mRNA_P-littoralis_Contig123.83.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig123.83.1
Unique NamemRNA_P-littoralis_Contig123.83.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig123.83.1 vs. uniprot
Match: D8LKQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKQ0_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 3.860e-99
Identity = 167/222 (75.23%), Postives = 179/222 (80.63%), Query Frame = 1
Query:  307 SAPLQADAFFVVPTPTRAVRVHGLATTKMTTTMAAKGFGKSVEPPPATPATTGAAGXXXXXXDTASGDGESGGVRSWEKEYKAYIKRTGQYLCSMSWEGHEEMGRGAIFANYDDAKKGEKLNETDKFGGIPSMYVPLTEFESMKAAGQEAGEGNDLAQIVRRVKDYRPEKEFVVVFQAAGIMGADIVRPNVSPPEMAKHVVKSDGVSTMPSASGLDGVIDVN 972
            SAP  A+AF + P      +    AT ++   MAAKGFGKSVEPP   PATTG           A G     GV SWEKEYKAYIKRTGQYLCSMSWEGH+EMGRGAIFANYDDA+K +KLNETDKFGGIPSMYVPLTEFESMKAAGQEAGE +DL QIVRRVKDYRPE+EFVVVFQAAG+MGADIVRPNVSPPEMAKHVVKSDGVSTMPS +GLDGVIDVN
Sbjct:   75 SAPFLAEAFLLPPARAGLAQRETAATARV---MAAKGFGKSVEPPSPAPATTGG----EEGGGKAPGSEGLSGVGSWEKEYKAYIKRTGQYLCSMSWEGHQEMGRGAIFANYDDARKEDKLNETDKFGGIPSMYVPLTEFESMKAAGQEAGEEDDLGQIVRRVKDYRPEREFVVVFQAAGVMGADIVRPNVSPPEMAKHVVKSDGVSTMPSDTGLDGVIDVN 289          
BLAST of mRNA_P-littoralis_Contig123.83.1 vs. uniprot
Match: A0A836CCX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCX0_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.530e-41
Identity = 76/150 (50.67%), Postives = 102/150 (68.00%), Query Frame = 1
Query:  535 WEKEYKAYIKRTGQYLCSMSWEGHEEMGRGAIFANYDDAKKGEKLNETD-KFGGIPSMYVPLTEFESMKAAGQEAGEGNDLAQIVRRVKDYRPEKEFVVVFQAAGIMGADIVRPNVSPPEMAKHVVKSDGVS----TMPSASGLDGVIDV 969
            WE+EYKA+I+R G Y+CS+SW+ +E+MGRGA+++NYD  K    L+E D K GGIPSM+ PL EFE+M       GE NDL QI++R+K Y P KEFVVVFQA G+ GADI  P++ PP++AK V  +  +     T   A G DG + +
Sbjct:   36 WEREYKAFIRRCGAYVCSLSWQAYEKMGRGAVYSNYDGGKAAGTLSEADEKLGGIPSMFCPLHEFEAMVPGAAAKGEHNDLDQIIQRIKQYDPTKEFVVVFQAGGVCGADICSPSIPPPDVAKQVEAAIDIEAAARTQRVAMGADGRLGI 185          
BLAST of mRNA_P-littoralis_Contig123.83.1 vs. uniprot
Match: W7TWP7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWP7_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.760e-34
Identity = 74/149 (49.66%), Postives = 97/149 (65.10%), Query Frame = 1
Query:  529 RSWEKEYKAYIKRTGQYLCSMSWEGHEEMGRGAIFANYDDA---KKGEKLNETDKFGGIPSMYVPLTEF-ESMKAA--GQEAGEGNDLAQIVRRVKDYRPEKEFVVVFQAAGIMGADIVRPNVSPPEMAKHVVKSDGVSTMPSASGLDG 957
            + WE EY AY+KR G +LC+MSW G++  GRGAI A Y+D    ++G  L+E D+  G+PSMYV L  + ES +AA  G    E  DL QI+ RV  Y PE+ FVVVFQA G+MGADIV PNVSPP+MA+ ++  +     P    +DG
Sbjct:   72 KRWEAEYLAYVKRNGAHLCAMSWRGYQAEGRGAILAKYEDKDMDQEGRTLSEIDRVSGVPSMYVSLARWMESGQAAKDGPAQAERQDLQQILDRVISYEPERAFVVVFQAHGLMGADIVTPNVSPPDMAEKLMAKES-DLAPQTIDVDG 219          
BLAST of mRNA_P-littoralis_Contig123.83.1 vs. uniprot
Match: A0A7S2WW30_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW30_9STRA)

HSP 1 Score: 126 bits (316), Expect = 2.120e-29
Identity = 72/162 (44.44%), Postives = 98/162 (60.49%), Query Frame = 1
Query:  511 GESGGVRSWEKEYKAYIKRTGQYLCSMSWEGHEEMGRGAIFANYDDAKKGEKLNETDKFGGIPSMYVPLTEFESMKAAGQ---EAGEGNDLAQIVRRVKDYRPEKEFVVVFQAAGIMGADIVRPNVSPPEMAKHVVKSDGVS-TMPSASG-----LDGVIDV 969
            G++     WEK+YK+ + R G+ L +MSW+G E+MGRG I ANYD+        E+DK+G IPSMYVP    E+   AGQ    AGE +   QI  R++ Y PE+EFVVVF A G+MG D+V P + PPE+ +      G + T P+A+G      + VIDV
Sbjct:   53 GDASVQERWEKQYKSMLARIGEDLTAMSWDGFEKMGRGVILANYDNVTA---ATESDKYGSIPSMYVP----EAQIKAGQINLAAGEESSFDQIASRLESYDPEREFVVVFHAEGLMGTDVVTPCIPPPEVCRSRRMLKGYTLTNPNANGGFAKNKEVVIDV 207          
BLAST of mRNA_P-littoralis_Contig123.83.1 vs. uniprot
Match: A0A7S3EJF2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJF2_9RHOD)

HSP 1 Score: 110 bits (276), Expect = 1.830e-24
Identity = 53/118 (44.92%), Postives = 81/118 (68.64%), Query Frame = 1
Query:  517 SGGVRSWEKEYKAYIKRTGQYLCSMSWEGHEEMGRGAIFANYDDAKKGEKL-NETDKFGGIPSMYVPLTEFESMKAAGQEAGEGNDLAQIVRRVKDYRPEKEFVVVFQAAGIMGADIV 867
            +G V  W+KEYKA++KR G+ +C+M ++G+  +GRGA+FANY +A   +K+ ++ D    +PSMYVP+ +    ++A +   +G D+  I  RV  Y PEK+FVVVF+  G+MGADIV
Sbjct:   56 AGQVGVWQKEYKAFLKRNGKDICAMCYDGYRRLGRGAVFANYSEAM--DKVESDIDLAQSVPSMYVPMDKLR--ESASRRPSQGGDMKHITDRVARYDPEKQFVVVFECNGVMGADIV 169          
BLAST of mRNA_P-littoralis_Contig123.83.1 vs. uniprot
Match: A0A0G4ERJ3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ERJ3_VITBC)

HSP 1 Score: 106 bits (265), Expect = 3.050e-22
Identity = 57/144 (39.58%), Postives = 87/144 (60.42%), Query Frame = 1
Query:  535 WEKEYKAYIKRTGQYLCSMSWEGHEEMGRGAIFANYDDAKKGE--------KLNETDKFGGIPSMYVPLTEFESMKAAGQEAGEGNDLAQIVRRVKDYRPEKEFVVVFQAAGIMGADIVRPNVSPPEMAKHVVKSDGVSTMPSA 942
            WEK Y+  ++ +G   C+ +W G+E+MGRGA+   ++  ++GE           +  K    P+MY P  +F S KA  +E  E + LAQ+ RR+  Y P KEFVVVFQ++G+MGADIV+PN++P E A+ + K +   T P +
Sbjct:   98 WEKSYQENVRASGFSWCAQAWMGYEKMGRGAVMVYHELKQEGEGEGGDGAATATKATKMDVAPTMYAPAEKF-SKKAGSRE--EESHLAQVRRRLDSYDPHKEFVVVFQSSGLMGADIVKPNMAPAEAAR-IYKEENNLTQPDS 237          
BLAST of mRNA_P-littoralis_Contig123.83.1 vs. uniprot
Match: A0A7S2ZY89_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZY89_9RHOD)

HSP 1 Score: 75.1 bits (183), Expect = 4.550e-12
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 1
Query:  619 RGAIFANYDDAKKGEKL-NETDKFGGIPSMYVPLTEFESMKAAGQEAGEGNDLAQIVRRVKDYRPEKEFVVVFQAAGIMGADIVRP 873
            RGA+FANY +A   +K+ ++ D    +PSMYVP+ +    ++A +   +G D+  I  RV  Y PEK+FVVVF+  G+MGADIV P
Sbjct:    1 RGAVFANYSEAM--DKVESDIDLAQSVPSMYVPMDKLR--ESASRRPSQGGDMKHITDRVARYDPEKQFVVVFECNGVMGADIVTP 82          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig123.83.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LKQ0_ECTSI3.860e-9975.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CCX0_9STRA1.530e-4150.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TWP7_9STRA2.760e-3449.66Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2WW30_9STRA2.120e-2944.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3EJF2_9RHOD1.830e-2444.92Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A0G4ERJ3_VITBC3.050e-2239.58Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S2ZY89_9RHOD4.550e-1245.35Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig123contigP-littoralis_Contig123:411401..421120 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LKQ0
Model size2236
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.99e-105
EggNOG OGs2F0BR@1|root,2T1HY@2759|Eukaryota
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-07_004350.1
Cds size915
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig123.83.1prot_P-littoralis_Contig123.83.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig123 412699..421060 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789536.151905-UTR-P-littoralis_Contig123:411400..4116321680789536.151905-UTR-P-littoralis_Contig123:411400..411632Pylaiella littoralis U1_48UTRP-littoralis_Contig123 411401..411632 -
1680789536.162518-UTR-P-littoralis_Contig123:411669..4126981680789536.162518-UTR-P-littoralis_Contig123:411669..412698Pylaiella littoralis U1_48UTRP-littoralis_Contig123 411670..412698 -
1680789536.24688-UTR-P-littoralis_Contig123:421060..4211201680789536.24688-UTR-P-littoralis_Contig123:421060..421120Pylaiella littoralis U1_48UTRP-littoralis_Contig123 421061..421120 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789536.1762793-CDS-P-littoralis_Contig123:412698..4128191680789536.1762793-CDS-P-littoralis_Contig123:412698..412819Pylaiella littoralis U1_48CDSP-littoralis_Contig123 412699..412819 -
1680789536.197549-CDS-P-littoralis_Contig123:413335..4135141680789536.197549-CDS-P-littoralis_Contig123:413335..413514Pylaiella littoralis U1_48CDSP-littoralis_Contig123 413336..413514 -
1680789536.2083223-CDS-P-littoralis_Contig123:413831..4139541680789536.2083223-CDS-P-littoralis_Contig123:413831..413954Pylaiella littoralis U1_48CDSP-littoralis_Contig123 413832..413954 -
1680789536.2169724-CDS-P-littoralis_Contig123:414765..4149431680789536.2169724-CDS-P-littoralis_Contig123:414765..414943Pylaiella littoralis U1_48CDSP-littoralis_Contig123 414766..414943 -
1680789536.228772-CDS-P-littoralis_Contig123:415357..4156651680789536.228772-CDS-P-littoralis_Contig123:415357..415665Pylaiella littoralis U1_48CDSP-littoralis_Contig123 415358..415665 -
1680789536.2371662-CDS-P-littoralis_Contig123:421054..4210601680789536.2371662-CDS-P-littoralis_Contig123:421054..421060Pylaiella littoralis U1_48CDSP-littoralis_Contig123 421055..421060 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig123.83.1

>prot_P-littoralis_Contig123.83.1 ID=prot_P-littoralis_Contig123.83.1|Name=mRNA_P-littoralis_Contig123.83.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=305bp
MEAPLRQPRAANTNEAHRPRRRSSLLSSGRRSEGFVPRDNLTPPSPSPAA
AAAAARRYTASSRLTKTSTTIVAAMVAACCCSSAPLQADAFFVVPTPTRA
VRVHGLATTKMTTTMAAKGFGKSVEPPPATPATTGAAGGGLGGGDTASGD
GESGGVRSWEKEYKAYIKRTGQYLCSMSWEGHEEMGRGAIFANYDDAKKG
EKLNETDKFGGIPSMYVPLTEFESMKAAGQEAGEGNDLAQIVRRVKDYRP
EKEFVVVFQAAGIMGADIVRPNVSPPEMAKHVVKSDGVSTMPSASGLDGV
IDVN*
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mRNA from alignment at P-littoralis_Contig123:411401..421120-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig123.83.1 ID=mRNA_P-littoralis_Contig123.83.1|Name=mRNA_P-littoralis_Contig123.83.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9720bp|location=Sequence derived from alignment at P-littoralis_Contig123:411401..421120- (Pylaiella littoralis U1_48)
GCAGGCCAGGCGCAGATCAGACCAGAACAGGACAGGGGGCCAGAGGACAG CCGAAGGACAATGGAGGTTGGTGTGTGAGCCTCGTAGTTTTTTCAACTGT ACTTGCGTCAACGTTGTGTCACCCTTGGATCGAGCAGCAGCACTGCTGCT GTACAGCAATCAATCCCCCAAGGATTCTTGACTTAGGTGTGCAGTACTAC ATGTCATTCTGCGTGACCTGCATCGATCATGCACAGCAGTACACGTGCGG TCGTGTGACCAACACAAAAAATGGGGTTGGGTGTGGGATACCCCGTTTCA CGCGGTTCTTTGTGCTGCCTGTGCGCTCTGTAGTTCTTGATTTAGGGGTC TTGTGTGGTTATTTTCAGTCGTTGCCGAACACTCTCCACTGCTGTAGTAG TATTTACCACTTACAATGCACTTTTACCCACTTCGAAGTAATCCAGTATG CATACAGTATGATACAGGAGTTAGCAGCAGGAGGGCCGAATTGGGTTTTG CTCTGGATTGGGCTGGGTTGGATTGGGTTGGGTTAGGTATGGTAAGGTGG GTTCCTTCAGTTCGGTTCGAATTGTCCTGGGCTGGGACTGTCTTTGCACC AGTTCTTTTTCCTCTCATCATATCTTTCAGCTCCGAGCGTAGCGAGTCAC CACCAAACACACCGTCCTTATTAAGAGCCCCACCCAGCCGCCAACACACC GTCACATTCAGCAGTTCCTCTACCTCCAATCTACGAGAGAACTAGCCACC AAGAGACTGTTGTGACACAGCAGTCCGGAATCTCCGTTAGCTTTCTTAAG CATAGCGAGCAACCAACACCCTGTGTGGCACACCAGGCCTGCGTATGTTT CCTCCCCTTGGCAGATTTCCCCTGCAAGCTATATCCTGCCAACGCCTACT CCCTTCAATGATTGCAAAATGGGGGGGGGGGCTCCAGCATCTTTACCCAA AGATACATCACGTCTTTGTGCCCTGGGCCCCTGTCAGTCCTTCCCCTATT TATTCACGCTGCGGCGTGGAATCCCATAATTTTTAACGGACTTCCCTGCG CTCCTCGCACTCCTTCACTTCGCCATCTCGAGAACTGACTGCTACTACGT TGGTGCCTTATCTTCTCGCGTGCTACAGTAGCGGCTACGGTTTAACGGAA AATGTTTAAGAGAAAGTACCGATTTAAGAGAGTAAAACGGCTTGGCACGC CCAAAATCGATTTAAGAGAAAATGTAGCATATTTCTGAGATTTTCTCTTA AATCGAGCTTCTGGAGGCCACGTCACATAGCCATCAACACAAAGACCACA CACACAGCAGCTGCCGACACCATGCCCTGCGCAGCGGGTAGTCGCTGTAA CGTCCCCGATCACACGCCAGGCCCGCCGCAGTTCACAAATCACCAATGCA GAGGTGTCTGCGGGCAGTACCTCCATGGCAACTGTGGTTTGCCGGACCCG CGCGGCACCAGCGAGATGCAGCAGAGGCTGTATTAAGGTCGACAGGCGGA GAGGGTTGCATTGATTTTCTTCGCTTACGTTGCTTTGCAGCGCGTGCGAT ATACATAAGAAGCGCTTGTTACTTCGTGGGTTCATATGTTGGTGGGATGA TGTAGGGTTGTGGGTGTTGGGCGTTGGGTGCAAGGGATGGGAGGGGTATT CAGTGGGTGAGAGGGTGTTTTTTTCTAGCAGCCTGGTGCATCCTTGGTCC CGTGTTGCAGTTCTCTAGAAGAGGTGCGAGTATGCGGCAAACCTATCACT GACAAAACGAAATATGTATAGATATGTGTACAGTATCCACGCGCACTAGT GTGTCGCACTACAAAGGTACAGCAGTGTACCACGTACTTCGGTCTTGAAG TGCTCGCCATCCGACAGATGAAGCGGCGTGTGGAGCGAACCGAAGGTGCT CTGACGCTAGCTGCGCAATGTAACATTAATGATACGCTCTCTTCATGACC ATTTTAGGCATTACTAGTCTAGCTGGGACGTGAGAGTCCCTGTTTCACGA CCTTCAGGTTTGGCTACGGTATAAGAGAATATTCTCTTAAAGTGAGCTAC CGTTTAAGAGAATACTCTGTTATACCGTAGCCAAAACGATATAACAGAAA GCACGATTTAAGAGAATAACACTGGGTTGTCCCGACCCTCTCTTAAACCG TAGCCGCTACTGTACCGACTTGTTGGCCTCTGTCGGCCTCTCTGTCCGTC CTTGTTCCAAAACAGCGAGGAATCACTGCCGTTAGCTCTGTTCCTCCAGG GCTGACTCCTCGCACGCTCCCTGACAAAATCTTGCAAATATCACACCTGC TCTGGCCAAAGTATCCGTTGCGCTTCTGCTGGACGCCTCATGCTTTATGG TGTGCTGTGTTGCACAGACAGGTCGCATCATTCCCTCTTATGTCGGTCGT CGTTGACTACTGCTGCTACTACCGCTGTGCTGCTCGTTCCCCAACTTGAA CCATGCCTCCTTGAAACACAACCGTAACATCATGTAAATACCCTGGTACT TGAGTTTTAACCGTCCTCACCTCACGCTGTTAGGCATGAGTCCATCTGCA GACGTACAGTGCACACACCCCGTGGCAGTGGTAAAACCTCCTACTGCTTG CTTCTTCCCCCCAATCGGACAACCGAGTGCCCAAGACGAGTACAAGATAG ATGCTTTATCGCCTCTTCATCTCTTCTCTCACACGTATCACAACGAACCG AACGTGTTCCATGCGCGTCATTTATAAACGTCCTCAACCCAGTTATGCAC AGCAGCCTGTGTATATAACGGGGCTCAGTGAATATATCCTACTGCACGCT ATTCCCCCCCACTCGTACAGCCGTGCCTGGGAGATCCTTCATACAGGTAT CTTCCCTCTGTGACATCCCAGACACGCCACAGGCGCCGAAAGTGGTATCG TAAATGATTCATGCACGGTCCTGACCTCACACTCTGTCATACAGCAGCAG CCCACCTGTACCGCGCGTGTACTGCGTTCAGCATACACATCCTACCGCAC GCCTCTGGCCTCTGTCCGTTCAGCAATGCCTCTAACCGAGGTTACCTATG TTCTTCTAACATATACAAGTGACTCTGACCCCAAGCAACCCCACCCAACA CACCATACAACAGCTGCACTTCTCAACAAACCTCTGACCCGAATCCCCAA CATTATCTACAAGCTCCGCGAGTCATCAGCACTCTTCTTCGTGTATATTC ATTGCTGTGATACACCAATCCATCTACTGTGTTCTTCATGTTTACAAGGT ATTGGGCGGCTTTCGCCGCCCCGATCAATGGATCGATACGCGTTCCTTTC TTTGTCAGCGTGCAGTCAGTGCAGCTACTACCTTGTACGCGCCGTATGGG ATGATGTGTGAACGATAACTTAAGCTGCCACTGGTGTGTGTAAGATTGCA GATGACTTGAGGTGTGTGTCTACGTGTGTGAAACACCATGTTTACGGAAC GTGCCAACAGCGACCGACCGCGCACCTGGACCGCCGTTCTCCGCTCATTT GTACCCCCGGTCAACAAACGGATTGGGCGCAAAGTCAGCTGCTTTGCCGG GCGATTTCCTAGGCATAACATTTCTCTCTCTGGGTTTGCCATTTTCTGAG AAGGAAAAATTGGTTTACGACGGCCCACGTAGTGCTGAAAAGACGTGCTT CATGGTAATTTTGCCCTCCCCTGCTCCCGTCGGAATAAAGCGGCATTTGT GCAAAAATCCCTGACTCTTGTGTTCCAAGTTGTTCTCACGAAACGCTGTT CCTTGACAAAAAAAAAATTGTGCCGAGCCCAGCGTAGCTCCAAAACGTTG GTCTGAACCCAATTACGGGCGACCGCACAACGCTCCTGTGTCAATTTAGG GTTCAGTCTCGAATGCCCCCGTCCAAACCCCGGGATCTACATTATTTCAT ACCTCGCGTTTTTATTATTGTGTGAATTGCTCGAATAGTTACGCCTCGTG ACGGCCCTCGCATTTATTTCTGCACGGTGGAAAGGAACCTTCGGTACCTC CGAAGCCAAGCAAGCTGTTGATGGTAGTGGAAGTATACCAGAAACGTAAG CAGGCAGTGTTTTTGCTTTGCTCTACACCACCACAACAAAAGCACGTGCT TTGTCGATGACATGTCTTGAATGTCCAGGAGGACGGGCGGGAAAAAGAAA GCCGTCCTCTATCTGTGGAGCAGCCTGGCTCTGACTTCTTCTCCTTCCTT CCCACCGTCCCTTTCATCCCGTTCTTCCTTGCCTGCTCCTTTTTGGTCAT ATACGAAGTACAGCAGTACACACGATGTGTTACCTTTCCCCCAATTTGTT TTCGCGGCCCCGGTCTCGCGATTGAAGCTATTCGCATTGCGCCATCTTCC CTTTTATGTCTCCCCCTATTCCCACTCTACTGTTCTTTCTTCACGTGAGG CCACAACATCTGTATTACGCTGAGCGTTAAATCCTCCACATCTATCAGCC GTCTCGCCCTTTGGTAACGTCTGTTTCGTTTCTCATGTTGCCTCTCGCTT GTCTGTATCCCATCATTGGATGTGTCTGAAGCGAACTGTCCCAGGCGACA GCTACTCCCAAACCTCCACACACATGTATGCACTCACACATACGCACAAG TACACTCAAACGCACGCACATGTGTGATACACACGCGCGCACACATTCAC AACACGTGCGCGAGCAGAAATTCCGTTGACTGCTGATAACCACGAAATAT ATCACTTCGAACTATACAGTACCGGGTCTACTAGCCTCTCAGCCCTAGAA GCCGTTCATTCCCCTCTCACCGCCGTCGTGCGCAGGACCCGCTCTCTTGT CTGCTCTGTAGCAAAAACATTCCAGCATCTGTTTCGCACCGGCGTATCAG GCTGTTGCTGGCATTGAAGCGTGGCACAGATTCATGAATTGTGGCATGGT ATGATATGTTTGTTACATTGCAAGGAAACATATGGGTCGTAGACTCGTTG GTTCACAATCAAGAGAACCTCAGGATAACATGCAACATGGACTTCGAGTA CTTTTGTGTAGTTGGAATTGGTAGCGGGGGACACCTAAGGTGCTGTTCCA ATCTTCAATTTATGTCAAGATAACATAGCTCCCAACACATTTGATTGCAT TGCTCGCTTAGTTGAGACAACATTTGTCGCGGGGAAGTGTGATATGTATG ACAACCCTTTTGCAGCAACTCGCTGGGATGGACGGGATACACACGACGCT GTGTCACACGTGACAGCTTGCACAGACGGTCGACGAACGCCGACTTCATC CCATCCTTCACCGTAAGCATGGGGTGGTTTACCTCTGCCATTGCAGATGC TCTACGCGCTGACTTGACTCTTTCCTTTTTTTACTCTCTCGGTTTGCCTC TGCCAGTGCAGATACTCTACGCGCTGACTGACTCTTTCATTTTTTTTTGT ACTACTCTCTCTCCCTCTTTATTTCTCTCTCTCGGCCCTCGCTTTGCGAA TACAGGCACCACTTCGACAACCCCGGGCAGCCAATACCAACGAAGCCCAC CGCCCCAGGAGAAGGAGCAGTCTCCTCAGCAGCGGCAGAAGGAGCGAAGG TTTTGTGCCGCGTGATAATCTTACACCACCATCGCCATCACCAGCAGCAG CAGCAGCAGCAGCAAGGAGGTACACAGCGTCATCGCGCCTGACGAAAACG TCCACTACCATCGTCGCCGCGATGGTAGCGGCTTGTTGCTGCTCGAGCGC TCCCCTCCAGGCCGACGCATTCTTTGTCGTTCCCACTCCAACAAGAGCAG TGCGGGTCCACGGGTGAGAAACACCATTCGCTTTGTTCTTCCTAAAATAC TGTAGCAAAGAACGTCACGTAGCGAGACCCTCATTATTGTTTGTCCCGTT CGTCAATAATTGGTTGCTGTGCACGACACGAAGAGTGTTTGACTAGGTTC ATTCAGAATGGCTCCTCCTCATGTTGCACTTCACGCCGCCACGACCATGC GACACAGGCAGTCTCACCGCCATTGCGCAAAAACTGTTTTCTCAGTCTCA GTTTTTTTGTTTTTTTGTGGTGATTTTTTTCGTGGGCCTTTCTCCTGTTG TATCATACCATGGTATGTATGTACACCGCCGTGGCACCAATACCACCAAC ACGGCTTCCTGCCGCCTGCCAGGTATTGCGCTTTCAAAACCACCCGCTGA CTCGATCTCATGCCGTCGCGTCCCTAGATTAGCGACGACGAAGATGACCA CGACGATGGCAGCCAAGGGCTTCGGCAAGAGCGTCGAGCCCCCTCCTGCC ACTCCAGCGACCACAGGAGCGGCGGGGGGAGGACTAGGAGGCGGTGACAC GGCCTCCGGCGATGGAGAGAGCGGCGGGGTGAGGTCGTGGGAGAAAGAAT ACAAGGTGAGTTGTGGCTGGCGAGAGACGATGGTGGGTTCGTGGGTGCGG GTGGGGAGTTGGGGGGGCAATATTACGAGATGTTTAGATTTTGTCATTTT TCGTGGCCACCCAGTCTTGTGAACTGCCTGCGATACCGCTCACGAGGCTT TAACGGGGAAAGATGTCCTTCGCAGTGCGGGTACGTGTCAGATTATCATA TTGCTCTCACTGCTTGCGCCGAGCCGAGGGATTCCGCCTCCGTCGCAAGC GATCTCAACCGCAGTCTGTGGAAGGCCACTTAGCGATACTCGGGGAAAGG GGGACACACAAACAGGCCCGTATCGCACCGCAAAGTAAAAATATCCCACG GGGAAAATAAAAAAAAACAAAAAAACGAGGAAAACGCGTTTTGCATGTCG GCGCCGACCCTCGGAGCCGTTCGTCAGTTACTCGTGGATATTTATTGAAA GAACAGGAGCACGCTCGTCATCACATCATTTGCGTTTGCGTCTGTCTTCC ATGTGCACGCGCGGGGCCATCCCCTCGATCCGCACGTATGTGTCGAAAGC CGTGTTGAAGTCTAATTATTTCACCCATTTTGCTCTATGGTGTTTGGGTT CTTGTGTTGAGGTCACGAAACCGCTTTTGACAAAACGACACGGAGTATAT TTTAGGTTTCTTCGGAATCTGACGGGGCGCAATCGTATCGAGTTCGCGTG TACATGTGGGAAGTCAAATCGAATATATATTGTACTTTGAGTGAACTCTT CTATGAAATCTTCTATGATAATGGGGTCCTTGACCCACAACAAACCTCCC GACAATCCGCGCACAGGCATATATCAAACGAACCGGACAATATCTGTGCA GCATGAGCTGGGAGGGCCACGAGGAGATGGGCAGGGGTGCGATATTTGCC AACTACGATGACGCTAAGAAGGGGGAGAAGCTCAACGAGGTCAGCTACAT TGTTGTACACAAACAGTTCGGAATTTTTTCCCGGCACTTTCCCGCCTGTT GCTGTTGGCGAGTCACGGTAGGGAATTCAAGACAAATTCATGGATTGCCT CCATATACTTCGTACTTAACGTTATGTCAGCCGGGGTGAAAGGAGACACT ACTCTTTGACTTGCTTTTTACCACACTTTTTCCTCCTAGTTCCCGTTGCA TGAAAGAGTCGAAAATTATTGAACGTACGTTCGTCCGTGCGCAAACGACG GACGCTCCGCCGTGCGTGCCGCCGTTCCGTGAACCTTGACAACAATTAAC GATAAGACGGACAAGTTCGGCGGCATCCCATCAATGTACGTACCCCTGAC GGAGTTCGAGAGCATGAAGGCGGCGGGACAGGAGGCGGGGGAAGGGAACG ACCTGGCCCAAATCGTGCGGCGAGTCAAGGATTACCGCCCCGAGAAGGAG TTCGTTGTGGTGTTCCAGGCCGCAGGGATCATGGGGTGAGTGATTTGCCT GTTCGTCGTTGATGAGATATGATCCCACGTCTTCCAAGTTTCAAGACAAA CAGCCTATATTGCTTAAGGAGTGCTTCGTAGTACGTTACTACTCTTTCTC TGTTTACGAAGTGTTTGATCTGTTTCTGTTTCGATGTACGTGGTATGGTT GTGATCCGGCTGTGATTCGTCAAGGCCGACGCTTTGTCACATTTCGCATG GTGTCACATGACTGTCGGAATGCCGACAGCTGTGGTGCTCGATGGCCTAC GATGCACATCTAGGGGCGCGGGCCGACAAAAGCTCCCCCCCCGCCACCGC CACCCGAACGTTTCAGGTGTTGCCGTTTCTAACTTGTGGCACGCCCTTAC TTGACGATTGCATTAGCACAAGCACTCCCTTTCCTAATTTCTTGCTATCC CCGACCCTCTCCCACACCCTCTTGCTTCTACCACATGGTTACATAATGGC CTGCTTCGTGCCGCCCCTCCTTGCTGCTTGTTCGGCTGCTTGATGCTGCA GAGCTGACATTGTACGGCCGAACGTCTCGCCCCCGGAGATGGCGAAGCAT GTGGTGAAATCCGACGGAGTGTCCACCATGCCGAGCGCTTCAGGGCTGGA CGGCGTGATCGATGTCAACTAGAAATAGTGATGGACGGAACGTCAACTAA CTCGGAATTGCGTTGGCGGCAAGCTTGCAACTGCCACAGAGCTTGTCAGC ACGTCGGTCTTTCTCGAGGCGGGTGGTTCTTCTATGAACCAGACAAGAGC GGTCTCAAGACCTTGCCTTGCTTTTGAAGAAAAAGCTTGTTTGACGGCGT CACCAACGTCACCTGAAGAGGAAAGTAATCCATTTGTACCCACCGTGAAT GAATGTGTAGAGCGTGCGGTTGTATCTCGGCTGCTGTTGATTTTCGCTGA AATGGGGCTGTCAATTATCACAAAAAAGTGCCAGTGTCTTCGTCGTTTCG TTGTGTGCCGGAGGCATGAACAGCGACTATGCTCTAGGTGGGCTGTGTTG TACCTACCGCATGTGCCTTGGCCGCAGCTTAGATCCTCGTTTAGGGAGAG ACGAATACATAACTGTCCTTGTGTGCGGGTGTTACCATTCCATCTAAGCT GGACGCCAGTTTGCACCTTTCGGCATAAGTTTGGCACACTGGCCGCCATC ACTTGATTTATTTTTTTGTAGAAAAATACATCGCTCTACCCTCAACATCT TGGAGACTGCACTAACGACATGCGGATGAATTGTACAACAGGTATATTTT GCACGAAAATATTTTTTAAATACTGTTCTTTCCTGTCTTGGATTCTCCCG AGAGGCCCCGTAAGCTTACCGAAATGAAACGTCAACGACTCAAACGTTAT TTGTCCTTCATGCTTGGGCTATGCACACCTCATGTGTGTTATCAATTTCC GTTGTAGAATTGTCTGTCCTGAAAAAATCATAGTTGCACGACGTTTGTTT ACTTCCACTGCTGCTGCACCACAATATATTTTTGTCTTGTGGAGCCTGGT TTGTTCCGCAAAACATCATTTGTTGATGGGTTTCAGAAACAGTAGGTTGG GAGTTTTTTGTTGTCGTGTTCGATTCAACAAAATTGGCTGGATCCTCGAC CAGCGAGAGGCGAAACGCGTTCATGATGAACGTGGTACTTGTACTCTTCT AGTGGGCAAGAACAAAAAATATTTGTTATTTTTTTCAAATGTTTTTGTTT ATTTGTGTTCGTTGCAATATCTACTCTAGATCCTCGTCTAGATTGTTGTG TAGAATAAAAGAAAAAATGCTGTCGCGTAAAGAAAGAGTTTCTTCTGTTC CGTCTTTCCTTTTGTTTCCTTGGGTCCATGGTGTTTGGCTGTCATCACAA GTCATCGATGTTGGACGAGACAAAGGTCGGACAATATTTAGAGCGAAGCA ATCCAAAGAGGAGGAGGGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig123:411401..421120-

>mRNA_P-littoralis_Contig123.83.1 ID=mRNA_P-littoralis_Contig123.83.1|Name=mRNA_P-littoralis_Contig123.83.1|organism=Pylaiella littoralis U1_48|type=CDS|length=915bp|location=Sequence derived from alignment at P-littoralis_Contig123:411401..421120- (Pylaiella littoralis U1_48)
ATGGAGGCACCACTTCGACAACCCCGGGCAGCCAATACCAACGAAGCCCA
CCGCCCCAGGAGAAGGAGCAGTCTCCTCAGCAGCGGCAGAAGGAGCGAAG
GTTTTGTGCCGCGTGATAATCTTACACCACCATCGCCATCACCAGCAGCA
GCAGCAGCAGCAGCAAGGAGGTACACAGCGTCATCGCGCCTGACGAAAAC
GTCCACTACCATCGTCGCCGCGATGGTAGCGGCTTGTTGCTGCTCGAGCG
CTCCCCTCCAGGCCGACGCATTCTTTGTCGTTCCCACTCCAACAAGAGCA
GTGCGGGTCCACGGATTAGCGACGACGAAGATGACCACGACGATGGCAGC
CAAGGGCTTCGGCAAGAGCGTCGAGCCCCCTCCTGCCACTCCAGCGACCA
CAGGAGCGGCGGGGGGAGGACTAGGAGGCGGTGACACGGCCTCCGGCGAT
GGAGAGAGCGGCGGGGTGAGGTCGTGGGAGAAAGAATACAAGGCATATAT
CAAACGAACCGGACAATATCTGTGCAGCATGAGCTGGGAGGGCCACGAGG
AGATGGGCAGGGGTGCGATATTTGCCAACTACGATGACGCTAAGAAGGGG
GAGAAGCTCAACGAGACGGACAAGTTCGGCGGCATCCCATCAATGTACGT
ACCCCTGACGGAGTTCGAGAGCATGAAGGCGGCGGGACAGGAGGCGGGGG
AAGGGAACGACCTGGCCCAAATCGTGCGGCGAGTCAAGGATTACCGCCCC
GAGAAGGAGTTCGTTGTGGTGTTCCAGGCCGCAGGGATCATGGGAGCTGA
CATTGTACGGCCGAACGTCTCGCCCCCGGAGATGGCGAAGCATGTGGTGA
AATCCGACGGAGTGTCCACCATGCCGAGCGCTTCAGGGCTGGACGGCGTG
ATCGATGTCAACTAG
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