIKPWIEALTLEYF DL+G SV+ DVFL FTVDQ
Sbjct: 1 MLKFVAPKMLQKQREFVDLRYVIWCCINPRPMQMRYDDGFKLFVGALSPQYVDTTMASTTFNKLLDTLHDRVEQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMGGSVESQDVFLAFTVDQ 178
BLAST of mRNA_P-littoralis_Contig1231.5.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 301 bits (770), Expect = 4.430e-96 Identity = 144/178 (80.90%), Postives = 163/178 (91.57%), Query Frame = 1
Query: 49 LLEYMSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQ 582
+L++++ K+ +KQRE ADLRY+IWCCINLRP QMRYDDGFKLFVG LSPQYVDTTMA TTFNK+LD L+DR+KQAV+DDLRS+REECLGMGYGGAFLGAQLDLTTVA EEYITF VSYVKKG+TDV+RV+LATRAFPGSHTA+DIKPWIEALTLEY DL+G SV+ DVFL FTVDQ
Sbjct: 1 MLKFVAPKVLQKQREFADLRYMIWCCINLRPMQMRYDDGFKLFVGALSPQYVDTTMAATTFNKLLDTLHDRMKQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMGGSVESQDVFLAFTVDQ 178
BLAST of mRNA_P-littoralis_Contig1231.5.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 286 bits (732), Expect = 1.090e-88 Identity = 139/189 (73.54%), Postives = 161/189 (85.19%), Query Frame = 1
Query: 16 PEASGGTPQSSLLEYMSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQ 582
P AS + SSL+ YM K+DKK+RE+ADLR+VIWCCINLRPQQMR+DDGFKLF+G LSP YV++TM+ TF+K LD LY RVK +++DDLR+LREECLGMGY GAFLGAQLDLTTVA EEYITFTVSYV+KG+TDVTRVALA RAFPG+HTA+DI PWIE LT EYF D +G V+P DVFL FTVDQ
Sbjct: 180 PSASASSS-SSLVNYMVPKLDKKRREMADLRFVIWCCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGEDVEPKDVFLAFTVDQ 367
BLAST of mRNA_P-littoralis_Contig1231.5.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 258 bits (659), Expect = 5.820e-78 Identity = 123/180 (68.33%), Postives = 148/180 (82.22%), Query Frame = 1
Query: 43 SSLLEYMSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQ 582
SSL+ YM M K +++ AD R+V+WCCI+LRP+Q+R+D GFKLF+G LSP+YV TTMA +TFN+ LD LY V +V+ +LR+LREE LGMGY G FLGAQLDLTT A EEYITFTV++VKKG+TD+TR+ALA RAFPGSHTAEDI+PWIE LTLEYF +G SVQP DVFL FTVDQ
Sbjct: 190 SSLMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQ 369
BLAST of mRNA_P-littoralis_Contig1231.5.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 250 bits (639), Expect = 1.560e-76 Identity = 118/170 (69.41%), Postives = 142/170 (83.53%), Query Frame = 1
Query: 73 MDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQ 582
M K +++ AD R+V+WCCI+LRP+Q+R+D GFKLF+G LSP+YV TTMA +TFN+ LD LY V +V+ +LR+LREE LGMGY G FLGAQLDLTT A EEYITFTV++VKKG+TD+TR+ALA RAFPGSHTAEDI+PWIE LTLEYF +G SVQP DVFL FTVDQ
Sbjct: 5 MTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQ 174
BLAST of mRNA_P-littoralis_Contig1231.5.1 vs. uniprot
Match: A0A6H5KFJ9_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ9_9PHAE) HSP 1 Score: 243 bits (619), Expect = 2.060e-71 Identity = 122/172 (70.93%), Postives = 143/172 (83.14%), Query Frame = 1
Query: 61 MSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTV 576
M KMDKK+RE+ADLR+VIW CINLRPQQMR+DDGFKLF+G LSP YV++TM+ TF+K LD LY +V +V+DDLR+LREECLGMGY GAFLGAQLDLTTVA EEYITFTVSYVKKG+TDVTRVALA RAFPG+HTA+DI+PWIE L F + +VQ D+F G T+
Sbjct: 310 MVPKMDKKRREMADLRFVIWRCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYGKVNTSVVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVKKGSTDVTRVALACRAFPGTHTADDIRPWIEELRC-LFLHCVQCAVQDDDIF-GATI 479
BLAST of mRNA_P-littoralis_Contig1231.5.1 vs. uniprot
Match: A0A6H5KVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP4_9PHAE) HSP 1 Score: 218 bits (556), Expect = 2.580e-62 Identity = 103/152 (67.76%), Postives = 127/152 (83.55%), Query Frame = 1
Query: 43 SSLLEYMSRKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIE 498
SSL+ YM M K +++ AD R+V+WCCI+LRP+Q+R+D GFKLF+G LSP+YV TTMA +TFN+ LD LY V +V+ +LR+LREE LGMGY G FLGAQLDLTT A EEYITFTV++VKKG+TD+TR+ALA RAFPGSHTAEDI+PWIE
Sbjct: 1274 SSLMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIE 1425
BLAST of mRNA_P-littoralis_Contig1231.5.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 213 bits (541), Expect = 4.390e-61 Identity = 109/203 (53.69%), Postives = 138/203 (67.98%), Query Frame = 1
Query: 4 GRESPEASGGTPQSSLLEYMS--RKMDKKQREVADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMAPTTFNKVLDALYDRVKQAVLDDLRSLREECLGMGYGGAFLGAQLDLTTVANEEYITFTVSYVKKGNTDVTRVALATRAFPGSHTAEDIKPWIEA--------LTLEYFKDLIGPSVQPHDVFLGFTVDQ 582
G+ +A TP S+ +YM + A+ R+V+WC IN+RPQ MRYDDG+KL +G+L P+YV++TM+ TFN +L +Y AV LR RE C+ +GY G FLGAQLDLTTVANEEYITF+VSY+ + T +TRV LATRAFPGSHTA DI+PWIE LT E+F D++G +VQP DVFL FTVDQ
Sbjct: 157 GKGKGKAGSSTP--SIKDYMQTGNPLLASTEAAANRRFVVWCAINMRPQNMRYDDGYKLHMGMLCPKYVESTMSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGENVQPKDVFLAFTVDQ 357 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1231.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1231.5.1 >prot_P-littoralis_Contig1231.5.1 ID=prot_P-littoralis_Contig1231.5.1|Name=mRNA_P-littoralis_Contig1231.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=194bp AGRESPEASGGTPQSSLLEYMSRKMDKKQREVADLRYVIWCCINLRPQQMback to top mRNA from alignment at P-littoralis_Contig1231:28992..29820- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1231.5.1 ID=mRNA_P-littoralis_Contig1231.5.1|Name=mRNA_P-littoralis_Contig1231.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=829bp|location=Sequence derived from alignment at P-littoralis_Contig1231:28992..29820- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1231:28992..29820- >mRNA_P-littoralis_Contig1231.5.1 ID=mRNA_P-littoralis_Contig1231.5.1|Name=mRNA_P-littoralis_Contig1231.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=582bp|location=Sequence derived from alignment at P-littoralis_Contig1231:28992..29820- (Pylaiella littoralis U1_48)back to top |