prot_P-littoralis_Contig991.19.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig991.19.2
Unique Nameprot_P-littoralis_Contig991.19.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length115
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig991.19.2 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 8.160e-21
Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 0 
Query:   51 DNVSYVLARTIRSNLHQEAAKLIGCTGMGNQCKRGQCFARAMQMFPGKGMDRIPTEVVLALLRH 114
            DNVSYVLART+R  L   AA+ IG +G GNQC+RG CFARAM MF GKGM+ IP +VVLALLR+
Sbjct:  160 DNVSYVLARTVRRILQYLAAQEIGASGQGNQCRRGDCFARAMGMFFGKGMEGIPRDVVLALLRY 223
[Close]
BLAST of mRNA_P-littoralis_Contig991.19.2 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 6.840e-8
Identity = 27/47 (57.45%), Postives = 32/47 (68.09%), Query Frame = 0 
Query:   44 KGEGGKYDNVSYVLARTIRSNLHQEAAKLIGCTGMGNQCKRGQCFAR 90
            K    + DNV YVLART+RSNL   AA+ IG TG GNQC+RG   +R
Sbjct:  120 KARDSEGDNVPYVLARTVRSNLQYLAAQEIGATGQGNQCRRGMFCSR 166
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig991.19.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7P3_9PHAE8.160e-2168.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ5_ECTSI6.840e-857.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig991contigP-littoralis_Contig991:82152..83137 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig991.19.2mRNA_P-littoralis_Contig991.19.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig991 81998..83137 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig991.19.2 ID=prot_P-littoralis_Contig991.19.2|Name=mRNA_P-littoralis_Contig991.19.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=115bp
ARCLSRGGTRNTPTGRQLAAINRASSCLNYYYYSRQPGRAGSPKGEGGKY
DNVSYVLARTIRSNLHQEAAKLIGCTGMGNQCKRGQCFARAMQMFPGKGM
DRIPTEVVLALLRH*
back to top