mRNA_P-littoralis_Contig123.108.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig123.108.1
Unique NamemRNA_P-littoralis_Contig123.108.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig123.108.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 695 bits (1793), Expect = 6.800e-251
Identity = 330/331 (99.70%), Postives = 330/331 (99.70%), Query Frame = 3
Query:   75 KNDTSTCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEED 1067
            KNDTSTCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFAT QRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEED
Sbjct:   57 KNDTSTCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEED 387          
BLAST of mRNA_P-littoralis_Contig123.108.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 513 bits (1321), Expect = 4.490e-180
Identity = 242/333 (72.67%), Postives = 278/333 (83.48%), Query Frame = 3
Query:   69 RRKNDTSTCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEED 1067
            R++ +   CAWAQ+LED+DL+D  SI++K+FR DFRVP  FFLRLV LVK KDWF T+  DA  R+ HPVEHKVLA LTILGRGN F SIY +SWMS  TVQ +FH+FC+HFA EMYDEHI+LPSE+NGELD VM QY++LGF GAMGS DVTHIGWS+CPYN  RSYTGKEG PTVGYQVTVNHAGR +AVTEGFT STNDKT +C D  V++IRTD QY EK F V+ +DGTT TLKGCYL+VDNGYHKW++L+EP+KYPLSE D+LFSKRLESVRKDVECFFGILK  FRI K+AM Y +QER+D VFFTCCILHNMLHT DGM  L E+
Sbjct:   26 RKRKEVEKCAWAQMLEDKDLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVEN 358          
BLAST of mRNA_P-littoralis_Contig123.108.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 480 bits (1236), Expect = 2.010e-166
Identity = 239/348 (68.68%), Postives = 267/348 (76.72%), Query Frame = 3
Query:  108 VLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYA----------------------------EKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEED 1067
            +LED+DL+D TSI AK+ R DFRVPY  FLRLV LVK K+WF+TA  DA G   HPVEHKVLA LTILGRGN F SIY +SWMS  TVQ +FH+FC HFA EMYDE I LP+EE+G+LD VM QY++LGF GA+GS DVTHI WSRCPYNQ RSYTGKEG PT+ YQVTV+HAGR +AVTEGFTGSTNDKTI+C D AV++I TDK Y                             EK F V+ +DGTT TLKGCYL+VDNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTC ILHNMLHT DGM  L E+
Sbjct:   26 LLEDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVEN 373          
BLAST of mRNA_P-littoralis_Contig123.108.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 428 bits (1101), Expect = 2.680e-145
Identity = 219/358 (61.17%), Postives = 266/358 (74.30%), Query Frame = 3
Query:   12 DAEAEPDEEPRREKRGRRKRRKNDTSTCAWA-QVLEDEDLK-----DPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEED 1067
            D ++E +EE  RE + RR   + D +   WA Q+ E +DL+     DPTS  A++FRE FR+PYPFF+ LV LVK++DWF T ++DA GRR  PV+ KVLACL IL RGN F  IY++S++S  T    FH+F  +FA EMY EHIFLP+ +  +  +VM QY++LGF GA GSTDVTHI W  CPYNQ RSYTGKEG PTV YQVTV+H  RVLAVT GFTGSTNDK+II  D AV +IR D  Y+EK FTV++ DGT   LKGCYL+VDNGYHKW  LI PSKYP+ + DL FSKRLESVRKDVECFFGI+K RFRILKL++ Y KQE +D VFFTCCILHNMLH++D    +EE+
Sbjct:   61 DPDSEEEEEDNREIKRRRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEE 416          
BLAST of mRNA_P-littoralis_Contig123.108.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 424 bits (1089), Expect = 2.880e-143
Identity = 209/352 (59.38%), Postives = 263/352 (74.72%), Query Frame = 3
Query:   18 EAEPDEEPRREKRGRRKRRKNDTSTCAWAQVLEDEDL--KDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEED 1067
            + E DE  R  KR R   RK+ T +  W +++E  +    D T+  A++FR +FRVPYPFF+ LVELV+ +DWF T + D  GR+  PVE KVLACL IL RGNVF  IY++S++S  TV   FH+FC++FA E+YDE+++LP+ E+  L +VM QY+++GFPGA+GSTDVTHI W  CPYNQ R YTGKEGKPTV +QVTV+H+GRVLAVT GFTG+TNDKTII  D+AV RIRTD  Y E+ + ++ +DG     KGCYL+VDNGYHKWR LI PSK P+   DL+FSKRLES RKDVEC+FGILK RFRI KLA+ + KQE +D VFFTCCILHNMLH+ D  G + E+
Sbjct:   83 DTEDDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEE 432          
BLAST of mRNA_P-littoralis_Contig123.108.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 2.030e-134
Identity = 207/341 (60.70%), Postives = 239/341 (70.09%), Query Frame = 3
Query:   48 EKRGRRKRRKNDTSTCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSR-CPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEED 1067
            E+  R +R++ D  TCAWAQ+LED+DL+D TSI AK+FR DFRVPY FFLRLV LVK K+WF  A  DA GR  HPVEHKVLA LTILGR N F SI+ +SWMS  TVQ +FH+FC HFA +MYDEHI L +EE+G+LD V+                    GW   CPYNQ RSYTGKEG PT+ YQV                      TI+C D AV++IRTDKQY EK F V+ +DGTT TLKG YL+VDNGYHKW++LIEPSKYPLSE DLLFSKRL+SVR+D     GILK RFRILKLAM YQ QER+D VFFTCCI+HNMLHT DGM  L E+
Sbjct:   93 ERLARSQRQRKDVETCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKSKNWFLAAATDAVGRASHPVEHKVLAWLTILGRNNCFASIFQVSWMSAKTVQGMFHKFCRHFARDMYDEHIHLLAEESGKLDHVV------------------RSGWVYGCPYNQARSYTGKEGFPTIAYQVV---------------------TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGWYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGMDQLVEN 394          
BLAST of mRNA_P-littoralis_Contig123.108.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI)

HSP 1 Score: 390 bits (1003), Expect = 1.520e-131
Identity = 188/283 (66.43%), Postives = 223/283 (78.80%), Query Frame = 3
Query:    6 LSDAEAEPDEEPRREKRGRRKRRKNDTSTCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYP 854
            LS  E +   +  R +  R +R++     CAWA++LED+DL++  S  +K+FR DFRVP  FFLRLV LVK K+WFATA  DA GR+ HPVEHKVLA LTILGRGN F SIY +SWMS  TVQ +FH FC+HFA EMYDEHI+LPSE+NGELD VM QY++LGF GAMGS DVTHI W++CPYN  RSYTGKEG PT+GYQVTVNHAGR  AVTEGFTGSTNDKTI+C D AV++IRTDKQY EK F V+ +DGTT TLKGCYL+VDNGYHKW++L+   + P
Sbjct:   32 LSQEEEDTAPDLTRPRLSRTQRQRKYVERCAWARMLEDKDLEESNSRTSKQFRLDFRVPCAFFLRLVALVKSKNWFATAGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVP 314          
BLAST of mRNA_P-littoralis_Contig123.108.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 372 bits (955), Expect = 2.040e-125
Identity = 182/261 (69.73%), Postives = 206/261 (78.93%), Query Frame = 3
Query:  285 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEED 1067
            +VLA LTILG+GN F SI+ +SWMS  TVQ VFH+FC  FA EMYDEHI LP+EE+G+L  VM QY++LG                 CPYNQ RSYTGK+  PT+ YQVTV+HA R +AVTEGFTGSTNDKTI+C D AVD+IRTDKQY EK F ++ +DGTT TLKGCY + DNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHNMLHT DGM  L E+
Sbjct:   20 QVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVEN 263          
BLAST of mRNA_P-littoralis_Contig123.108.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 1.430e-121
Identity = 169/218 (77.52%), Postives = 190/218 (87.16%), Query Frame = 3
Query:  414 MYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEED 1067
            MYDEHI LP+EE+G+LD V+ QY++LGF GAMGS DVTHI WSRCPYNQ RSYTGKEG PT+GYQVTV+HAGR +AVTEGFTGSTNDKT +C D AV++IRTDKQY EK F V+ +DGTT TLKGCY++VDNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK R RIL LAM +Q QER+D VFFTCCILHNMLHT DGM  L E+
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVEN 218          
BLAST of mRNA_P-littoralis_Contig123.108.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 3.450e-120
Identity = 173/274 (63.14%), Postives = 212/274 (77.37%), Query Frame = 3
Query:  249 DAYGRRCHPVEH-KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEED 1067
            D   R C P  H +VLACL IL RGNVF  IY++S++S  TV   FH+FC++FA E+YDE+++LP+ E+  L +VM QY+++GFPGA+GSTDVTHI W  CPYNQ R YTGKEGKPTV +QVTV+H+GRVLAVT GFTG+TNDKTII  D+AV RIRTD  Y E+ + ++ +DG     KGCYL+VDNGYHKWR LI PSK P+   DL+FSKRLES RKDVEC+FGILK RFRI KLA+ + KQE +D VFFTCCILHNMLH+ D  G + E+
Sbjct:   70 DLSARCCFPPPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEE 341          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig123.108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBE2_9PHAE6.800e-25199.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE4.490e-18072.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE2.010e-16668.68DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JAU4_9PHAE2.680e-14561.17Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE2.880e-14359.38Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0X4_9PHAE2.030e-13460.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPI7_ECTSI1.520e-13166.43Transposon protein, putative, Pong sub-class n=1 T... [more]
A0A6H5JUX7_9PHAE2.040e-12569.73DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI1.430e-12177.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KY50_9PHAE3.450e-12063.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig123contigP-littoralis_Contig123:488949..491206 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size1067
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.35e-122
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size1065
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789536.9772103-CDS-P-littoralis_Contig123:488948..4891941680789536.9772103-CDS-P-littoralis_Contig123:488948..489194Pylaiella littoralis U1_48CDSP-littoralis_Contig123 488949..489194 -
1680789536.9897838-CDS-P-littoralis_Contig123:489394..4899281680789536.9897838-CDS-P-littoralis_Contig123:489394..489928Pylaiella littoralis U1_48CDSP-littoralis_Contig123 489395..489928 -
1680789536.9991663-CDS-P-littoralis_Contig123:490919..4912041680789536.9991663-CDS-P-littoralis_Contig123:490919..491204Pylaiella littoralis U1_48CDSP-littoralis_Contig123 490920..491204 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789537.008056-UTR-P-littoralis_Contig123:491204..4912061680789537.008056-UTR-P-littoralis_Contig123:491204..491206Pylaiella littoralis U1_48UTRP-littoralis_Contig123 491205..491206 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig123.108.1prot_P-littoralis_Contig123.108.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig123 488949..491204 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig123.108.1

>prot_P-littoralis_Contig123.108.1 ID=prot_P-littoralis_Contig123.108.1|Name=mRNA_P-littoralis_Contig123.108.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=355bp
MLSDAEAEPDEEPRREKRGRRKRRKNDTSTCAWAQVLEDEDLKDPTSIAA
KKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACL
TILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEEN
GELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVG
YQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTV
HKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVR
KDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMG
GLEED
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mRNA from alignment at P-littoralis_Contig123:488949..491206-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig123.108.1 ID=mRNA_P-littoralis_Contig123.108.1|Name=mRNA_P-littoralis_Contig123.108.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2258bp|location=Sequence derived from alignment at P-littoralis_Contig123:488949..491206- (Pylaiella littoralis U1_48)
ACATGCTGTCAGATGCCGAGGCCGAACCTGACGAGGAACCCCGGCGCGAG AAGCGCGGTCGAAGGAAGAGAAGGAAGAACGACACCAGCACGTGTGCTTG GGCGCAGGTGCTGGAGGATGAAGACCTAAAGGATCCTACAAGCATAGCGG CGAAGAAGTTTCGAGAGGACTTTCGCGTCCCCTACCCCTTTTTTCTGCGG CTTGTGGAGTTGGTGAAGAAGAAGGATTGGTTCGCCACCGCGCAGCGCGA CGCGTATGGGCGGCGATGCCACCCAGTGGAGCACAAAGTGAGCTTGACGA GGTTGATCACTCGTGGGTTGTGGCTTGTGTACAGCAGTAGTTTTACTGCA CTAGCAGACTCGGGGTGCGTTGAATTGAAGGAGGCGATATTCCAAAATGG ATGATACCAAAAAAGTAGCTGATACTGCTGTAGTATGTTTGTGTGTGAGA GAGAGAGAGAGCGAGAGAGGGAGCTGCTCTCTCTCTTATACTGCTGTTGA TGAACCCGCACCTGCTCTCTCTCTCTACTGCTGTTGATGAACCTGTGCAG CAGCAACGACTCTTCTTTTCACTATACAGCAGTACCCGGTACTCCATACA GCAGTATTGGCTACATCTGTCTGGATCGCATTCTAGTGCTGTACAGCAGT ACTGGAATATATTTTTCGTTTGTGTCACATGATGTGATATGATACAGCAG TCGCCTCTGTCGGCTATATCATACCTTGTACTCCGTAGTACATGCTGTAT CTGTCTAGATCGGATGTAGAGCTGTAGGCTACAGCAGTAGCTTTTGTATC ATATCATATGATACAGCAGTCGCCTTTGTCGGCTACGTCATACCTGGTAC TCCGTACAGCAATACAGGGGACATACTCGTATTTTTGGATCCCTTTTTTG TTTGTATCATATGATATGATACAGCAGCCGCCGCTGTCGGCTATATCATA CCTGGTACCTGGAACTCCGTGCAGCAGTACATCTACATCTGTCTGGATCG CATTCTAGTGCTGTACAGCAGTAGCTCTTTCAGCCGCAGAAATATAAGAA GTATATACCGCAACAGGACAATGTCTGGATCACACTACTGGAATATTTGT ATCACAGCGGTGGCCCTGTTGGTTGTGTCATGCAACAGCAGGTGTTCTGT CTGGAACGCCTATTCCTTTGCCTGTTTTGTGCTACGCACGCGCGCCAGGG TAACAACGTTGCTAATTCGTCTGCACCCTGCCCCCCCCCCCCCCCAATGA ACACATGTTGCGAATGGTGCTGCCGTAGGTGCTGGCGTGTCTGACTATAC TGGGCAGGGGGAATGTATTCGGAAGCATCTACAACCTTTCGTGGATGAGC ACCCCGACAGTGCAGAAGGTGTTCCACCAGTTCTGCGAGCACTTCGCAAC CGAGATGTACGACGAGCACATCTTCCTTCCCAGCGAGGAGAACGGCGAGC TGGATCGCGTCATGGGACAGTACGAGAAGCTGGGGTTCCCGGGCGCAATG GGTTCAACGGACGTCACCCATATCGGGTGGAGTAGGTGCCCGTACAACCA AGGACGTTCTTACACCGGTAAGGAAGGCAAGCCTACGGTCGGATACCAGG TGACGGTCAACCACGCTGGGCGTGTGCTGGCCGTGACAGAGGGGTTCACT GGGTCCACCAACGACAAGACCATCATCTGCTGTGATGAAGCGGTAGACAG AATTCGGACCGACAAGCAGTACGCCGAAAAACCATTCACAGTCCACAAAA AGGATGGTACCACGGAAACCCTGAAGGGGTGCTACCTCATCGTCGACAAT GGTTACCACAAGGTGAAAAAATGTAAAGTACCACACGAAATGTCGGGGGG GTTTTCACGAGCACGCCTTGTTTGTCGGCCAACCTACACTATCATCCCGG TTGGTCGAGCTCCATGCCGTGGGTTTGACGTGCGACAATGAACGCGGTAT GACACACAGAAGGTTAATATTTCCCCTTCTCTCCTTTGGTTTGTTTCGGT CCTTTCATGCAGTGGCGGATGCTCATTGAACCCTCGAAGTACCCGTTGAG CGAGGCTGACTTGCTGTTCTCGAAGAGGCTGGAGAGCGTGCGCAAGGATG TGGAGTGTTTTTTCGGCATCCTGAAGATGCGCTTCAGAATCCTGAAGCTC GCCATGACCTACCAGAAGCAGGAGCGCCTCGACTACGTCTTCTTCACATG CTGTATCCTGCACAACATGCTCCATACGCATGACGGCATGGGCGGCCTGG AGGAGGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig123:488949..491206-

>mRNA_P-littoralis_Contig123.108.1 ID=mRNA_P-littoralis_Contig123.108.1|Name=mRNA_P-littoralis_Contig123.108.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1065bp|location=Sequence derived from alignment at P-littoralis_Contig123:488949..491206- (Pylaiella littoralis U1_48)
ATGCTGTCAGATGCCGAGGCCGAACCTGACGAGGAACCCCGGCGCGAGAA
GCGCGGTCGAAGGAAGAGAAGGAAGAACGACACCAGCACGTGTGCTTGGG
CGCAGGTGCTGGAGGATGAAGACCTAAAGGATCCTACAAGCATAGCGGCG
AAGAAGTTTCGAGAGGACTTTCGCGTCCCCTACCCCTTTTTTCTGCGGCT
TGTGGAGTTGGTGAAGAAGAAGGATTGGTTCGCCACCGCGCAGCGCGACG
CGTATGGGCGGCGATGCCACCCAGTGGAGCACAAAGTGCTGGCGTGTCTG
ACTATACTGGGCAGGGGGAATGTATTCGGAAGCATCTACAACCTTTCGTG
GATGAGCACCCCGACAGTGCAGAAGGTGTTCCACCAGTTCTGCGAGCACT
TCGCAACCGAGATGTACGACGAGCACATCTTCCTTCCCAGCGAGGAGAAC
GGCGAGCTGGATCGCGTCATGGGACAGTACGAGAAGCTGGGGTTCCCGGG
CGCAATGGGTTCAACGGACGTCACCCATATCGGGTGGAGTAGGTGCCCGT
ACAACCAAGGACGTTCTTACACCGGTAAGGAAGGCAAGCCTACGGTCGGA
TACCAGGTGACGGTCAACCACGCTGGGCGTGTGCTGGCCGTGACAGAGGG
GTTCACTGGGTCCACCAACGACAAGACCATCATCTGCTGTGATGAAGCGG
TAGACAGAATTCGGACCGACAAGCAGTACGCCGAAAAACCATTCACAGTC
CACAAAAAGGATGGTACCACGGAAACCCTGAAGGGGTGCTACCTCATCGT
CGACAATGGTTACCACAAGTGGCGGATGCTCATTGAACCCTCGAAGTACC
CGTTGAGCGAGGCTGACTTGCTGTTCTCGAAGAGGCTGGAGAGCGTGCGC
AAGGATGTGGAGTGTTTTTTCGGCATCCTGAAGATGCGCTTCAGAATCCT
GAAGCTCGCCATGACCTACCAGAAGCAGGAGCGCCTCGACTACGTCTTCT
TCACATGCTGTATCCTGCACAACATGCTCCATACGCATGACGGCATGGGC
GGCCTGGAGGAGGAC
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