mRNA_P-littoralis_Contig123.73.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig123.73.2
Unique NamemRNA_P-littoralis_Contig123.73.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig123.73.2 vs. uniprot
Match: A0A6H5L9N5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9N5_9PHAE)

HSP 1 Score: 432 bits (1110), Expect = 4.700e-144
Identity = 231/295 (78.31%), Postives = 255/295 (86.44%), Query Frame = 2
Query:  155 MAAAAGEDYD-----SDISGSGTEKDLSKSKSSTKQ-----------AVDRSQALVKWAGGEAAATGVSAAMVAVGMSTVVIPAVAVIVLVGHVVVRGSIRAVKKKLKVRAEQKAHLEQLNLTETSVRSATGHFTVVLNGLGPNGEFNAYVSPNDNASYAPVSPGHLKGISKLISGATNCNVRDMGGFTEEASTPFTVRISMPDVLALMRQSWVYERFCQTKCRSMTVVVLRSQHSRGKDKLRVAWENSGTLDYTKAQVYTERDWKKTKYAGKTKTMPEGIADVDMALEKTLVFD 991
            MA+ +GE  +     SDI+GS  +   S SK                AVDRSQA+VKWAGGEAA+TGVSAAMVA G++T+V P VAVIVLVGHV+VRGSIRAVKKKLKVRAEQKAHLEQLNLTET+ RS++GHFTVVLNG+GPNGEFN+YVSPND+ASY  VSPGHLKGISKLISGATNCNVRDMGG+TE A+ PF VRISMPDVLALMRQSWVYERFCQTKC +MTVVVLRSQHSRGKDKLRVAWENSG+LDYTKAQVYTER+WKKTK+AGKTKTMPEGIADVDMAL+KTLVFD
Sbjct:    1 MASTSGEAEEYAYESSDITGSDEDLPSSNSKKGKDXXXXXXXXXXXXAVDRSQAIVKWAGGEAASTGVSAAMVAAGITTLVAPTVAVIVLVGHVIVRGSIRAVKKKLKVRAEQKAHLEQLNLTETTARSSSGHFTVVLNGVGPNGEFNSYVSPNDDASYRAVSPGHLKGISKLISGATNCNVRDMGGYTEGAAVPFCVRISMPDVLALMRQSWVYERFCQTKCGTMTVVVLRSQHSRGKDKLRVAWENSGSLDYTKAQVYTEREWKKTKFAGKTKTMPEGIADVDMALDKTLVFD 295          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig123.73.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L9N5_9PHAE4.700e-14478.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig123contigP-littoralis_Contig123:363454..373326 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2167
Hectar predicted targeting categoryother localisation
Exons5
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-07_004630.1
Cds size840
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig123.73.2prot_P-littoralis_Contig123.73.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig123 364627..373172 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789535.8534656-UTR-P-littoralis_Contig123:363453..3646261680789535.8534656-UTR-P-littoralis_Contig123:363453..364626Pylaiella littoralis U1_48UTRP-littoralis_Contig123 363454..364626 -
1680789535.9223928-UTR-P-littoralis_Contig123:373172..3733261680789535.9223928-UTR-P-littoralis_Contig123:373172..373326Pylaiella littoralis U1_48UTRP-littoralis_Contig123 373173..373326 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789535.8680277-CDS-P-littoralis_Contig123:364626..3647401680789535.8680277-CDS-P-littoralis_Contig123:364626..364740Pylaiella littoralis U1_48CDSP-littoralis_Contig123 364627..364740 -
1680789535.8788505-CDS-P-littoralis_Contig123:365144..3655131680789535.8788505-CDS-P-littoralis_Contig123:365144..365513Pylaiella littoralis U1_48CDSP-littoralis_Contig123 365145..365513 -
1680789535.8917658-CDS-P-littoralis_Contig123:366223..3663701680789535.8917658-CDS-P-littoralis_Contig123:366223..366370Pylaiella littoralis U1_48CDSP-littoralis_Contig123 366224..366370 -
1680789535.9016132-CDS-P-littoralis_Contig123:366607..3667681680789535.9016132-CDS-P-littoralis_Contig123:366607..366768Pylaiella littoralis U1_48CDSP-littoralis_Contig123 366608..366768 -
1680789535.9123325-CDS-P-littoralis_Contig123:373123..3731721680789535.9123325-CDS-P-littoralis_Contig123:373123..373172Pylaiella littoralis U1_48CDSP-littoralis_Contig123 373124..373172 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig123.73.2

>prot_P-littoralis_Contig123.73.2 ID=prot_P-littoralis_Contig123.73.2|Name=mRNA_P-littoralis_Contig123.73.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=280bp
MAAAAGEDYDSDISGSGTEKDLSKSKSSTKQAVDRSQALVKWAGGEAAAT
GVSAAMVAVGMSTVVIPAVAVIVLVGHVVVRGSIRAVKKKLKVRAEQKAH
LEQLNLTETSVRSATGHFTVVLNGLGPNGEFNAYVSPNDNASYAPVSPGH
LKGISKLISGATNCNVRDMGGFTEEASTPFTVRISMPDVLALMRQSWVYE
RFCQTKCRSMTVVVLRSQHSRGKDKLRVAWENSGTLDYTKAQVYTERDWK
KTKYAGKTKTMPEGIADVDMALEKTLVFD*
back to top

mRNA from alignment at P-littoralis_Contig123:363454..373326-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig123.73.2 ID=mRNA_P-littoralis_Contig123.73.2|Name=mRNA_P-littoralis_Contig123.73.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9873bp|location=Sequence derived from alignment at P-littoralis_Contig123:363454..373326- (Pylaiella littoralis U1_48)
GTACCAATTATTATTCCCGTCGTGGCATTGCTGTACCTGTACGATATACC GGGGGATATACCATCCCTCCTGGTGCCAAACCGAACGCATTGCTATAGAG TAGCGTCTGCAGCAGTAGTAGTAGCCTCGTAAGGGACTCAATTAATTAAG GATCATGGCAGCAGCGGCTGGAGAAGACTACGACTCCGATATCTCAGGCT CAGGTGAGCGTGGGGTCCTGCAAGTATCTCTCACGACTCTCGAAAGCGAA ATTGATAAGACTGCTATAGAAACGTTTTTTGAAAGAAGGACGTGGATTAT CCTGTTGAGATGCGTCGCAACTTTGCCAGCCCTGCGGCGACAGACGATAG AAGGCATAGAAGTCGTTATTTACCAATCAGTGCAGATCTTCGGTAATCCC TTGTCCTTGAAAGTGCCTCGTCTTTGTTCATCTGATCCACCTCGTCCAGT CTCAGAATGGTCCCTGGTCTTCATCACGGGACTGTCATGTTGAGGTAGTT TCTCGCAAACTGCTGCCGTCTTCATCAGTAGTCGGGACGAAGTTTGCACT ACGGCAGTACCGCAGTACAAACATCGTCACGTTTGGTCCGGCTGTGTCAT CACCGTGGCAGCGTGTCCGTTTTGTAGTTCCATTCGTGTGGAAAAGTTCG GGAATTTTATGTCGCGCAAAAAGAAAATTACGAATCGCGCACCCTGCGGC AGAACAGCAGACACCTTCCATGTTCAGCAGACTGCAGCGGCAAGTACGAG TCCTTGTTCTGCCTTTACTAAACTCTTTGTGAAGTACGCACAGCAGTGGG TCAAAAGGTGCAGTTGTTAGCTCGAGTCCCGATGTTTTGGCGGCCTTGTT ACCGAGGATGGCGAGCTCGCACACGAGGTTAACCGCGGATCAAGGTCCGA CTGCTGAACATGGAGGAGGTGGAGGCTCTGCTACCTGTATCGTAGGTTCC AAGTACTTCATACGACCTGGGCACCACGCTGCAACCTACACGGGGTATTG CCAACAACACACCACCGGCTCTACGTACGGGCCATCCGATACATACCGCC GCTCATGAGGCATCTACGGACCGCTACAATTGTATGCCAAAGCGAATTGG AAGAAAGTTAAGTCAAAGGCGACTTACTTCTATTCGCGGGAGCTTTGGCC AAACCACATGACGGCCACATCCGAAGCGGCCGAAGTTAGGAAAACTCGTG TAGGGCGAGGATCCAGGCCAAGGCCCTCCGAGGCAACACTCTCTGGCAAA ATTCGTTGGAGGACGAATTCATTTTTAAGAGACACGGATGGTTCTCGACA GACAGTAGCCGGTTGTAACGTTTGGAATCGGCACCACCCTGTGAACGGAG GCCGCCAGTGGCGTGGGGTACACGAGGTGGTGGTGAAGGTGGCCGCAAAA CGTACGACCACTGGCACAAGTATGAGAAGTGTGTGTGTTTCATCGCATCT GTTCTCCCATCCTTTTCTTTTTGCTGCGTCCTAATCACTGCGTGTTCGTC CCGCGATTCGAAGTACATTTTTTATCTTCCAACTGCACCTTTTGTCTGTC GCGTTCAGCTGCTGTGTGCCTCTGGGGACGCACGCCAGCTCACACTTTCT ACAGGCGATTCTTTACGTATAGCGCTTTCGCAGATCTCCTCTGCGCATTT CGTGACATTTCGTGACATGCCCAGCGTAGACTGCCGCACTAGGCAGGTAC TCGTGTAGTCCCGGCACAGGAAGCCTCCTGAGGCACCTGCGGAGACTCAA ACCCACGCCCAGCCTCCTCCGCCGTACCGAGATGGAGGTAATCGTGCAGT GGAGGAGCGTGGGTGGACGTGACACCCGGCAGAAGAAGCAGCAGCGGCAG GATACACCTTTGTACCCTTGAATTGTTGTTGTTGATTCTCACATTAGCTC ACTACCGCCGCAGTCTAGCCCGTGGTCACAAACCAGGCCCATATCGTGCT AGGAGGAAAAAAGAAAAAGAAAATAAATGGACTATGATCACCCAGTCAAA TCAGATAGGGTACCGTTGGGGTACCATCTGCGATTGCCAAAGTACCAAAC GAAATACAGAAAAAAATAACAGGTTCGAAAGAAAAAACAAAAATTGGAAA CAGTACAAAAAAAAAACTCTTGAATATGTACCCATGTACTCTTTCGCAGC AGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGAGCTTAAGTAGTCACCAT CATCAGTAACACGAGTACAAGCGGTAGCACCTCCAACCGGCAGTAGTCCT TTTCCTTTTTTCTCTGTTCCATTCCACGTATATTATCTACTTCTTGCCGT TGGGCTTTGCGTCCTCCTGTCCGTGACGATTTTTTTTTGATTGGAACCAC CCGCCCCAACGACGACCTCGTATCACACCATACCGGCGCGCCGCCTTGTA CAACACCACGACTACGACTATCTACTTAGCTGCTTCACCTCTTGGCAGAT CCGAAGCACGATTCTTGCCCCGCCGTCGTATCGTGCCCACTTCAGAACGT CGACCCCCTTCGGCAAAAAAAATATAGCACGTCGAACCATTCCAAGGACA GCCGTTGGACCGCGTGCCTACATCAGAACGTGTCGAGATGCACCCCTTTG GTAGCTTACGTGTCGAACTATAGTAATCTACTTTCAAAGAGTCGCTCCTC AGATGCTATGTTTATGTTTTACATGGCTGGCACACTTCCTTCCCATGAAC CAGCGGCGAAGGTGTTGGCACAGTGACTACAGGGTTGTAGGGAACCCTAT TTGAGCTCGCTGCCTTCAGAAATGATGGCGCAGTGATCGGTGTTGCCGAC TGAAACGTAGTGGTGTACAACATCGTCGTCTTCTCGCCGAGAACACCGTT GCGGAGACGCCGGGGTGATTTGGCCAATCACGTGGTGTGCCGACACGGGC TCACTTGGAAGGTCAAATACCCTTTTCAAATATCCTTTCTTTCCGGGATT TTCCGGAATGTGAGAAAATGAATCCTTTGTGGTGCAGTCACGGGGCCTCT CGGGGAAACCTCGGGGAAACCAAGAAAGGATATTTGAGATAAGCGCAAAC ACTCTTATATTTTTATGATTTCCAGATGATTCCGGCACTTGGCACCTCTG ATTTACATTTGAGTCGTATTTTGTCCTGGACTATGAGGGTGGGTCTTGAC AGAAAATGTCCGCATCTAAAATCTAAAATCGAACTTTTGATTTCGATTTT AGAAGCGGGTTGTGTCCGATGTGCCGCAGCTGCGTTCATCTAAAATCTTA AAAGCGGAGGAACAAAAAAATGAAAGAAATGAGGAGGAATGACTAGCAGG TCAGAGGACAGACGGTTGTGAAATGCATGCTGTGACGATTTCAAGACTAC CGTAGGTCGCATAAGATACCACACCCCCCTTGGATACCACACCCCCTTAC CCCCCCCTACAAGAAACCACACCCGGGTGATATCATACAATTTTGGAATC CAAACTCGATGGCCGATTTATCACACGGGTCACATTAGATATCACACCCC ATAAGTTGCGCCGCATTTCACCAGGAGGCCCGTTGTCATCACCCCGGTGA TGACCGTGACACACACTCGCACACACAAAGACAGACGTGCAGAGTGCAGA GTACGGCACCCACAGCACCACCACGGATACCGGTACCACCGGCAGCATGG AAGAGAGGACCACCGACAGCGTGGAGGTGAAGTCAGACAGCCTTTCAAAC ACCGCCGCGGCTCCCACAGTGGCTCCCACAGCGGCTCCCACAGGGGCTCG TACCGCCGCTCCAGCAGCGGCTTCTCCGGCGGCTCCACGTTCGATCACAG CTTTTTTTCGAAGCAACGAACAACTCTCTAACCGGTACTTTGGCTCCTAC TGCTGCCGCTTCTCCCACAACGCCCGCCAATGTGCCAGCCTGCCGCTGCT CCCACACCCCCTTTGTTGCCAGCAACAATGCTGGGGAAGGCATACGGTAT CTGTACTCGTATACCGGTAAGATATCACACACCCTTGTTAGCACACCTCT TTTGATGCCTGCAACATTGTTGGGGGAGGTATACGGTATGTGTATATGAT ACCACACCCCGTTGTTATCACACCCCCTTTACTGCCAGTAACAATGTTGG GGAAGGCATACGGTACCTGTTTATGTTATCACACACCCTTGTTTTCACAC CCCCTTGTTATCACACCCCCCTGATTGCCGAGCGCTGGTGAAACGCATTT TATCACCCGGGTCACCGAAGATATCACACCCCCCCTACCCCCCCTACAAG AAATCACCCCGAGTGATAATATTTTCAAACCCAAAAATGTCATCACCGGG GTGTTATTTATTATGCGACCTACGGTAGTGCGGGAGCTATGATACCGTGC CTCTATAGCAGTGCACGATAGTGCCCCACGTCGGCCTGACTCAGGTGCTT GGTAGTACTTACGTTGGGATCGATAACCTAAGAACTCGGCATGAAATGTG TCGTTGCGTGTTGAACATCCTACCTGCCTACCCGTTCGGAAGCCACAAAG GCCCAAAATGTCAGCCGCCGTGGCCAACAACTTTCTGCACACTTCTGCAC ACTTTAGTGCTGCTGCTCGGATTCTCACCAGAACCCGCTGAAACAAAGTG CTCTCTTCTCTGGGGGTTCGCCGATTTCTGCAAAGGTATCACATTTGTAC AGAGGGAGTATCATACACGTTATGCTATGGCCATGAAAGTGGAGGCATAT CGATGTGCACCGGTGTGCTCCCGGAATGCACAGCAGCAAACACCTCTCTG CTCGTGTTGTAGGTCTGTTCGTTTATTTTCACCGCATTTTCGGTCGATTC AGCTAACCTTTTTGATTTCGTGAGAAAGAATTGCTTTTCAGAACAGAAAG CTGATTTCTAAAATCTCTACTGCTGGAGGGCTAGCATCGCACATCGCCCA ATGAGCCACTCTCGATTTTCGATTTTCGATTTTCGGTTTTAGATTCTAGA TTCTAGATTTTAGATGCCAGGTTCCCTCTGTTAAGACCGACCCTGGTGTC GTCTCCCCCACACCAAAAACAATACTTCGAAGGACATCATTGAATAATTG GATGGAAAAATTTTCAACTCTTTCCCCTCCCCCATCCCAAAAATGATGAA TTTCTAGGAGGAAATCTGCCTGAGATGTTATATACCCCGATTTACTTTTT GTTCACGGCATTTTTTTTTTTTTAGCGTGGTGTGATATTTCCGGGATCCA CTTCAGCTGTCACATTCCGTGTTACACGTGACGCCCCGGTAATGTAGTTG GTGACCGTAAAAACCTTCGCACAGCTCGGTCGTAAGGTCGACTCTCGGTG GAACGTACTTGTACCTGGTACGAAGGTGGAAAGCGATTATTTCGTGAGTA AACGGCATTCGACTTTAATTCGACGAGGGCAACGGATGTCCGAATGCCTC TCGCGATAAGAGTCATGACACCCACCTAAAAAGGAAGGTAGAGAAGAAAC AAAAATGAAATAAGTTTGTTGATCCTCTTCCTGTCTGTGTGACCCCGGCT GATGCGCCCAACAGATACCAAGAGGTGTAGACTGGCGCCCAGAATACATT GTACTCGAAGTAGACAACACAAACAACACCTTTATTGAATAGCTGGGGTT TTCTCGCGTATCGTATACCCCATCTTGGGTAGGTAGAATGTACATTGCCG AGAGCATCCTCCAATGATGGGATAAGTCAGAAGTAGTACAGACGATAGAT GGTGCAGAGCAGACTTCGGAATGGCTTTGGATGTGAAGACCACACACAGA CACACCTTGGACGAGACGAGACACGCCTCGCCGGCGATATAACCCCTCGT TTGAAGCAAATAACTTTAGCACGTCCACGCGTGCACTCGGAGACTAGCCT CACTTGACCAACCTACCCCTTTCGTTGAAGCATTCGTCCAAGCACGTCGA CCTACACCCATATAGCTACAGAGAGACCTAGCTGCATTCCAAATACATCG TTTTGCCACATCAGATACTGCTGCTGTGCGATACTTTTAGTACAGCAGTA TGCACTTGACCCCGAGTCGACTGGAGCACCGCTAGTCACAAGACCCGAGT ATCACATCACGTCCGGCATTCAGCCGTCGGGTCTCGCGCTCTCGAAAATC TTGTCATGAAGTGAGTCTTCCCAGTCTAACATACACATACCGGTACATGC ATCATCCACATCATGCTTGTTTCCCGAACGCTCTACTCCCGCTCGCGCGC GTGGTGACATGGAGTGTATCGCGCTGTTGGCTCGTCCCATTTGACTACCT CGTGGCGTCTTTTTTTCTTATTCGACACTCTGGGAGGACAATGTTAGGGT GGTACCAGTAGCTCGATTGACCGAGGACACTCGAAGGCATGTATGATATG CAGTGTGTATGGAATGAGGAAGGCTTGCCGATAAGAAAGAGAACAGAAAG CGAGCAGCGGCCGGCCTGTTTGTCGGTGAAAGAAAAACAAATCACACAGC ATCAAAGCACAACAAGCGGCGGAGTTCATAAATAACGCCAACCTAATCTC CCCTCCCCGTACTTTTCAATCATTGCGCTATTCTCACGATATAATTCGTA TGTTTAAGGCACGGAAAAGGATTTATCGAAAAGCAAGAGCAGCACCAAGC AGGCGGTGGATAGGAGCCAGGCGTTGGTGAAGTGGGCTGGCGGAGAGGCG GCTGCCACCGGCGTTTCGGCGGCTATGGTAGCCGTCGGAATGTCCACGGT CGTTATACCTGCTGTAGCGGTAAGATATACTTCGAAGTACGTGCGCAACG AATCATCATTTCCATCCACAAAAATATCTTGATTTTAATGTCGCTTCTCC CGTTCTTTCTCTCTCTCTCTCCCTCAGGGATCGGGTCGACCTTGTGTGAC ATTTGAGGGTTGAAGTACTTACCGCGGCAGTCTTTCATGCTCAAGGTTCC CGAACCTTTTTGAGTGCTTCCCATGAACGAACGCCTCAACCTAATGTGAT CCACAGGTCATTGTCTTAGTCGGGCACGTCGTGGTGCGAGGAAGCATCCG CGCGGTGAAGAAAAAGCTCAAGGTTCGTGCCGAACAGAAGGCACACCTGG AGCAGCTTAACCTCACGGAAACCTCAGTTCGATCGGCGACGGGGCACTTT ACGGTGCGCTTTGCTTCGGTTAATAGTTGACTCGTTTGGCACAGGTGAAA TGGAGAGCCTTGACTGCACGCGGTATCTCGCATATATATTTTTTGTAGTA GGACGGAGCAAAACTTGCAAACGATGCTGACAGTACAAATATAGGCCGTG CATGCTCAAAACACATTATGGGTAACGTGTGTCACACGAGACGACCACCA AATTGTCTGTTGAGCATGATAACCTCAGGGGAGCTGCAACGGGACATAAA TCTGATGAGTCATACTTGTAGAAACACAGGTAAACGGTCTTACTCTTTGA GCTCGTTGCTAATCTCCTCGACATCCTCATCTGGAGAACGGCGAGCACAT TGATGTGTTTGTAAGAAAAAGAAAAAATGTGCGACTTTCTGTGTCGCAAT AAGTCATTAAGAATACGTCGTACCTGATGAACCCAGTATGCATAGTAGCA GAGAAGGTTTGCATTCGCCGCGAACACCTCTTATCTATATGCCGCGGCAA GCATTGTTCAACAGTATTTCCATCCCGCCATTAACGAAGGTGTGACCATG AAACACACCCAGGCTCGTCACACGCATATCCAAGGAAAACAAGCCTCATA CAAGTACTTGCTTGAGGGTTGACACCTTCACACCTTTTTCATTATTGACG TTTTTTCAACGTATGTCTTCCTATTCTATCTGTTCCATTTTCTTGTTCTT CTTTGTCGAACAGGTGGTGCTGAACGGGTTGGGCCCCAACGGAGAGTTTA ACGCCTACGTGTCCCCCAACGACAACGCCTCCTACGCTCCGGTCAGCCCG GGCCACCTTAAGGGCATCTCGAAGCTAATCAGCGGCGCCACGAACTGCAA CGTCAGGGACATGGGAGGCTTCACCGAAGAAGCTTCCACGCCGTTCACAG TGCGCATCAGCATGCCGGACGTGCTGGCACTCATGAGGCAGTCGTGGGTG TACGAGCGGTTCTGCCAGACAAAGTGCCGGAGTATGACGGTGGTGGTTCT CCGGTCGCAACACAGCCGCGGGAAGGACAAACTGAGGGTGGCGTGGGAGA ACTCTGGCACCCTGGACTACACGAAAGCGCAGGTGTGTTTGTTGTATTGC ATGGTAGGTCGGCTTCCACTTCTACAGTGAGCCATGTAGGCAGTCTTCCC TTCTTGATTGATTCGGTCCCTGGCTCAAACGGTTGGGCAGGGATCCGCTA GATTATGACGGGCCATCTCCGAAATCGCTCTGTAGGCCGGTGCCCGGTGT GTCTTTGTCTTACTCGTATGAGTATTACCGTCTGACGTTGGCGTCAAATT CGTGGGGGTTCGTCTGTGACTACACATGAATGTGTGTAGTCACAAAAAAT GAGACAGAGGAAAGATCTTTTTCCATCGTCCGGCAGTCTTGACGTATGTC GTGCTGTACCTCGCCTTACCTATACTCACCCCACTTTGCCTTGCCTTGCC TTGTGTTCTGGATGCAAACTAAACGGCACCTGATAGGTGTACACTGAGAG AGACTGGAAGAAAACCAAATACGCTGGCAAGACCAAAACCATGCCGGAGG GAATCGCGGACGTGGACATGGCTCTCGAAAAGACCTTGGTCTTTGATTAG AGGGCATTTTCTATTCAACACCACTGCTGTGTGTAAAAACAAGTCAACAC ATCAATTTCCTTCGAGTCGACGGGCTTCTCGAACAGCGTGTCACCAGATG TGTGGCTATCTCGATAAGGGGCGTGCTGGTATCGGCCAAACGAGTGGTCT GTTCACGGGACTGCTGCATTGGCACTTTTACCAAGTTTAGTAGAACAGCC GCGACAATCCATGATACATTAAGTTTTATATCGCCGGGGCCGGGCATGCT CCGTGGTGTTACCTCTGTAATATATATGCTGTGCTACGTTTTCCGACCAG CTTCACTTCGACCACGTTAATGCTCGAAAGAGGTACAGTAGCTGCACTAC GCGTGCTGGCGTTTTTTATCGGTCCTCTTTGGATGATCTCGACAGACAGA CCGTGTTTCTGCGAATGTCACCGTGGTGTGAACAGATGCATCTTCTTCAT TTGGGAATGCACCCAGTACTTTGGTGAGGGTGTGTGGTTTTGTTTGATTG TAGGTAAGCTGTGATGTGTTTTTACTCGTGCCCCCCGTGCGTGGTTCCGA TCCATGTAGCTTTGAGGACTGAGTTGTTTCGTGTCGTGTGCGTGTTGTGC TGTGGGGTGTCGTGGGCAGCGTCGTATGTACCGAGGCTTGTCTCGGCATC CGTGTTGCCATACAGCAGTAGGGGGCGGGGGAGGTTAGGAGATATGTTTA TCTCTGAACAAAAACTTGGGCGGTGATCCGGAAACCAAGGGAGGAGTCGT TTTGTGTTGACACTGAAGGTATACGTTTAAAAACAATCGAGATGATGAGT GGTGGGGGCAAGGGATAATGTTGCACACACTATGATATGTGCCTTTCGCA CAGAGGAGCTACGCGACCGGATTTGCCAGCAATGAGGGAGAGCAAGTGCG CGCTTCGACCGCGCGCCTTGAGCGAATTTGAGCTGAAAAACACCATCCAC CGTCAAAAAGGCGAGACGAAAAATTGAACATACGGCAATAGTAGAAGCAG CAAAACCGTAGCACTGCTGCTGTCTCTAAAGGTTCTAAAGAGAGACCAGA GATCCCTGTAAGGATTTTCACAACAGAAGCGAGAAACTGAAATCTCGAAG TAGTTCAGAATACCGCAAGCGTGCTGGTGAAAAGAGCGCTTCACGCAAAA AGGCCCGCGGACGGGTGCTGGCG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig123:363454..373326-

>mRNA_P-littoralis_Contig123.73.2 ID=mRNA_P-littoralis_Contig123.73.2|Name=mRNA_P-littoralis_Contig123.73.2|organism=Pylaiella littoralis U1_48|type=CDS|length=840bp|location=Sequence derived from alignment at P-littoralis_Contig123:363454..373326- (Pylaiella littoralis U1_48)
ATGGCAGCAGCGGCTGGAGAAGACTACGACTCCGATATCTCAGGCTCAGG
CACGGAAAAGGATTTATCGAAAAGCAAGAGCAGCACCAAGCAGGCGGTGG
ATAGGAGCCAGGCGTTGGTGAAGTGGGCTGGCGGAGAGGCGGCTGCCACC
GGCGTTTCGGCGGCTATGGTAGCCGTCGGAATGTCCACGGTCGTTATACC
TGCTGTAGCGGTCATTGTCTTAGTCGGGCACGTCGTGGTGCGAGGAAGCA
TCCGCGCGGTGAAGAAAAAGCTCAAGGTTCGTGCCGAACAGAAGGCACAC
CTGGAGCAGCTTAACCTCACGGAAACCTCAGTTCGATCGGCGACGGGGCA
CTTTACGGTGGTGCTGAACGGGTTGGGCCCCAACGGAGAGTTTAACGCCT
ACGTGTCCCCCAACGACAACGCCTCCTACGCTCCGGTCAGCCCGGGCCAC
CTTAAGGGCATCTCGAAGCTAATCAGCGGCGCCACGAACTGCAACGTCAG
GGACATGGGAGGCTTCACCGAAGAAGCTTCCACGCCGTTCACAGTGCGCA
TCAGCATGCCGGACGTGCTGGCACTCATGAGGCAGTCGTGGGTGTACGAG
CGGTTCTGCCAGACAAAGTGCCGGAGTATGACGGTGGTGGTTCTCCGGTC
GCAACACAGCCGCGGGAAGGACAAACTGAGGGTGGCGTGGGAGAACTCTG
GCACCCTGGACTACACGAAAGCGCAGGTGTACACTGAGAGAGACTGGAAG
AAAACCAAATACGCTGGCAAGACCAAAACCATGCCGGAGGGAATCGCGGA
CGTGGACATGGCTCTCGAAAAGACCTTGGTCTTTGATTAG
back to top