prot_P-littoralis_Contig123.84.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig123.84.1
Unique Nameprot_P-littoralis_Contig123.84.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length522
Homology
BLAST of mRNA_P-littoralis_Contig123.84.1 vs. uniprot
Match: D8LKQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ1_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 1.600e-119
Identity = 276/508 (54.33%), Postives = 306/508 (60.24%), Query Frame = 0
Query:   45 FGEDGMEEARLEPSVLGSIIPNLDPDPPDPARNNAFISSPSPTGAGSKRPVPPSSAADDASILGTPVS-GKVEVGNSTGGSSGLTAAVGAGVTV---GAARGGADEQVVRVAMV--RKRKPRVKHGLRVLLRGTSRCGKSTILWDYCHRAAMAGHRVVLVCLKR-NEGEDLASLPRSMHARGEGDELRGWEASALGRIGIKYVRSRDDLAWYLASLHTLQRKQWPTVIAGKRIVVDDVDKIVETSAXXXXXXXXXXXXXXVGWFGAAALRISALLQDTAEFLDSSRAEVRAIAAAAAATAYESSAGGTP--------VSVAASTPQQATDSGDTGGTATAGTPQPPGNLDEIGSQNGR----GGGASTVALGE----GGRVGVWQEEAAVRVVSTCSTSDRGMVSLYGRFVHAVARVQNTTGPDCFSLRVDPGISTA--PYPFPSPRPPGPRGPHASTGFAPRFTPYGNDRPAGSGDGSGGGVAKVD------VDFVRSPLDGSFALF 521
            FGED M E  LE S+LGSIIP LDP+PP P R     S    T        PP         L  P+S G++    + GG+    A    GV V   G   G A +Q         R RKPRVKHGLRVL+RGT RCGK+TILWDYCHRAA+AGHRVVLVCLK  N+ EDL++LPRSM A GE DELRGWEA ALGRIGIKYVRSRDDLAWYLASLHTL++ QWPTVIA     VDDVDKI+ETSA XXXXXXXXXXXXX        LRI ALLQDTAEF D SRAE    AA AA  A  S+AG TP                Q A      GG  ++   QP GNL  +G +  R     G  S  A G     GGR  +  E AAVRVV+TCSTSDRGM+SLYGRFVH VARVQNTTGPDCFSLRVDPGI TA  P P+  PRP    G   S GFAP FTP+                          V++VRS +DGSFALF
Sbjct:    2 FGEDSMRECPLESSILGSIIPTLDPNPPQPFRKRKNASFADDT-------APPEEPG-----LNPPLSTGRLGAAEAEGGAPRDRAGGDGGVAVSGGGVGEGTAVDQKDEAGSTEGRARKPRVKHGLRVLVRGTCRCGKTTILWDYCHRAAVAGHRVVLVCLKTANDSEDLSNLPRSMRAGGESDELRGWEAIALGRIGIKYVRSRDDLAWYLASLHTLKKSQWPTVIA-----VDDVDKIIETSAGXXXXXXXXXXXXXXX------LRILALLQDTAEFFDKSRAEA---AATAAXXARGSTAGSTPNRXXXXXXXXXXXXXXQPAERGSGGGGNTSSPQSQPSGNLRVVGGEGERFAWTPGEGSRAADGARPKGGGRDDITGEAAAVRVVTTCSTSDRGMLSLYGRFVHVVARVQNTTGPDCFSLRVDPGIGTASAPAPYLRPRPAAASG---SGGFAPGFTPWDGXXXXXXXXXXXXXXXXXXXXHQEVVEYVRSQIDGSFALF 480          
BLAST of mRNA_P-littoralis_Contig123.84.1 vs. uniprot
Match: A0A6H5LPQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPQ2_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.320e-6
Identity = 76/172 (44.19%), Postives = 89/172 (51.74%), Query Frame = 0
Query:  275 VDKIVETSAXXXXXXXXXXXXXXVGWFGAAALRISALLQDTAEFLDSSRAEVRAIAAAAAATAYESSAGGTPVSVAASTPQQ--------ATDSGDTGGTATAGTPQPPGNLDEIGSQN-------GRGGGASTVALGEGGRVG-VWQEEAAVRVVSTCSTSDRGMVSLYGR 430
            +DKI+ETS     XXXXXXXXXX       ALRI ALLQDTAEF D SRAE           A  S+A GTP                  A     +GG  ++   QP G+L  +G +        G G  A+  A  +GG    V  E AAVRVVSTCSTSDRGM++LYGR
Sbjct:    1 MDKIIETSGSGDGXXXXXXXXXXXXX----ALRILALLQDTAEFFDKSRAEAXXXXXX---XARGSTAEGTPNRTTXXXXXXXXXXXXXPADRGSGSGGNTSSPQSQPSGSLRIVGGEGERFAWTPGEGSRAAEGARPKGGGCDDVTGEAAAVRVVSTCSTSDRGMLALYGR 165          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig123.84.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKQ1_ECTSI1.600e-11954.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LPQ2_9PHAE2.320e-644.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..502
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..474
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..394
NoneNo IPR availablePANTHERPTHR28653FAMILY NOT NAMEDcoord: 159..450

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig123contigP-littoralis_Contig123:421315..428496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig123.84.1mRNA_P-littoralis_Contig123.84.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig123 421076..429004 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig123.84.1 ID=prot_P-littoralis_Contig123.84.1|Name=mRNA_P-littoralis_Contig123.84.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=522bp
MKSLSQERAESIALTFTPNPVASQQDDNDRNTSSRSSSRKLLRTFGEDGM
EEARLEPSVLGSIIPNLDPDPPDPARNNAFISSPSPTGAGSKRPVPPSSA
ADDASILGTPVSGKVEVGNSTGGSSGLTAAVGAGVTVGAARGGADEQVVR
VAMVRKRKPRVKHGLRVLLRGTSRCGKSTILWDYCHRAAMAGHRVVLVCL
KRNEGEDLASLPRSMHARGEGDELRGWEASALGRIGIKYVRSRDDLAWYL
ASLHTLQRKQWPTVIAGKRIVVDDVDKIVETSAAGGGGGGGGSGGGGVGW
FGAAALRISALLQDTAEFLDSSRAEVRAIAAAAAATAYESSAGGTPVSVA
ASTPQQATDSGDTGGTATAGTPQPPGNLDEIGSQNGRGGGASTVALGEGG
RVGVWQEEAAVRVVSTCSTSDRGMVSLYGRFVHAVARVQNTTGPDCFSLR
VDPGISTAPYPFPSPRPPGPRGPHASTGFAPRFTPYGNDRPAGSGDGSGG
GVAKVDVDFVRSPLDGSFALF*
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