prot_P-littoralis_Contig123.22.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig123.22.3
Unique Nameprot_P-littoralis_Contig123.22.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length462
Homology
BLAST of mRNA_P-littoralis_Contig123.22.3 vs. uniprot
Match: A0A6H5KNU9_9PHAE (CRIM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU9_9PHAE)

HSP 1 Score: 639 bits (1649), Expect = 8.540e-227
Identity = 344/460 (74.78%), Postives = 361/460 (78.48%), Query Frame = 0
Query:    1 MKKVSTGERIKFADLRRRSVGISRDADSDATQSEQRFVSELMDTTPSSSYEGETLRDGYAYNPPDPSVSDSPLARYESDGEGADEVVTGTQEGVGKADLIVKEDVPEVWFFKKVISGSDARFPKMTAHQEKYSFGFGHSSSTAVHGSSKTHPYMSRPVRISYSYMTDLLSAGPVVKSIFTVPQIPEETQQGSLLAAGLAAVKINASQSGLGGLLTGPRQRDDTMTLSDGESLMGDPRVDHGTDHGPGGCTAEQLIGALVSECKSRDLRSELTQGTDKYVLRMADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQAKVEPMLHVTIALHKGLNGPLTGTGAMEAPGAGASMTLEVDFQTPGHEDTHHMSMPIASEGGQRDLVRFRDSGLRSSAASADAVEVEKLLRTPPDNEATLDGQGGAEDAVKLRNMDTGEDIALAEIKDRVPPSLDPGELFRTKDV 460
            MKKVSTGERIKFADLRRRSVG+SRDADSDA QSEQRFVSELMDTTPSSSYEGETL DGYAYNPPDPSVS+SPLARYESDGE ADEVVT TQEG+GKADLIVKEDVPE                                                                            IPEETQQGSLLAAGLAAV+I ASQSGLGGLL G RQRDDTMTLSDGESLMGDPRVDHGTDHGPGGCTAEQLI ALVSECKSRDL SELTQG DKYVLRMADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQA++EPMLH+TIALHKGLNGPLTGTGAMEAPGAGAS+TLEVDFQTPG E THHMS+PIASE GQRDLVRFRDSG+R SAASADA EVEKLLRTPP N+  +  + G E+AVK+RNMDTGEDI LAEIKDRVPPSLDPGE+FR+KDV
Sbjct:   93 MKKVSTGERIKFADLRRRSVGVSRDADSDAAQSEQRFVSELMDTTPSSSYEGETLGDGYAYNPPDPSVSNSPLARYESDGEAADEVVTDTQEGIGKADLIVKEDVPE----------------------------------------------------------------------------IPEETQQGSLLAAGLAAVQIGASQSGLGGLLAGARQRDDTMTLSDGESLMGDPRVDHGTDHGPGGCTAEQLIRALVSECKSRDLGSELTQGADKYVLRMADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQAQIEPMLHITIALHKGLNGPLTGTGAMEAPGAGASITLEVDFQTPGQEGTHHMSVPIASESGQRDLVRFRDSGVRGSAASADAAEVEKLLRTPPGNKEQVVEEIGIEEAVKVRNMDTGEDITLAEIKDRVPPSLDPGEVFRSKDV 476          
BLAST of mRNA_P-littoralis_Contig123.22.3 vs. uniprot
Match: D7FJ13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ13_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 1.110e-104
Identity = 156/179 (87.15%), Postives = 167/179 (93.30%), Query Frame = 0
Query:  282 MADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQAKVEPMLHVTIALHKGLNGPLTGTGAMEAPGAGASMTLEVDFQTPGHEDTHHMSMPIASEGGQRDLVRFRDSGLRSSAASADAVEVEKLLRTPPDNEATLDGQGGAEDAVKLRNMDTGEDIALAEIKDRVPPSLDPGELFRTKDV 460
            MADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQA++EPMLH+TIALHKGLNGPLTGTGAMEAPGAGASMTLEVDFQTPG E THHMS+PIASE GQRDLVRFRDSG+R SAASADA EVEKLLRTPP N+  + G+ G E+AVKLRNMDTGEDI LAEIKDRVPPSLDPGE+FR+KDV
Sbjct:    1 MADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQAQIEPMLHITIALHKGLNGPLTGTGAMEAPGAGASMTLEVDFQTPGQEGTHHMSVPIASESGQRDLVRFRDSGVRGSAASADAAEVEKLLRTPPSNKEKVVGEIGMEEAVKLRNMDTGEDITLAEIKDRVPPSLDPGEVFRSKDV 179          
BLAST of mRNA_P-littoralis_Contig123.22.3 vs. uniprot
Match: A0A835ZDT3_9STRA (CRIM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT3_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 5.060e-19
Identity = 93/294 (31.63%), Postives = 128/294 (43.54%), Query Frame = 0
Query:  181 VPQIPE--ETQQGSLLAAGLAAVKINASQS-GLGGLLTGPRQRDDTMT-LSDGESLMGDPRVDHGTDHGP----GGCTAEQLIGALVSECKSRDLRSEL-TQGTDKYVLRMADDDWDPDLDFPGLDSSAVITDVGVDQFVLCHQAKVEPMLHVTIALHKGLNGPLTGTGAMEAPGAGASMTLEVDFQTPGHEDTHH-MSMPIAS------EGGQRDLVRFRDSGLRSSAASADAVEVEKLLRTPPDNEATLDGQGGAEDA---VKLRNMDTGEDIALAEIKDRVPPSLDPGELF 455
            V ++P+  ++   SLL+  LAAVK    Q  G+G     P       + LS  ES           +       GGC+A QLI A++ EC++ D+   L  +    + LR+ADD   PDLDFP LDS+A I DVGVD+FVLC      P+L V             G         G S+ L+V    PG ED    M +PI         G    L   R +  R+S  S                     G+GG+ D     ++RN+DTGE+I + +    VPP + P  LF
Sbjct:  103 VAKLPDSQDSNPTSLLSGALAAVKSQEQQGPGIGSAGWSPLMASIMESGLSRSESXXXXXXXXXXXEEADMADTGGCSARQLISAVLKECQASDIAPILHNRPPHDFDLRIADDG-QPDLDFPELDSAAAIIDVGVDEFVLCEAGGAVPLLVVEXXXXXXXXXXXKG---------GYSLVLQVSLFEPGREDQRRSMCLPIELLPDPLWYGASTTLQTRRRTSSRTSGIS---------------------GEGGSNDPSALTRIRNIDTGEEINVGDYDSMVPPGVSPQRLF 365          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig123.22.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KNU9_9PHAE8.540e-22774.78CRIM domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FJ13_ECTSI1.110e-10487.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZDT3_9STRA5.060e-1931.63CRIM domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031567Sin1, middle CRIM domainPFAMPF16978CRIMcoord: 250..317
e-value: 1.5E-7
score: 31.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig123contigP-littoralis_Contig123:131363..134028 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig123.22.3mRNA_P-littoralis_Contig123.22.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig123 131025..141364 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig123.22.3 ID=prot_P-littoralis_Contig123.22.3|Name=mRNA_P-littoralis_Contig123.22.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=462bp
MKKVSTGERIKFADLRRRSVGISRDADSDATQSEQRFVSELMDTTPSSSY
EGETLRDGYAYNPPDPSVSDSPLARYESDGEGADEVVTGTQEGVGKADLI
VKEDVPEVWFFKKVISGSDARFPKMTAHQEKYSFGFGHSSSTAVHGSSKT
HPYMSRPVRISYSYMTDLLSAGPVVKSIFTVPQIPEETQQGSLLAAGLAA
VKINASQSGLGGLLTGPRQRDDTMTLSDGESLMGDPRVDHGTDHGPGGCT
AEQLIGALVSECKSRDLRSELTQGTDKYVLRMADDDWDPDLDFPGLDSSA
VITDVGVDQFVLCHQAKVEPMLHVTIALHKGLNGPLTGTGAMEAPGAGAS
MTLEVDFQTPGHEDTHHMSMPIASEGGQRDLVRFRDSGLRSSAASADAVE
VEKLLRTPPDNEATLDGQGGAEDAVKLRNMDTGEDIALAEIKDRVPPSLD
PGELFRTKDVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031567CRIM_dom