mRNA_P-littoralis_Contig123.119.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig123.119.1 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE) HSP 1 Score: 476 bits (1226), Expect = 8.690e-148 Identity = 383/1023 (37.44%), Postives = 499/1023 (48.78%), Query Frame = 3
Query: 186 PAGTTLTSVLLKAGSVQHAGKGESAVVEGRDESAVEEAGRKHVDTLKQRAEQRISRKAAAAAAASTR--------AKR--RLGADAALSRSSSLATAIVTGSKRTGRDSEAERSRVQTVISSVSGTNKLTAVSVFRWMPPVGCAARATALCHTTTLILACFPPSPRKTLLLQQAQEKHRADVVEMVEKDPVLKEQIREVLGRGDKGRVDA----VNAENTCALADSLASSELN---------YKTRATPAASRITPCWRRPLEQGSTRALLATRYATPPTGALPLYRREASRLPSGRGALA*EQTLSVRHTSGCTAPTTPSLRLRRWKRGATAGQQDQERRDGPTRVGLGVSVLALGRRLTCVGRLRETKHVS-------TFQEGRRGVPPRRQLMVTGDKAFSLFLKWPQYLTLREELL*ENGAFKDPGRTTFLSTRCGCLGGSGRVFCCVLCPYRGRGGVVAFFPLLYF*AKRWSFD*RFVCFHCSFPPSTFHAHC-YFLQW---SQRCSSARAKFTRSRVFISKPLVG*WPPYTTTVTARAAGAMGWFARSGRRCAKGCTSFRKRCVARRLTCCRGTRRVGLSTSVGSQRALPQNARAVGLTAPTASPLTARRSRSTRTSTWDGSASRT----KKWRTERCTRSSR-------YLNKGLSYMEHHELPKWQRNAHNMSMLTFAHGTLLVETDLIEKYRHEASSILTCATAPTTSMMVALVHHTPDGNGRHTTDAWTFLSADRNHDFDFHIYATDIVIKYYTEWEGRAATAGVPLPLLLIWTDGYGKQYKGKRNFHAVGQSLHRLGCLLVHNFAVTSHFKGAHDGIGGLLKTLMRDADKKGLRIHDTAAAHDFLSAYAKSKEEDEGGYLGAWSPYKVASFKMELIGAKEIPRPPIDLTGIPGSSKLYRFMGPEEQPPRL-GVCVGVQTAVEGSVEVANGERELVPNA-RFLAAEGWSAHPPLELAKRQYRCRVRQASCYCSKCRVGEYPECMVAKTYPELVGMVKYGTGYERAKMTSVSCG 3113
P G LTS LLK G+ A K +VV+ + V R+HVD L++RA +R A+R RLGADA L+RS L + +G +R+ + TTT PP R+T + + HR V + V +D VLKE++RE+L G+ G A V+AENT AL S+ + + + Y T AA C + GA+ L R S G + H + T P +L ++G +ER D + V+ L RR + S ++ PRRQLMV GD+ + FLKWP+YL L+ ELL E+ +F DPGRT FLSTRCGCL +V C + +G + F +L HA+C +W C A F S+ L V G F GR+ A CVA + C G+ +P N A+G S + R W A + K + ++ + + ++ Y+ HHEL KWQR AHNM + TF+ G LLVETD IEKY+HEA +ILTCATAP+T+MMVALVHH+PD NGRH TDAW F+S+D NHDFDFHIYA DI+++YY +GRAATAG P P + I+TDG KQYKGKRNFHAV +SLHRLG +L+HNFAVTSHFKGAHDGIGGLLK L+R+A+K+G RIHDT AA DFL AYA++KE D GG+ WSPY++ F ++L+G +EIPRP +DLTGI GSSKLY+FMG E Q GV V VQ G + GE E+V N R+ A E P ++Y+ RVRQASCYCSKC VG Y +C+ AK Y +VGMVK +G + K+T SCG
Sbjct: 23 PRGYHLTSTLLKKGTETAATKAIGSVVDNLE--GVVRMAREHVDDLQERATKRXXXXXXXXXXXXXXXXXXXXXXAERGPRLGADARLARSDPLEAHLFSGPRRSPQP--------------------------------------------TTT------PPRQRQTAI-----DGHRDGVKQSVLEDDVLKEELRELLRVGELGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGAQHTC-----DPDDPXXXXXXXXXXXXHGAVSLTARAQSL---GVRDATFRAARTRMHRTDHTIPPQEAL-----EKGRYLWAPRKERSDK-----MDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLV-EPKVSQCACQIHTQQGLYLKAFEMLM---------------------PAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSF-SEALA------CEKVDFLEEDRGGRFEHWGRKPA---------CVAMECSEC----------GFGNPGGIPMNCDALG-------------SMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKKYLHHHELAKWQRQAHNMCLATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGAILIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHDTEAAADFLKAYAEAKE-DGGGHFSTWSPYRIRRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESSGVSVEVQKE-SGVPPLVGGENEVVVNPLRWQADESIVLTVPA--VTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKYEGMVGMVKDVSG--KHKVTRTSCG 903
BLAST of mRNA_P-littoralis_Contig123.119.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 478 bits (1230), Expect = 1.320e-142 Identity = 391/1074 (36.41%), Postives = 513/1074 (47.77%), Query Frame = 3
Query: 42 HDFRGHPTQPLESYGLVDFAGWRPCRQWNAQSQFVE---QKES*NTRGISTPAGTTLTSVLLKAGSVQHAGKGESAVVEGRDESAVEEAGRKHVDTLKQRAEQRISRKAAAAAAASTR--------AKR--RLGADAALSRSSSLATAIVTGSKRTGRDSEAERSRVQTVISSVSGTNKLTAVSVFRWMPPVGCAARATALCHTTTLILACFPPSPRKTLLLQQAQEKHRADVVEMVEKDPVLKEQIREVLGRGDKGRVDA----VNAENTCALADSLASSELN---------YKTRATPAASRITPCWRRPLEQGSTRALLATRYATPPTGALPLYRREASRLPSGRGALA*EQTLSVRHTSGCTAPTTPSLRLRRWKRGATAGQQDQERRDGPTRVGLGVSVLALGRRLTCVGRLRETKHVS-------TFQEGRRGVPPRRQLMVTGDKAFSLFLKWPQYLTLREELL*ENGAFKDPGRTTFLSTRCGCLGGSGRVFCCVLCPYRGRGGVVAFFPLLYF*AKRWSFD*RFVCFHCSFPPSTFHAHC-YFLQW---SQRCSSARAKFTRSRVFISKPLVG*WPPYTTTVTARAAGAMGWFARSGRRCAKGCTSFRKRCVARRLTCCRGTRRVGLSTSVGSQRALPQNARAVGLTAPTASPLTARRSRSTRTSTWDGSASRT----KKWRTERCTRSSR-------YLNKGLSYMEHHELPKWQRNAHNMSMLTFAHGTLLVETDLIEKYRHEASSILTCATAPTTSMMVALVHHTPDGNGRHTTDAWTFLSADRNHDFDFHIYATDIVIKYYTEWEGRAATAGVPLPLLLIWTDGYGKQYKGKRNFHAVGQSLHRLGCLLVHNFAVTSHFKGAHDGIGGLLKTLMRDADKKGLRIHDTAAAHDFLSAYAKSKEEDEGGYLGAWSPYKVASFKMELIGAKEIPRPPIDLTGIPGSSKLYRFMGPEEQPPRL-GVCVGVQTAVEGSVEVANGERELVPNA-RFLAAEGWSAHPPLELAKRQYRCRVRQASCYCSKCRVGEYPECMVAKTYPELVGMVKYGTGYERAKMTSVSCG 3113
+ +G PT P L W + V+ + R + P G LTS LLK G+ A K +VV+ + V R+HVD L++RA +R A+R RLGADA L+RS L + +G +R+ + TTT PP R+T + + HR V + V +D VLKE++RE+L G+ G A V+AENT AL S+ + + + Y T AA C + GA+ L R S G + H + T P +L ++G +ER D + V+ L RR + S ++ PRRQLMV GD+ + FLKWP+YL L+ ELL E+ +F DPGRT FLSTRCGCL +V C + +G + F +L HA+C +W C A F S+ L V G F GR+ A CVA + C G+ +P N A+G S + R W A + K + ++ + + ++ Y+ HHEL KWQR AHNM + TF+ G LLVETD IEKY+HEA +ILTCATAP+T+MMVALVHH+PD NGRH TDAW F+S+D NHDFDFHIYA DI+++YY +GRAATAG P P + I+TDG KQYKGKRNFHAV +SLHRLG +L+HNFAVTSHFKGAHDGIGGLLK L+R+A+K+G RIHDT AA DFL AYA++KE D GG+ WSPY++ F ++L+G +EIPRP +DLTGI GSSKLY+FMG E Q GV V VQ G + GE E+V N R+ A E P ++Y+ RVRQASCYCSKC VG Y +C+ AK Y +VGMVK +G + K+T SCG
Sbjct: 596 NSLQGLPTPPRRDTALSLSVSWTVAAAATMLRRDVKIAGEARVIRHRWRTHPRGYHLTSTLLKKGTETAATKAIGSVVDNLE--GVARMAREHVDDLQERATKRXXXXXXXXXXXXXXXXXXXXXXAERGPRLGADARLARSDPLEAHLFSGPRRSPQP--------------------------------------------TTT------PPRQRQTAI-----DGHRDGVKQSVLEDDVLKEELRELLRVGELGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGAQHTC-----DPDDPXXXXXXXXXXXXHGAVSLTARAQSL---GVRDATFRAARTRMHRTDHTIPPQEAL-----EKGRYLWAPRKERSDK-----MDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLV-EPKVSQCACQIHTQQGLYLKAFEMLM---------------------PAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSF-SEALA------CEKVDFLEEDRGGRFEHWGRKPA---------CVAMECSEC----------GFGNPGGIPMNCDALG-------------SMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKKYLHHHELAKWQRQAHNMCLATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGAILIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHDTEAAADFLKAYAEAKE-DGGGHFSTWSPYRIRRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESSGVSVEVQKE-SGVPPLVGGENEVVVNPLRWQADESIVLTVPA--VTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKYEGMVGMVKDVSG--KHKVTRTSCG 1527
BLAST of mRNA_P-littoralis_Contig123.119.1 vs. uniprot
Match: A0A6H5K491_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K491_9PHAE) HSP 1 Score: 446 bits (1147), Expect = 6.200e-140 Identity = 270/601 (44.93%), Postives = 351/601 (58.40%), Query Frame = 3
Query: 1266 PRRQLMVTGDKAFSLFLKWPQYLTLREELL*ENGAFKDPGRTTFLSTRCGCLGGSGRVFCCVLCPYRGRGGVVAFFPLLYF*AKRWSFD*RFVCFHCSFPPSTFHAHCYFLQWSQRCSSARAKFTRSRVFISKPLVG*WPPYTTTVTARAAGAMGWFARSGRRCAKGCTSFRKRCVARRLTCCRGTRRVGLSTSVGSQRALPQNARAVGLTAPTASPLTARRSRSTRTSTW----DGSASRTKKWRTERCTRSSR-------YLNKGLSYMEHHELPKWQRNAHNMSMLTFAHGTLLVETDLIEKYRHEASSILTCATAPTTSMMVALVHHTPDGNGRHTTDAWTFLSADRNHDFDFHIYATDIVIKYYTEWEGRAATAGVPLPLLLIWTDGYGKQYKGKRNFHAVGQSLHRLGCLLVHNFAVTSHFKGAHDGIGGLLKTLMRDADKKGLRIHDTAAAHDFLSAYAKSKEEDEGGYLGAWSPYKVASFKMELIGAKEIPRPPIDLTGIPGSSKLYRFMGPEEQPPRLGVCVGVQTAVEGSVEVANGERELVPNARFLAAEGWSAHPPLELAKRQYRCRVRQASCYCSKCRVGEYPECMVAK 3035
PRRQLMV GD+ + FLKWP+YL L+ ELL E+ +F DPGRT FLSTRCGCL ++ C C + G+ +L A + D C+ + C +W C + S+ L V G F GR+ A CVA + C G+ +P N A+G S + R W D K + ++ ++ + ++ Y+ HHEL KWQR AHNM + TF G LLVETD IEKY+HEA ++LTCATAP+T+MMVALVHH+PD +GRH TDAW F+S+D NHDFDFHIYA DI+++YY +GRAATAG P+P + I+TDG KQYKGK NF+AV +SLHRLG +L+HNFAVTSHFKGAHDGIGGLLK L+R+A+K+G RIH+T AA DFL YA++KE D GG+ +WSPY++ F ++L+G +EIPRP +DLTGI GSSKLY+FMG E Q VGV+ E V + GE+E+V N + A+ S L ++Y+ RVRQASCYCS C VG Y +C+ AK
Sbjct: 73 PRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLV-EPKISPCA-CQIHTQQGLYLKVEMLM-PAMHSNCD-------CTCKRCDGGSGCG--KWMAMCKDLHS--------FSEALA------CEKVDFLEEDRGGKFEHWGRKPA---------CVAMECSEC----------GFGNPGGIPMNCDALG-------------SMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNMCLATFGKGELLVETDFIEKYKHEAGAVLTCATAPSTTMMVALVHHSPDDDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKHNFYAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHNTQAAADFLQVYAEAKE-DGGGHFSSWSPYRIKRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESS-GVGVEVQTENGVPLVGGEKEVVANPQRWQADE-STVLTLPTVTKRYKLRVRQASCYCS-CSVGAYDDCVPAK 611
BLAST of mRNA_P-littoralis_Contig123.119.1 vs. uniprot
Match: A0A6H5KY26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY26_9PHAE) HSP 1 Score: 397 bits (1020), Expect = 2.250e-122 Identity = 249/565 (44.07%), Postives = 325/565 (57.52%), Query Frame = 3
Query: 1266 PRRQLMVTGDKAFSLFLKWPQYLTLREELL*ENGAFKDPGRTTFLSTRCGCLGGSGRVFCCVLCPYRGRGGVVAFFPLLYF*AKRWSFD*RFVCFHCSFPPSTFHAHCYFLQWSQRCSSARAKFTRSRVFISKPLVG*WPPYTTTVTARAAGAMGWFARSGRRCAKGCTSFRKRCVARRLTCC---RGTRR---------VGLSTS---VGSQRALPQNARAVGLTAPTASPLTARRSRSTRTSTW----DGSASRTKKWRTERCTRSSR-------YLNKGLSYMEHHELPKWQRNAHNMSMLTFAHGTLLVETDLIEKYRHEASSILTCATAPTTSMMVALVHHTPDGNGRHTTDAWTFLSADRNHDFDFHIYATDIVIKYYTEWEGRAATAGVPLPLLLIWTDGYGKQYKGKRNFHAVGQSLHRLGCLLVHNFAVTSHFKGAHDGIGGLLKTLMRDADKKGLRIHDTAAAHDFLSAYAKSKEEDEGGYLGAWSPYKVASFKMELIGAKEIPRPPIDLTGIPGSSKLYRFMGPEEQPPRLGVCVGVQTAVEGSVEVANGEREL 2882
PRRQLMV GD+A+ FLKWP+YL L+ ELL E+ +F DPGRT FLSTRCG S + + P + G PL F S +C + P C + + + + ++ + P + T +G W A K SF + ++ C RG R V + S G+ +P N A+G S + R W D K + ++ ++ + ++ Y+ HHEL KWQR AHNM + TF+ G LLVETD IEKY+HEA +ILTCATAP+T+MMVALVHH+PD +GRH TD W +S+D NHDFDFHIYA DI+++YY +GRAATAG P+P + I+TDG KQYKGKRNFHAV +SLHRLG +L+HNFAVTSHFKGAHDGIGGLLK L+R+A+K+G RIHDT AA DFL AYA++KE D GG+ WSPY++ F ++L+G +EIPRP +DL GI GSSKLY+FM E Q VGV+ E V + GE+E+
Sbjct: 14 PRRQLMVAGDQAWRKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGDR--SSVMDSSAVSPPQEDGLFAD--PLSSF----LSVSTVRLC--VTVEPKVSQCAC-------QIHTQQGLYLKAFEMLM-PAMHANCDCTCKWCDGGSGCGKWMAMC-----KDLHSFSEALDCEKVDCLEEDRGGRFEHWGGKPACVAMECSECRFGNPDDIPMNCDALG-------------SMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLGDLWKEFVEHSKKYIHHHELAKWQRQAHNMCLATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDDGRHETDTWVVVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHDTEAAADFLKAYAEAKE-DGGGHFSTWSPYRIRRFHIKLLGHREIPRPFVDLMGISGSSKLYQFMAAEVQEEESS-GVGVEVQKENGVPLVGGEKEV 540
BLAST of mRNA_P-littoralis_Contig123.119.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE) HSP 1 Score: 396 bits (1017), Expect = 4.500e-117 Identity = 356/1036 (34.36%), Postives = 472/1036 (45.56%), Query Frame = 3
Query: 132 QSQFVEQKES*NTRGISTPAGTTLTSVLLKAGSVQHAGKGESAVVEGRDESAVEEAGRKHVDTLKQRAEQRISRKAAAAAAASTR----AKRRLGADAALSRSSSLATAIVTGSKRTGRDSEAERSRVQTVISSVSGTNKLTAVSVFRWMPPVGCAARATALCHTTTLILACFPPSPRKTLLLQQAQEKHRADVVEMVEKDPVLKEQIREVLGRGDK----GRVDAVNAENTCALADSL------ASSELNYKTRATPAASRITPCWRRPLEQGSTRALLATRYATPPTGALPLYRREASRLPSGRGALA*E-QTLSVRHTSGCTAPTTPSLRLRRWKRGAT---------AGQQDQERRDGPTRVGL-GVSVLALGRRL---TCVGRLRETKHVSTFQEGR-RGVP--PRRQLMVTGDKAFSLFLKWPQYLTLREELL*ENGAFKDPGRTTFLSTRCGCLGGSGRVFCCVLCPYRGRGGVVAFFPLLYF*AKRWSFD*RFVCFHCSFPPSTFHAHCYFLQWSQRCSSARAKFTRSRVFISKPLVG*WPPYTTTVTARAAGAMGWFARSGRRCAKGCTSFRKRCVARRLTCCRGTRRVGLSTSVGSQRALPQNARAVGLTAPTASPLTARRSRSTRTSTW---------DGSASRTKKWRTERCTRSSRYLNKGL--SYMEHHELPKWQRNAHNMSMLTFAHGTLLVETDLIEKYRHEASSILTCATAPTTSMMVALVHHTPDGNGRHTTDAWTFLSADRNHDFDFHIYATDIVIKYYTEWEGRAATAGVPLPLLLIWTDGYGKQYKGKRNFHAVGQSLHRLGCLLVHNFAVTSHFKGAHDGIGGLLKTLMRDADKKGLRIHDTAAAHDFLSAYAKSKEEDEGGYLGAWSPYKVASFKMELIGAKEIPRPPIDLTGIPGSSKLYRFMGPEEQPPRL--------GVCVGVQTAVEGSVEVANGERELVPNARFLAAEGWSAHPPLELAK--RQYRCRVRQASCYCSKCRVGEYPECMVAKTYPELVGMVKYGTGYE 3083
+ + V Q+ + RGI L S LL+ G+ + AGK +VV DE + E GR+HV+ +++RA +R R+ A AKR+ GADAALS +LA G R+G E R + E+ R+ +++++ DPVL E++R +L G +V A++A NT AL SL +S + + T T A A A + T +R + SG +LA +L +RH + A RW+ T A + + TR + V+AL R V R ++E + R P PRRQLM GD + +FL+ +YL L+ LL ++ F DPGRTTFLSTRCGCL C C + + + L F D C C C +WS C +KF+ + V + G F GR+ A C A + + C G +P N A+ R W DG KK + + + ++ + SYMEHH L KWQR AH M M T G LL+ETD IEKYRHEA +LTCATAPTT+MMVALVHH+PD G H TDAW FLS+D NHDFDFH A ++V+ +YT AATAG P + ++TDG GKQYKGKRNF AV QSL RLG ++HNFAVTSHFKG HDGIG L+K L+R+A+ G RI D AH+FL YA ++ G+ WSPY++ SF++ G KEIPRPPIDLTGIPGSSKLY F G E++ + VGVQT + V A G++ L AR + A K R ++ RVR ASCYCS CR+G Y +CMVAK YP+LVG V +G E
Sbjct: 12 EERVVRQQRKNHIRGI------LLISQLLRKGTTEAAGKPVQSVV--ADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXXAKRK-GADAALSDPLALAH---DGGTRSGATPETSRE---------------------------------------------------------EAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAV----------------AAGAGEHTCTDTDVCHPGQR-CKPVESGGVSLAERANSLGIRHETFSDA---------RWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGKDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCA--CQIHTQQTL--YLEALSFLMGSIHQDCDCECNWCD------DLGCK--RWSVMCQDL-SKFSDALA-------------CEKVNLLEGDSDGGFEFWGRKPA---------CAAMKCSEC----------GFGKPGGIPTNCTAIAKNRE-------------RVVAWIRFEDQTMPDGKVH--KKQQLPQTGKLEDLWDEFMAHSYMEHHALAKWQRQAHKMCMATLRQGELLIETDFIEKYRHEARVVLTCATAPTTTMMVALVHHSPDNRGEHETDAWIFLSSDPNHDFDFHHAAMEVVVAHYTTGPKSAATAGSAAPRVHMFTDGCGKQYKGKRNFRAVAQSLRRLGVRILHNFAVTSHFKGTHDGIGALMKRLLRNAEMHGTRIPDVDVAHEFLLGYAVEADKAREGHFTTWSPYRIKSFEVRKFGPKEIPRPPIDLTGIPGSSKLYFFTGTEDEQEDVQDTFSLVWATSVGVQT--DDFVVGAAGDKVLT--ARKWVVDESRARXXXAPKKFTRSWKLRVRGASCYCSTCRIGCYGDCMVAKVYPDLVGEVMEKSGKE 888
BLAST of mRNA_P-littoralis_Contig123.119.1 vs. uniprot
Match: A0A6H5K6N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N6_9PHAE) HSP 1 Score: 366 bits (939), Expect = 2.400e-113 Identity = 173/286 (60.49%), Postives = 217/286 (75.87%), Query Frame = 3
Query: 2019 YLNKGLSYMEHHELPKWQRNAHNMSMLTFAHGTLLVETDLIEKYRHEASSILTCATAPTTSMMVALVHHTPDGNGRHTTDAWTFLSADRNHDFDFHIYATDIVIKYYTEWEGRAATAGVPLPLLLIWTDGYGKQYKGKRNFHAVGQSLHRLGCLLVHNFAVTSHFKGAHDGIGGLLKTLMRDADKKGLRIHDTAAAHDFLSAYAKSKEEDEGGYLGAWSPYKVASFKMELIGAKEIPRPPIDLTGIPGSSKLYRFMGPEEQPPRLGVCVGVQTAVEGSVEVANGER 2876
++ Y+ HHEL KWQR AHNM + TF G LLVETD IEKY+HEA ++LTCATAP+T+MMVALVHH+PD +GRH TDAW F+S+D NHDFDFHIYA DI+++YY +GRA TAG P+P + I+TDG KQYKGKRNF+AV +SLHRLG +L+HNFAVTSHFK A DGIGGLLK L R+ +++G RI +T AA DFL YA++KE D GG+ +WSPY++ F ++L+G +EIPRP +DLTGI GSSKLY+FMG E Q VGV+ E + + GER
Sbjct: 25 FVEHSKKYIHHHELAKWQRQAHNMCLATFGKGELLVETDFIEKYKHEAGAVLTCATAPSTTMMVALVHHSPDDDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRADTAGTPVPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGVVLIHNFAVTSHFKSADDGIGGLLKALSRETEERGQRIRNTQAAADFLQVYAEAKE-DGGGHFSSWSPYRIKRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEVESS-GVGVEVQTENGIPLVGGER 308
BLAST of mRNA_P-littoralis_Contig123.119.1 vs. uniprot
Match: A0A6H5KXG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXG9_9PHAE) HSP 1 Score: 373 bits (958), Expect = 1.850e-112 Identity = 267/695 (38.42%), Postives = 341/695 (49.06%), Query Frame = 3
Query: 1281 MVTGDKAFSLFLKWPQYLTLREELL*ENGAFKDPGRTTFLSTRCGCLGGSGRVFCCVLCPYRGRGGVVAFFPLLYF*AKRWSFD*RFVCFHCSFPPSTFHAHC-YFLQW---SQRCSSARAKFTRSRVFISKPLVG*WPPYTTTVTARAAGAMGWFARSGRRCAKGCTSFRKRCVARRLTCCRGTRRVGLSTSVGSQRALPQNARAVGLTAPTASPLTARRSRSTRTSTWDGSASRT----KKWRTERCTRSSRYLNKGLSYMEHHELPKWQRNAHNMSMLTFAHGTLLVETDLIEKYRHEASSILTCATAPTTSMMVALVHHTPDGNGRHTTDAWTFLSADRNHDFDFHIYATDIVIKYYTE--------------------------------W----------------------------EGRAATAGVPLPLLLIWTDGYGKQYKGKRNFHAVGQSLHRLGCLLVHNFAVTSHFKGAHDGIGGLLKTLMRDADK-----------------------------------KGLRIHDTAAAHDFLSAYAKSKEEDEGGYLGAWSPYKVASFKMELIGAKEIPRPPIDLTGIPGSSKLYRFMGPEEQPPRL-GVCVGVQTAVEGSVEVANGERELVPNARFLAAEGWSAHPP----LELAKRQYRCRVRQASCYCSKCRVGEYPECMVAKTY 3041
MV GD+ + FLKWP+Y+ L+ ELL E+ +F DPGRT FLSTRCGC +V C + +G + F +L P+T HA+C +W C A F S+ L V G F GR+ A CVA + C G+ +P N A+G S + R W A + K + ++ + + + ++EH + +R AHN+ + TF+ G LLVETD IEKY+HEA +ILTCATAP+T+MMVALVHH+PD NGRH TDAW F+S+D NHDFDFHIYA DI+++YY W +GRAATAG P P + I+TDG KQYKGKRNFHAV +SLHRLG +L+HNFAVTSHFKGAHDGIGGLLK L+R+A +G RIHDT AA DF+ AYA++KE D GG+ WSPY++ F ++L+G +EIPRP +DLTGI GSSKLY+FMG E Q GV V VQ + S VAN +R W A L ++Y+ RVRQASCYCSKC VG Y +C+ AK Y
Sbjct: 1 MVAGDQVWHKFLKWPEYMGLKAELLREDSSFTDPGRTLFLSTRCGCSV-EPKVSKCACQTHTQQGIDLKAFEMLM--------------------PAT-HANCDCTCKWCDGGSGCGKWMAMCKDLHSF-SEALA------CEKVDFLEEDRGGRFEHWGRKPA---------CVAMECSEC----------GFGNPGGIPMNCDALG-------------SMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSK----KRQAHNICLATFSKGALLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAATAGTPTPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGAILIHNFAVTSHFKGAHDGIGGLLKALLREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQRIHDTQAAADFVKAYAEAKE-DGGGHFSTWSPYRIRRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESSGVSVEVQ---KESGVVANPQR-------------WQADESIVRTLPAVTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKY 613
BLAST of mRNA_P-littoralis_Contig123.119.1 vs. uniprot
Match: A0A6H5KXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK6_9PHAE) HSP 1 Score: 342 bits (876), Expect = 4.300e-104 Identity = 182/359 (50.70%), Postives = 228/359 (63.51%), Query Frame = 3
Query: 2202 MMVALVHHTPDGNGRHTTDAWTFLSADRNHDFDFHIYATDIVIKYYTEWEGRAATAGVPLPLLLIWTDGYGKQYKGKRNFHAVGQSLHRLGCLLVHNFAVTSHFKGAHDGIGGLLKTLMRDADKKGLRIHDTAAAHDFLSAYAKSKEEDEGGYLGAWSPYKVASFKMELIGAKEIPRPPIDLTGIPGSSKLYRFMGPEEQPPRLGVCVGVQTAVEGSVEVANGERELVPNA-RFLAAEG--------------------------------------------------WSAHPP----LELAKRQYRCRVRQASCYCSKCRVGEYPECMVAKTYPELVGMVKYGTGYERAKMTSVSCG 3113
MMVALVHH+PD +GRH TDAW F+S+D NHDFDFHIYA DI+++YY +GRAATAG P+P + I+TDG KQYKGKRNF+AV +SLHRLG +L+HNFAVTSHFKGAHDGIGGLLK L+R+A+K+G RIH+T AA DFL YA++KE D GG+ +WSPY++ F ++L+G +EIPRP +DLTGI GSSKLY+FMG E Q VGV+ E V + GE+E+V N R+ A E W A L ++Y+ RVRQASCYCSKC VG Y +C+ AK Y +VGMVK +G + K+T SCG
Sbjct: 1 MMVALVHHSPDDDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHNTQAAADFLQVYAEAKE-DGGGHFSSWSPYRIKRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESS-GVGVEVQKEDGVSLVGGEKEVVVNPQRWQADESTVLTLPAVTKRYKLRVRQASCYCSKCSVGAYDDCVPLVGGEKEVVANPQRWQADESTVLTLPAVTKRYKLRVRQASCYCSKCSVGAYDDCVSAKKYAGMVGMVKTVSG--KHKVTRASCG 355
BLAST of mRNA_P-littoralis_Contig123.119.1 vs. uniprot
Match: A0A6H5L780_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L780_9PHAE) HSP 1 Score: 347 bits (891), Expect = 9.640e-103 Identity = 183/334 (54.79%), Postives = 222/334 (66.47%), Query Frame = 3
Query: 2112 GTLLVETDLIEKYRHEASSILTCATAPTTSMMVALVHHTPDGNGRHTTDAWTFLSADRNHDFDFHIYATDIVIKYYTEWEGRAATAGVPLPLLLIWTDGYGKQYKGKRNFHAVGQSLHRLGCLLVHNFAVTSHFKGAHDGIGGLLKTLMRDADKKGLRIHDTAAAHDFLSAYAKSKEEDEGGYLGAWSPYKVASFKMELIGAKEIPRPPIDLTGIPGSSKLYRFMGPEEQPPRL--------GVCVGVQTAVEGSVEVANGERELVPNARFLAAEGWSAHPPLELAK--RQYRCRVRQASCYCSKCRVGEYPECMVAKTYPELVGMVKYGTGYE 3083
G LL+ETD IEKYRHEA +LTCATAPTT+MMVALVHH+PD G H TDAW FLS+D NHDFDFH A ++V+ +YT AATAG P + ++TDG GKQYKGKRNF AV QSL RLG ++HNFAVTSHFKG HDGIG L+K L+R+A+ G RI D AH+FL YA ++ G+ WSPY++ SF++ G KEIPRPPIDLTGIPGSSKLY F G E++ + VGVQT + V A G++ L AR + A K R ++ RVR ASCYCS CR+G Y +CMVAK YP+LVG V +G E
Sbjct: 203 GELLIETDFIEKYRHEARVVLTCATAPTTTMMVALVHHSPDNRGEHETDAWIFLSSDPNHDFDFHHAAMEVVVAHYTTGPKSAATAGSAAPRVHMFTDGCGKQYKGKRNFRAVAQSLRRLGVRILHNFAVTSHFKGTHDGIGALMKRLLRNAEMHGTRIPDVDVAHEFLLGYAVEADKAREGHFTTWSPYRIKSFEVRKFGPKEIPRPPIDLTGIPGSSKLYFFTGTEDEQEDVQDTFSLVWATSVGVQT--DDFVVGAAGDKVLT--ARKWVVDESRARXXXAPKKFTRSWKLRVRGASCYCSTCRIGCYGDCMVAKVYPDLVGEVMEKSGKE 532
BLAST of mRNA_P-littoralis_Contig123.119.1 vs. uniprot
Match: A0A6H5J993_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J993_9PHAE) HSP 1 Score: 326 bits (836), Expect = 5.230e-99 Identity = 164/295 (55.59%), Postives = 213/295 (72.20%), Query Frame = 3
Query: 2229 PDGNGRHTTDAWTFLSADRNHDFDFHIYATDIVIKYYTEWEGRAATAGVPLPLLLIWTDGYGKQYKGKRNFHAVGQSLHRLGCLLVHNFAVTSHFKGAHDGIGGLLKTLMRDADKKGLRIHDTAAAHDFLSAYAKSKEEDEGGYLGAWSPYKVASFKMELIGAKEIPRPPIDLTGIPGSSKLYRFMGPEEQPPRLGVCVGVQTAVEGSVEVANGERELVPNARFLAAEGWSAHPPLELAKRQYRCRVRQASCYCSKCRVGEYPECMVAKTYPELVGMVKYGTGYERAKMTSVSCG 3113
PD +G+H TDAW F+S+D NHDFDFHIYA DI+++YY +GRAATAG P+P + I+TDG KQYKGKRNF+AV +SLHRLG +L+HNFAVTSHFKGAHDGIGGLLK L+R+ +K+G RIH+T AA DFL Y ++KE D GG+ +WSPY+ F ++L+G +EI RP +DLTGI GSSK ++FMG E Q VGV+ +E V + GE+E+V N + A+ + L + KR Y+ RVRQASC+ SKC VG Y +C+ AK Y +VGMVK +G + K+T SCG
Sbjct: 21 PDDDGQHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGNVLIHNFAVTSHFKGAHDGIGGLLKALLREVEKRGQRIHNTQAAADFLQVYPEAKE-DGGGHFSSWSPYRTKRFHIKLLGYREITRPFVDLTGISGSSKQHQFMGAEVQEEESS-GVGVEVQLENDVPLVGGEKEVVANPQRWQADESTVLTLLAVTKR-YKLRVRQASCHRSKCSVGAYNDCVPAKKYAGMVGMVKAVSG--KHKVTRASCG 310 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig123.119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig123.119.1 >prot_P-littoralis_Contig123.119.1 ID=prot_P-littoralis_Contig123.119.1|Name=mRNA_P-littoralis_Contig123.119.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=469bp MGWFARSGRRCAKGCTSFRKRCVARRLTCCRGTRRVGLSTSVGSQRALPQback to top mRNA from alignment at P-littoralis_Contig123:518336..522218+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig123.119.1 ID=mRNA_P-littoralis_Contig123.119.1|Name=mRNA_P-littoralis_Contig123.119.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3883bp|location=Sequence derived from alignment at P-littoralis_Contig123:518336..522218+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig123:518336..522218+ >mRNA_P-littoralis_Contig123.119.1 ID=mRNA_P-littoralis_Contig123.119.1|Name=mRNA_P-littoralis_Contig123.119.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1407bp|location=Sequence derived from alignment at P-littoralis_Contig123:518336..522218+ (Pylaiella littoralis U1_48)back to top |