prot_P-littoralis_Contig994.17.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig994.17.1
Unique Nameprot_P-littoralis_Contig994.17.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length238
Homology
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BLAST of mRNA_P-littoralis_Contig994.17.1 vs. uniprot
Match: D8LPH1_ECTSI (EsV-1-149 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPH1_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 3.970e-70
Identity = 127/240 (52.92%), Postives = 156/240 (65.00%), Query Frame = 0 
Query:    7 ILALPDDVLRPLLGFTKTHSYSMIGAVCRAFRDQFLPRERTTRTSKFTHSLELFDLAITLNISFKSASLLDDLISRDEIEVIPRALTRAEVEWDPFCVERAAEVGSFRVFRWLV---TTE--LAWLPENGHSSAANAGDLDMMRFLVESGAGFPDQRSFHAANERRDHAIASWLQELELDCSYIMTRAARDDNVDVFAQSPGDDD---GAEYITQAYIHGSFDVLEFFTCSVGSGPTAKD 238
            +L +  D L+ +L F K  SY++IG VCR FR+ +   ER TRTSK+T SL+LF  A   NI F+S  LLDDLISRDEI+VIP  LTR   EWD FCV+RAAE  S+R FRWL    TT+  L WL EN H +AA  G+L+MM +LVESGAGFPD  S       RD  I  WL+EL LD ++   +AAR+D+V VF Q+   DD      YI +A IHG+F+VLEFF   VG GPT  D
Sbjct:    4 LLLISKDALQHILSFVKADSYAIIGPVCRDFRNCYGSGERVTRTSKYTQSLQLFRQATATNIEFRSLCLLDDLISRDEIDVIPPLLTRG-YEWDHFCVQRAAETNSYRFFRWLQWLQTTDDGLPWLVENAHRAAAKEGNLEMMIYLVESGAGFPDSGSLAVT---RDCKIVEWLRELRLDPAHAFVKAAREDDVCVFEQTESFDDHGLNRMYIKEACIHGAFNVLEFFRVFVGVGPTPSD 239
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BLAST of mRNA_P-littoralis_Contig994.17.1 vs. uniprot
Match: Q8QND3_ESV1K (EsV-1-149 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QND3_ESV1K)

HSP 1 Score: 221 bits (563), Expect = 4.720e-68
Identity = 120/233 (51.50%), Postives = 153/233 (65.67%), Query Frame = 0 
Query:   10 LPDDVLRPLLGFTKTHSYSMIGAVCRAFRDQFLPRERTTRTSKFTHSLELFDLAITLNISFKSASLLDDLISRDEIEVIPRALTRAEVEWDPFCVERAAEVGSFRVFRWLVTTE-LAWLPENGHSSAANAGDLDMMRFLVESGAGFPDQRSFHAANERRDHAIASWLQELELDCSYIMTRAARDDNVDVFAQSPGDDD---GAEYITQAYIHGSFDVLEFFTCSVGSGPTAKD 238
            LP D L+ +L F K  S+++IG+VCR FR+ +   ER TRTSK+T SL LF  A   NI FKS  LLDDLISRDEI+VIP  L R   EWD FCV+RAAE  +++ F+WL TT+ L WL EN H +AA  G+L+MM +LV+SGAGFPD  S    N   D  I  WL+EL+LD ++   RAAR+D+V VF Q+   DD       + +A +HG+F+VLEFF   V  GPT  D
Sbjct:   54 LPKDTLQHILSFVKEDSFAIIGSVCRDFRNCYGSGERVTRTSKYTQSLRLFQQATAKNIEFKSLGLLDDLISRDEIDVIPSLLARG-YEWDHFCVQRAAETNNYKFFQWLQTTDDLPWLVENAHRAAAKEGNLEMMIYLVDSGAGFPDSGSRAVTN---DCKIVEWLRELQLDPAHAFVRAAREDDVCVFEQTESFDDHGLNRACVREACVHGAFNVLEFFRVFVDVGPTVSD 282
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig994.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPH1_ECTSI3.970e-7052.92EsV-1-149 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QND3_ESV1K4.720e-6851.50EsV-1-149 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 103..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig994contigP-littoralis_Contig994:77132..77845 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig994.17.1mRNA_P-littoralis_Contig994.17.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig994 77132..77845 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig994.17.1 ID=prot_P-littoralis_Contig994.17.1|Name=mRNA_P-littoralis_Contig994.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=238bp
MHGAPAILALPDDVLRPLLGFTKTHSYSMIGAVCRAFRDQFLPRERTTRT
SKFTHSLELFDLAITLNISFKSASLLDDLISRDEIEVIPRALTRAEVEWD
PFCVERAAEVGSFRVFRWLVTTELAWLPENGHSSAANAGDLDMMRFLVES
GAGFPDQRSFHAANERRDHAIASWLQELELDCSYIMTRAARDDNVDVFAQ
SPGDDDGAEYITQAYIHGSFDVLEFFTCSVGSGPTAKD
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