prot_P-littoralis_Contig123.86.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig123.86.2
Unique Nameprot_P-littoralis_Contig123.86.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length348
Homology
BLAST of mRNA_P-littoralis_Contig123.86.2 vs. uniprot
Match: A0A6H5L5W0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W0_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 5.410e-38
Identity = 125/289 (43.25%), Postives = 152/289 (52.60%), Query Frame = 0
Query:    1 MGRGQLKYRARGGRGGHSLXXXXXXXXXXXXXXDDNGTTSSAGVPTRTKRRGGGSHD-TSHLPSNTELWGLSFAEDNQEEQGNQ-REPPLTSVLGSRETERLLNESEWAIGASSWRVASAAPREDDLGEWGATPAAAAAAAASGEFLSLNLDMLEKCLLRIPVHERLRLPLAYTAQLEEVATQEDPALEPAAVLPTSKGXXXXXXVEHLRRVXXXXXXXIEVAVGTGAPNSSREGRDCEIHGGRAVAAVEVAAAATATTADLVEDGEDVVLDALLGLPAAP-PVAPVGA 286
            MGRGQLKYR RGG+G   +                +G++ S  V T+   R    HD TSHLPSNTE WG +F E++ E+ G   R    TS +G  ETERLL+ESEWAIGASS R+A  AP+EDD   +GA        AA GE LSLNL++LE CL  +P HERLRLP A+TAQLE    + +PA  P A  P  +G           R        +   V    P S+  G +    GG   AA   AA AT+     V + E  VLD LLGL AA  P A  GA
Sbjct:    1 MGRGQLKYRKRGGKG---VGGTSRGGQAARGRGSSSGSSESTAVHTKRSGR----HDLTSHLPSNTEKWGRAFGEEHGEQGGGGGRRAISTSAVGVEETERLLDESEWAIGASSRRLA--APQEDDEPSYGAV-------AAPGELLSLNLEVLEVCLRTLPAHERLRLPHAFTAQLETQG-EGNPAPGPTAAFPAGEGE-----AAECARAAASGVGGVPEPV----PGSTPGGGEHVGLGGPGPAA---AAGATSPPLAAVGNDEGAVLDTLLGLQAATGPAAGAGA 260          
BLAST of mRNA_P-littoralis_Contig123.86.2 vs. uniprot
Match: D8LKQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ2_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 7.620e-25
Identity = 127/341 (37.24%), Postives = 155/341 (45.45%), Query Frame = 0
Query:    1 MGRGQLKYRARGGRGGHSLXXXXXXXXXXXXXXDDNGTTSSAGVPTRTKRRGGGSHD-TSHLPSNTELWGLSFAEDNQEEQGNQ-----------------------------------REPPLT----------------SVLGSRETERLLNESEWAIGASSWRVASAAPREDDLGEWGATPAAAAAAAASGEFLSLNLDMLEKCLLRIPVHERLRLPLAYTAQLEEVATQED--PALEPAAVLPTSKGXXXXXXVEHLRRVXXXXXXXIEVAVGTGAPNSSREG-RDCEIHGGRAVAAVEVAAAATATTADLVEDGEDVVLDALLGLPAAPPVAPVGA 286
            MGRGQLKYR RGGRG   +         XXX     G++ S  V T+   R G  HD TSHLPSNTE WG +F E++      +                                   R+ P T                S +G  ETERLL+ESEWAIGASS  +A  A +EDD    GA       AAA GE L+LNL++LE CL  +P HERLRLP A TAQLE   TQ D  PA  P A LP  +G       E  R         +   V    P  +R G ++  + G   +A+    A AT+    +V + E  VLD LLGL  A   A  GA
Sbjct:    1 MGRGQLKYRKRGGRG---VGGTLRGGRAXXXRGSSGGSSESTAVNTK---RSGLRHDLTSHLPSNTEKWGRAFGEEHXXXGRRKARWVGGWMGVFSTRGTPKGAWLGASGLKSWTRVVLRQAPSTTGGXXXXXRGRRAISTSAVGVEETERLLDESEWAIGASSRHLA--ALQEDDEPSHGA-------AAAPGELLALNLEVLEVCLRTLPAHERLRLPHALTAQLE---TQGDGNPAPGPTAALPAREGAA----AECARAAAAAGEGGVPEPV----PGGTRGGDKNAGLGGPGPIAS----AGATSAPLAVVGNDEGAVLDTLLGLQEATGPAAAGA 311          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig123.86.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5W0_9PHAE5.410e-3843.25Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LKQ2_ECTSI7.620e-2537.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig123contigP-littoralis_Contig123:429635..441640 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig123.86.2mRNA_P-littoralis_Contig123.86.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig123 429485..441949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig123.86.2 ID=prot_P-littoralis_Contig123.86.2|Name=mRNA_P-littoralis_Contig123.86.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=348bp
MGRGQLKYRARGGRGGHSLGGRGSGGRGGTGGNDDNGTTSSAGVPTRTKR
RGGGSHDTSHLPSNTELWGLSFAEDNQEEQGNQREPPLTSVLGSRETERL
LNESEWAIGASSWRVASAAPREDDLGEWGATPAAAAAAAASGEFLSLNLD
MLEKCLLRIPVHERLRLPLAYTAQLEEVATQEDPALEPAAVLPTSKGGGG
GGGVEHLRRVGGGGGGGIEVAVGTGAPNSSREGRDCEIHGGRAVAAVEVA
AAATATTADLVEDGEDVVLDALLGLPAAPPVAPVGAANVASDGTGAREYS
CTAVVGRPDRGGVRTSSETGLMGCWCSHDDTILRGMKFFDGPSHSSP*
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