prot_P-littoralis_Contig122.75.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig122.75.1
Unique Nameprot_P-littoralis_Contig122.75.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length141
Homology
BLAST of mRNA_P-littoralis_Contig122.75.1 vs. uniprot
Match: A0A6H5KFX8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX8_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.890e-20
Identity = 55/128 (42.97%), Postives = 73/128 (57.03%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVMQ--LQGPALLSACCTFDANCVHPRWRNIRSLQDEKWTASELVPDKHKWTAVGEGPLWDG 126
            M+ARTSL  F+ L +  DV    +  V YKLT    S+++V G G  +LCSCL+LLQHG PCRH FAV+   +    L  +  TF+A CVH RWR    + DE W+ S ++       + G G  WDG
Sbjct:  103 MWARTSLEDFLSLTQ--DVPTSAIFAVRYKLTPNRPSHLMVFGPGDFHLCSCLRLLQHGLPCRHYFAVLLSFIGEKDLPGSGHTFNAACVHNRWRQAPDVDDEPWSVSLVLG------SAGHGGGWDG 222          
BLAST of mRNA_P-littoralis_Contig122.75.1 vs. uniprot
Match: A0A6H5JP13_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP13_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 3.750e-20
Identity = 55/128 (42.97%), Postives = 73/128 (57.03%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVMQ--LQGPALLSACCTFDANCVHPRWRNIRSLQDEKWTASELVPDKHKWTAVGEGPLWDG 126
            M+ARTSL  F+ L +  DV    +  V YKLT    S+++V G G  +LCSCL+LLQHG PCRH FAV+   +    L  +  TF+A CVH RWR    + DE W+ S ++       + G G  WDG
Sbjct:  466 MWARTSLEDFLSLTQ--DVPTSAIFAVRYKLTPNRPSHLMVFGPGDFHLCSCLRLLQHGLPCRHYFAVLLSFIGEKDLPGSGHTFNAACVHNRWRQAPDVDDEPWSVSLVLG------SAGHGGGWDG 585          
BLAST of mRNA_P-littoralis_Contig122.75.1 vs. uniprot
Match: A0A6H5KG54_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG54_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.310e-19
Identity = 54/127 (42.52%), Postives = 72/127 (56.69%), Query Frame = 0
Query:    2 YARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVMQ--LQGPALLSACCTFDANCVHPRWRNIRSLQDEKWTASELVPDKHKWTAVGEGPLWDG 126
            +ARTSL  F+ L +  DV    +  V YKLT    S+++V G G  +LCSCL+LLQHG PCRH FAV+   +    L  +  TF+A CVH RWR    + DE W+ S ++       + G G  WDG
Sbjct:  658 WARTSLEDFLSLTQ--DVPTSAIFAVRYKLTPNRPSHLMVFGPGDFHLCSCLRLLQHGLPCRHYFAVLLSFIGDKYLPGSGHTFNAACVHNRWRQAPDVDDEPWSVSLVLG------SAGHGGGWDG 776          
BLAST of mRNA_P-littoralis_Contig122.75.1 vs. uniprot
Match: A0A6H5KAB1_9PHAE (SWIM-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAB1_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.710e-19
Identity = 54/128 (42.19%), Postives = 72/128 (56.25%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVMQ--LQGPALLSACCTFDANCVHPRWRNIRSLQDEKWTASELVPDKHKWTAVGEGPLWDG 126
            M+ARTSL  F+ L +  DV    +  V YKLT    S+++V G G  +LCSCL+LLQHG PCRH FAV+   +    L  +  TF+A CVH RWR    + DE W+   ++       + G G  WDG
Sbjct:  489 MWARTSLEDFLSLTQ--DVPTSAIFAVRYKLTPNRPSHLMVFGPGDFHLCSCLRLLQHGLPCRHYFAVLLSFIGEKDLPGSGHTFNAACVHNRWRQASDVDDEPWSVYLVLG------SAGHGGGWDG 608          
BLAST of mRNA_P-littoralis_Contig122.75.1 vs. uniprot
Match: A0A6H5L372_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L372_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 4.980e-19
Identity = 56/133 (42.11%), Postives = 75/133 (56.39%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVM-QLQGPA----LLSACCTFDANCVHPRWRNIRSLQDEKWTASELVPDKHKWTAVGEGPLWDGGE 128
            M+ARTSL AF+DL+E  D+ IE  V V YK  A   S++VV G    +LCSCLQLL+ G PCRH FAV+  L G       ++   TF+  CVH RWR    + D  W+ S ++      ++ G    WDG +
Sbjct:  237 MWARTSLSAFLDLIE--DIPIELFVAVRYKRAANRPSHLVVFGLHNFHLCSCLQLLRRGLPCRHYFAVLVNLIGRTGESDEMAFTHTFNGACVHNRWRRREVVNDSPWSISSVL------SSSGHSVGWDGND 361          
BLAST of mRNA_P-littoralis_Contig122.75.1 vs. uniprot
Match: A0A6H5KBY4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY4_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 6.350e-19
Identity = 58/131 (44.27%), Postives = 74/131 (56.49%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVM-QLQGPA----LLSACCTFDANCVHPRWRNIRSLQDEKWTASELVPDKHKWTAVGEGPLWDG 126
            M+ARTSL AF+DL+E  D+ IE VV V YK TA   S++VV G    +LCSCLQLL+   PCRH FAV+  L G       ++   TF+  CVH RWR      D  WT S ++      ++ G    WDG
Sbjct:  924 MWARTSLSAFLDLIE--DIPIELVVAVRYKWTANRPSHLVVFGPHNFHLCSCLQLLRRRLPCRHYFAVLVNLIGRTGESDEMAFTHTFNGACVHNRWRRREDGNDSSWTISSVL------SSSGHCVGWDG 1046          
BLAST of mRNA_P-littoralis_Contig122.75.1 vs. uniprot
Match: A0A6H5KB76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB76_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.170e-18
Identity = 57/136 (41.91%), Postives = 80/136 (58.82%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVM-QLQGPA----LLSACCTFDANCVHPRWRNIRSLQDEKWTASELVPDKHKWTAVGEGPLWDGGENLQ 131
            M+ART L AF+DL+E  D+ IE VV V YK TA   S++VV G    +LCSCLQLL+ G PCR  FAV+  L G       ++   TF+ +CVH RWR  +  +D  W+ S ++      ++ G G  WDG + ++
Sbjct:  514 MWARTLLSAFLDLIE--DIPIELVVAVRYKWTANRPSHLVVFGHHNFHLCSCLQLLRCGLPCRDYFAVLVNLIGRTGESDEMAFTHTFNGSCVHNRWRRRKDGKDLPWSISSVL------SSSGHGVGWDGHDEVR 641          
BLAST of mRNA_P-littoralis_Contig122.75.1 vs. uniprot
Match: A0A6H5K9T1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9T1_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 4.090e-18
Identity = 56/131 (42.75%), Postives = 72/131 (54.96%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVM-QLQGPA----LLSACCTFDANCVHPRWRNIRSLQDEKWTASELVPDKHKWTAVGEGPLWDG 126
            M+AR SL AF+DL+E  D+ I+ VV V Y   A   S++VV G    +LCSCLQLL+ G PCRH FAV+  L G       ++   TF   CVH RWR      D  W+ S L+      ++ G G  WDG
Sbjct: 1147 MWARASLSAFLDLIE--DIPIQLVVAVRYMRAANRPSHLVVFGPHNFHLCSCLQLLRRGLPCRHYFAVLVNLIGRTGESDEMAFIHTFKGACVHNRWRRREDGNDSPWSISSLL------SSSGHGVGWDG 1269          
BLAST of mRNA_P-littoralis_Contig122.75.1 vs. uniprot
Match: A0A6H5KKN6_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN6_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 2.190e-11
Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 0
Query:    1 MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVM 69
            M+A TSL A +DL+E  D+ IE VV V YK T    S++VV G   ++LCSCLQLL+ G PCRH FAV+
Sbjct:  273 MWAPTSLSASLDLIE--DIPIELVVAVRYKWTPNRPSHLVVFGPHNLHLCSCLQLLRRGLPCRHYFAVL 339          
BLAST of mRNA_P-littoralis_Contig122.75.1 vs. uniprot
Match: A0A6H5KN91_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN91_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 5.980e-8
Identity = 37/108 (34.26%), Postives = 55/108 (50.93%), Query Frame = 0
Query:    4 RTSLRAFVDLLEGSDVVIEHVVRVSYKLTA--TAASNVVVLGAGGVYLCSCLQLLQHGFPCRHVFAVMQLQGPALLSACCTFDANCVHPRWRNIRSLQDEKWTASELV 109
            RTS++ FVD++EG DV +   +  S+   A   A  ++V LG  G  LC+CL+ L  G  CRH F  M+            F+  C+ PRWR+    ++  WT + L 
Sbjct:   47 RTSVKFFVDMVEGHDVDLLVRITTSFPNPAGGPAYGHLVALGPDGFVLCTCLRFLVDGLCCRHAFLAMREMDFG-------FNPGCIAPRWRD----EEMSWTLAPLA 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig122.75.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KFX8_9PHAE1.890e-2042.97SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JP13_9PHAE3.750e-2042.97SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KG54_9PHAE1.310e-1942.52SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KAB1_9PHAE1.710e-1942.19SWIM-type domain-containing protein (Fragment) n=1... [more]
A0A6H5L372_9PHAE4.980e-1942.11SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KBY4_9PHAE6.350e-1944.27SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KB76_9PHAE1.170e-1841.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9T1_9PHAE4.090e-1842.75SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KKN6_9PHAE2.190e-1155.07SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KN91_9PHAE5.980e-834.26SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 29..73
score: 9.804279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig122contigP-littoralis_Contig122:281327..281749 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig122.75.1mRNA_P-littoralis_Contig122.75.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig122 280750..285874 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig122.75.1 ID=prot_P-littoralis_Contig122.75.1|Name=mRNA_P-littoralis_Contig122.75.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=141bp
MYARTSLRAFVDLLEGSDVVIEHVVRVSYKLTATAASNVVVLGAGGVYLC
SCLQLLQHGFPCRHVFAVMQLQGPALLSACCTFDANCVHPRWRNIRSLQD
EKWTASELVPDKHKWTAVGEGPLWDGGENLQGAGQLSGGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM