prot_P-littoralis_Contig10.185.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig10.185.3
Unique Name	prot_P-littoralis_Contig10.185.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	473

Homology

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BLAST of mRNA_P-littoralis_Contig10.185.3 vs. uniprot
Match: D7FQF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF3_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 2.100e-83
Identity = 202/411 (49.15%), Postives = 237/411 (57.66%), Query Frame = 0

Query:   63 GLESVKTALLAAHGDVRLQCKAANALASLCMSEEVARGFSAAPNSSAVVDRLGDMLRSRSQWAQADAAGCLGWLIGNIEG-TALHEIVPFVTQLMVKYTITDDEVFIREERQRSERGSWRRNRISKAGDNRGXXXXXXXXXXXXXSKESNQDEADQEQARERMDTIRVYTLIFLLKASHTDPSTMPAMVEAGAIPGLLRHLASAREESPYSQQQXXXXXXXXXENPAVHEGFHTRQKGRIFGGHRHRTDEDLDHEQKDQSSPSFLLAARLLYAFSVDSSVRKSLLEAKCLPPLIRIRRRLQ---AAEAAAXXXGTAAGSTVEPELAC--IGTKDLEGKTALLAGKGALAVEEEGADLGNQTAHPSSRCTAAGNENSSCSERGVKQMDGESGQPPLEAMVGFLVDQLVGRAS 467
            GLE+VK ALL  H D+RLQCKAANALASLCMSEEVARGF+AAPNSSAVVDRLGDMLRSRSQWAQADAAGCLGWL+G + G TALHE++P VT+LMV++T  DDEVFI EERQR ++  W R+R S +   RGXXXXXXXXXX             ++QARERMD IRVY+LIFLLK    D                                                     R +G +FG   H TD +      DQ+ PS LLAARLLYA S+D   R SLLEAKCLPPLIR+RR+L    AAEA  XXX     + V+P L C  I      G  A     G   VE+EG  +GNQ A  S    A G+ +S     G+            E +V  +VDQLVGR++
Sbjct:   17 GLEAVKDALLKTHADIRLQCKAANALASLCMSEEVARGFTAAPNSSAVVDRLGDMLRSRSQWAQADAAGCLGWLVGTLAGGTALHELIPLVTRLMVRHTTKDDEVFISEERQREQQAVWGRSRSSNS---RGXXXXXXXXXXDK-----------EDQARERMDNIRVYSLIFLLKKQEADS---------------------------------------------------VRARG-VFGQRHHGTDGNAADGGGDQTPPSLLLAARLLYAISLDPGGRSSLLEAKCLPPLIRLRRQLHTEAAAEATXXXXXXXTTAAVQPALECTKIPAGPNSGSAAFARKGGTEEVEKEGF-VGNQQAQHSGGDVATGDSSSEPDVEGI------------EVIVSLIVDQLVGRSN 348

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BLAST of mRNA_P-littoralis_Contig10.185.3 vs. uniprot
Match: A0A5D6YD55_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD55_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.790e-6
Identity = 47/121 (38.84%), Postives = 65/121 (53.72%), Query Frame = 0

Query:   34 AIADAMTEVAALPCSPEGL----LLRSSVAAGGGLESVKTALLAAHG--DVRLQCKAANALASLCMSEEVARGFSAAPNSSAVVDRLGDMLRSRSQWAQADAAGCLGWLIGNIEGTALHEI 148
            A  DA+T +AALP    G+    LL  S    G        ++AA    DVRL+CKAA+AL SLC+S  VA       + +A +  L  M  SR++WAQADA   LGW++   +  AL ++
Sbjct:   61 AFVDALTTIAALPVDALGMETRRLLVDSGECDGEAGDAAARVVAALDCRDVRLKCKAASALGSLCVSR-VAGQRLLELHGAAALRSLARMATSRNRWAQADALAVLGWVVVIADERALAQV 180

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig10.185.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig10.185.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FQF3_ECTSI	2.100e-83	49.15	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A5D6YD55_9STRA	2.790e-6	38.84	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 25..381 e-value: 4.6E-9 score: 37.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..318
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 415..452
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 415..439
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..318
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..222
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 74..366

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig10	contig	P-littoralis_Contig10:670889..674863 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig10.185.3	mRNA_P-littoralis_Contig10.185.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig10 670818..675159 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig10.185.3 ID=prot_P-littoralis_Contig10.185.3|Name=mRNA_P-littoralis_Contig10.185.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=473bp
MNEPFSVIKLAPAARNVNVGLICSRLRRTTDREAIADAMTEVAALPCSPE
GLLLRSSVAAGGGLESVKTALLAAHGDVRLQCKAANALASLCMSEEVARG
FSAAPNSSAVVDRLGDMLRSRSQWAQADAAGCLGWLIGNIEGTALHEIVP
FVTQLMVKYTITDDEVFIREERQRSERGSWRRNRISKAGDNRGGGGGGGV
GRSSGGSKESNQDEADQEQARERMDTIRVYTLIFLLKASHTDPSTMPAMV
EAGAIPGLLRHLASAREESPYSQQQRQWQQQQQQENPAVHEGFHTRQKGR
IFGGHRHRTDEDLDHEQKDQSSPSFLLAARLLYAFSVDSSVRKSLLEAKC
LPPLIRIRRRLQAAEAAAAAAGTAAGSTVEPELACIGTKDLEGKTALLAG
KGALAVEEEGADLGNQTAHPSSRCTAAGNENSSCSERGVKQMDGESGQPP
LEAMVGFLVDQLVGRASPASGH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold