mRNA_P-littoralis_Contig122.40.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig122.40.2
Unique NamemRNA_P-littoralis_Contig122.40.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig122.40.2 vs. uniprot
Match: D8LLI2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI2_ECTSI)

HSP 1 Score: 670 bits (1729), Expect = 3.440e-233
Identity = 391/661 (59.15%), Postives = 468/661 (70.80%), Query Frame = 2 
Query:    8 MLNTKHFIGALSQMGVPVTQQEAEEVMAHYSVEDADTVE---AEIPIADLLNDAVKGAPGLLDDDQSVTGRLMGSSQSHRGVMETSETKKPVTTMIKAFRAKLRELIDKRVRHVGGSPGHILKSLLLNWDTERNGALDNKQLRGALRTFNMRLSATQAAEVSRHYAKNGNEALGCDSMQLVEDVCGYDQGPFVYQTWKEASDQMGRGSDSSSVATSGRENSHRNGDTSDRTQSSLHFTARPRKNLSNRLVDKFKLRLRDALEQTIKNKGGVSHAIIREAFLDWDTDASGKLNPRELVGALKRMGVRMTDDEANATVAYYDLDGTGEMSYELLCKEIEAMSHPMLSYIEEVDVLSGLDQVVREPVAVKKALESIRAGVAVAARRAAESPDTLPPILGRDLLEGTCLRFDTQDNGVLGVDELRQIWRELKISLRKSETKALVAWFDRSTANRLHYADLCDAIFGRSSAG-------PDALYSSRKQEERRPLQQAPPRPHVLQAQRSAALALGESSSSSNS----SVAYATPLRTSMQELKRLAAEKDDRLASKTAWNWQGHPPAAGDRNPEFGEGYRKKSSEPGSGDPPGSGVAPVRFRGVLKASGEAIVAEKARIEKRLKEVQRERALLLREKKRVECWRDTTTGRGRTTSSTPDAPANKC 1948
            M++ +H +GALSQ+GV VT+ E EE M HYS +DA  VE    +IP ADLL DA  GAP L +  QS+T RLMGS++S   ++  S + K  + MI+AFR KL+++IDKRV++ GGSP  ILKSL LNWDTER GALD KQLRGALRT NMRLSATQA E++R YAKNG+ A GCD MQLV+DVCGYDQG FV Q  KE +D+ G    S+ V  S     +   + SDR  +SL FTARP +  SNR+VD+FK+RLRDALEQTIK KGGVSHAIIREAFLDWD DASGKL+PRELVGALKRMGV  T+DEANA V YYDLDGTGEMSYELLCKEI+ MSHPMLSYIEEVDVL+GLD+ VREP  VK A+E IR GV  AA+RAA S  TLP I  RDLLEGT LRFD QD+G++GVDELRQ+WRELKI LR SETKA+VAW DRSTA +LH +DLCDA+FG S +G       P  L +     ER    +  P+PHV+QA RSAALA+G +SS S+S    S+AY      S ++ + +AA+K DR A   AWNWQG    A  +  + G G  + S++P +G                  SGEA+VAEKARIEKRLKE++RE+ALLLREK  +ECW +   GRG   S  P    NKC
Sbjct:    1 MISKEHLVGALSQLGVSVTRMELEETMNHYSTQDASRVENARCQIPHADLLRDAAAGAPSLFECGQSITERLMGSARSQGSLLGKSRSAKDESPMIRAFRTKLQQVIDKRVKYAGGSPSRILKSLFLNWDTERIGALDTKQLRGALRTLNMRLSATQAKELTRFYAKNGDPAAGCDCMQLVDDVCGYDQGLFVNQLPKEQTDKTGGWDGSAPVVASDGNPGNSTSEGSDRNHASLQFTARPHEKPSNRVVDRFKMRLRDALEQTIKTKGGVSHAIIREAFLDWDADASGKLDPRELVGALKRMGVYATEDEANAVVEYYDLDGTGEMSYELLCKEIKTMSHPMLSYIEEVDVLNGLDRTVREPAVVKNAVERIRVGVTAAAKRAAGSASTLPLISPRDLLEGTILRFDHQDSGLVGVDELRQVWRELKICLRTSETKAVVAWLDRSTAKKLHTSDLCDAVFGVSRSGHDCNGNSPPGLLAPNNLGERH--SKPRPKPHVVQAHRSAALAMGAASSGSSSEDSGSIAYPPLPLPSKKDRREVAAKKFDRRA---AWNWQGPAADAVAQRVDPG-GKNEGSNKPVAG----GXXXXXXXXXXXXXSGEAVVAEKARIEKRLKELRREKALLLREKNGMECWGER--GRGSNPSYVP---MNKC 646
[Close]
BLAST of mRNA_P-littoralis_Contig122.40.2 vs. uniprot
Match: A0A7S1TRY6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRY6_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.910e-48
Identity = 154/499 (30.86%), Postives = 240/499 (48.10%), Query Frame = 2 
Query:    2 SGMLNTKHFIGALSQMGVPVTQQEAEEVMAHYSVEDADTVEAEIPIADLLNDAVKGAPGLLDDDQSVTGRLMGSSQSHRGVMETSETKKPVTTMIKAFRAKLRELIDKRVRHVGGSPGHILKSLLLNWDTERNGALDNKQLRGALRTFNMRLSATQAAEVSRHYAKNGNEALGCDSMQLVEDVCGYDQGPFVYQTWKEASDQMGRGSDSSSVATSGRENSHRNGDTSDRTQSSLHFTARPRKNLSNRLVDKFKLRLRDALEQTIKNKGGVSHAIIREAFLDWDTDASGKLNPRELVGALKRMGVRMTDDEANATVAYYDLDGTGEMSYELLCKEIEAMSHPMLSYIEEVDVLSGLDQV------------------------------------VREPVAVKKALESIRAGV-AVAARRAAESPDTLPPILGRDLLEGTCLRFDTQDNGVLGVDELRQIWRELKI-SLRKSETKALVAWFDRSTANRLHYADLCDAIFG 1384
            SG +N    + A   +GV ++++EA +++ +Y  E     + EI   DLL D  KGAP  L      T RL         VM           ++K F  +LR+L+ K++R  GG+   I++ + L WD +++G LD ++LRGA R F +RLSA +A  +  +Y+    +  G   M   + V     G   Y        Q   G+D      S R  S      + RT+  + FTARP++   N +V+  K+R+R  LE+ +K KGG   + IRE FL WD DASGKL+  E+ GAL+R+ +  +DDEA+A V YYD    GEMSYELL +++ +   P L   E+ D ++    +                                    VR P +V+  L +++  V + AA++  +       + GRD   GT LR DT+ +GVL   E+    R++ I S+R+ +   L  WF R    ++ Y  + + I+G
Sbjct:  108 SGEMNPDELVNACRMLGVLLSRREAVDLIEYYDQEG----DGEIKYTDLLEDISKGAPHFLQHAVGSTPRLPPDEIPEPKVMPG---------LVKDFIGRLRQLLLKKMRVDGGTEFSIIRKVFLGWDADQSGQLDKEELRGAARDFGLRLSAREAGIIVDYYS----DTEGAHEMSYQKLVKDLTNGTTHYL-------QHISGNDVRRELESARARS------TCRTEREVFFTARPKRKPRNMMVEALKVRIRRRLEELMKEKGGTVTSHIREVFLFWDGDASGKLDAGEVKGALQRLHIYCSDDEASAMVHYYDAGTAGEMSYELLIQDV-SRGVPSLLEQEKFDSINWTTTMSDLGNFRPAPEVASTAPSTERFSEMRLPVANSGAVTVRIPGSVRTILSNLQTAVESAAAQKNLKVTSMAQQVSGRDYFHGTLLRKDTRGSGVLSGREILAAIRDMHITSVREDDVTRLAQWFHRGDG-KVPYETMINEIWG 574
[Close]
BLAST of mRNA_P-littoralis_Contig122.40.2 vs. uniprot
Match: F0YH50_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH50_AURAN)

HSP 1 Score: 156 bits (394), Expect = 4.070e-36
Identity = 138/453 (30.46%), Postives = 213/453 (47.02%), Query Frame = 2 
Query:    2 SGMLNTKHFIGALSQMGVPVTQQEAEEVMAHYSVEDADTVEAEIPIADLLNDAVKGAPGLLDDDQSVTGRLMGSSQSHRGVMETSETKKPVTTMIKAFRAKLRELIDKRVRHVGGSPGHILKSLLLNWDTERNGALDNKQLRGALRTFNMRLSATQAAEVSRHYAKNGNEALGCDSMQLVEDVCGYDQGPFVYQTWKEASDQMGRGSDSSSVATSGRENSHRNGDTSDRTQSSLHFTARPRKNLSNRLVDKFKLRLRDALEQTIKNKGGVSHAIIREAFLDWDTDASGKLNPRELVGALKRMGVRMTDDEANATVAYYDLDGT------GEMSYELLCKEIEA-----MSHPMLSYIE--EVDVLSGLDQVVREPVAVKKALESIRAGVAVAA--RRAAESPDTLPPILGRDLLEGTCLRFDTQDNGVLGVDELRQIWRELKISLRKSETKAL 1315
            SG L+ + F  A+  +G  V   EA  V+ +Y  +       E+  A  + D  +     ++         +G++ +  G  + S     V   IK  RAKL   I K     G     +++   LNWD + +G LD ++L GAL    + LS ++A+++   Y  +   A+   +  LVEDVC   +G   +    E  D   R +  S+ A +  E         D       FT RP +   N L ++FK++LR A+E  I ++GG   +I+REAFL WD+DASG+LN RE +GA+ R+G+ M++  A   V YYD  G       GE+ Y  L  EI       +SHP+            +  D  V  P ++ ++ + +RA V  AA   RAA+    +PP   RDLL GT LR D   +G     +L ++ REL+  L   E +A+
Sbjct:  451 SGALSVREFKRAVESLGFVVADDEASYVVGYYGADSG----GEMRYATFVEDVARLGRHFMEHSD------VGAATARSGAGDRSGHPAIVRRFIKKLRAKLLTSIKKN----GEYERILIRRAFLNWDADASGQLDARELVGALAQLGVTLSESEASQIVAAYDASNQGAMRYQA--LVEDVC---EGVPHFIESAEDPDVETRANLKSTTAPTPEEEHE------DELLLESLFTCRPYEKTQNALAEEFKVKLRYAVEARILSQGGTVQSILREAFLFWDSDASGELNVREFMGAMNRVGMDMSEMHARQIVRYYDRKGNRGRFGDGEIHYMDLVDEIAKAVPHFISHPVPKRAAGPPPSARADGDVAVALPPSIAESKDRLRAAVLRAAPKTRAAKGGQPIPP---RDLLHGTLLRIDKAGSGAATAKDLARLARELRAPLNDRELQAV 875
[Close]
BLAST of mRNA_P-littoralis_Contig122.40.2 vs. uniprot
Match: A0A836CKG4_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKG4_9STRA)

HSP 1 Score: 145 bits (365), Expect = 9.460e-33
Identity = 133/484 (27.48%), Postives = 189/484 (39.05%), Query Frame = 2 
Query:    2 SGMLNTKHFIGALSQMGVPVTQQEAEEVMAHYSVEDADTVEAEIPIADLLNDAVKGAPGLLDDDQSVTGRLMGSSQSHRGVMETSETKKPVTTMIKAFRAKLRELIDKRVRHVGGSPGHILKSLLLNWDTERNGALDNKQLRGALRTFNMRLSATQAAEVSRHYAKNGNEALG-------CDS-----------------------------MQLVEDVCGYDQGPFVYQTWKEASDQMGRGSDSSSVATSGRENSHRNGDTSDRTQSSLHFTARPRKNLSNRLVDKFKLRLRDALEQTIKNKGGVSHAIIREAFLDWDTDASGKLNPRELVGALKRMGVRMTDDEANATVAYYDLDGTGEMSYELLCKEIEAMSHPMLSYIEEVDVLSGLDQVVREPVAVKKALESIRAGVAVAARRAAESPDTLPPILG-----RDLLEGTCLRFDTQDNGVLGVDELRQIWRELKISLRKSETKALVAWFD 1330
            SG +  +  +GA   +GVP+T+QEAEEV+  Y   D                                                        T+I AFRAKL++L+ +R+R  GGS   ILK+L L W+T R+ A     +RGALR   M L+ +QA EV  +Y      A         CD+                              +L+ D+   ++    + + +E       G           + +HR         + + FTARP +   NR V+KFKLRLRD LE  I+++GG+ HA                                                   EM Y LLC+EIE MSH +LSY+E+ DVL GLD  VREP    +    +R GV     RA           G     RDL  GTCLRFD    G++    LR++  EL ++L+ +E   +  W++
Sbjct:  105 SGAIAVEELLGACRSIGVPITRQEAEEVVYCYDARD--------------------------------------------------------TVIIAFRAKLKDLLARRIREQGGSEMGILKALFLKWNTSRSFATSADDVRGALRKLGMNLTRSQADEVVGYYTPRSAAAQARMCASAYCDNGXXXXXXXXXXXXXXXXXXXLDAASYFDFRELIHDIVKGERSILAFPSQEEMEAVQREGLV---------QETHRE------CLNDMAFTARPVRKPRNREVEKFKLRLRDRLELIIEHRGGIHHAR--------------------------------------------------EMDYTLLCREIEGMSHDILSYVEDCDVLRGLDHAVREPPLNAEVRAYVRGGV----ERAXXXXXXXXXXAGAAIAPRDLFLGTCLRFDAGSTGMVDGAGLRRVCSELGVALKLAEADKMCMWYE 463
[Close]
BLAST of mRNA_P-littoralis_Contig122.40.2 vs. uniprot
Match: A0A482SPZ1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPZ1_9ARCH)

HSP 1 Score: 130 bits (326), Expect = 8.790e-28
Identity = 113/470 (24.04%), Postives = 214/470 (45.53%), Query Frame = 2 
Query:    2 SGMLNTKHFIGALSQMGVPVTQQEAEEVMAHYSVEDADTVEAEIPIADLLNDAVKGAPGLL-------DDDQSVTGRLMGSSQSHRGVMETSETKKPVTTMIKAFRAKLRELIDKRVRHVGGSPGHILKSLLLNWDTERNGALDNKQLRGALRT-FNMRLSATQAAEVSRHYAKNGNEALGCDSMQLVEDVCGYDQGPFVYQTWKEASDQMGRGSDSSSVATSGRENSHRNGDTSDRTQSSLHFTARPRKNLSNRLVDKFKLRLRDALEQTIKNKGGVSHAIIREAFLDWDTDASGKLN-PRELVGALKRMGVRMTDDEANATVAYYDLDGTGEMSYELLCKEIEAMSHPMLSYIEEVDVLSGLDQVVREPVAVKKALESIRAGVAVAARRAAESPDTLPPILGRDLLEGTCLRFDTQDNGVLGVDELRQIWRELKISLRKSETKALVAWFDRSTANRLHYADLCDAIFG 1384
            SG ++       +  +GV VT  E  E++ +Y    A+    E+   +LL D  +G P ++       ++D+          Q      E S+    +  ++K F   +R  +   +R  GG+P   ++ +   +D + +  LD K+L  A R    + ++  QA ++  +Y + G   +  +  + +EDVC  D  P +  T                      E + R+ D ++R+     F  +  +   N++++KFK  + D L + I   GG   + IR+AF+ WD + +GK++ P  L GA KR+GV ++D++A+  +  YD+  TGEM Y  L +++       LS  ++  + S      R P  V+  +  I+  +    +++    D+      +DLL GT +RFD Q +G +    +R+ + EL++S  + +      WFD + ++   Y  L   ++G
Sbjct:  152 SGNIDANELQSCMKSLGVKVTLDECREIVNYYRP--AERPGEEMDYQELLQDIQRGEPSIIAFVSQKEEEDRD---------QKELRFEEVSDKFVQMPPIVKKFLEAVRNYLMVTMRKQGGTPYQHIRFMFTFYDFDYSNGLDPKELVAACRRRMKLVITEDQAKQIVEYYDRKGLGQIYYE--KFLEDVC-QDVKPILTFT----------------------ELTPRSVDAANRSLQMNPFIPKAFRPPPNKVLEKFKQEVTDTLAKRIHGTGGTFASWIRDAFVSWDRNGTGKISDPEHLKGAAKRLGVELSDEDAHILIRCYDVHNTGEMHYHQLMEDMMRQDTHFLSDPKQ-HLPSLATPTQRTPQGVQNTIRHIQQALEKFVKKSKGRIDS------KDLLHGTFMRFDPQRSGRVDQTGMRRAFDELRVSYTERDVVDTCRWFDTNGSDTCDYNTLTQQVYG 578
[Close]
BLAST of mRNA_P-littoralis_Contig122.40.2 vs. uniprot
Match: F0YQB4_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQB4_AURAN)

HSP 1 Score: 120 bits (301), Expect = 2.510e-25
Identity = 89/248 (35.89%), Postives = 128/248 (51.61%), Query Frame = 2 
Query:  737 NRLVDKFKLRLRDALEQTIKNKGGVSHAIIREAFLDWDTDASGKLNPRELVGALKRMGVRMTDDEANATVAYYDLDGT------GEMSYELLCKEIEA-----MSHPMLSYIE--EVDVLSGLDQVVREPVAVKKALESIRAGVAVAA--RRAAESPDTLPPILGRDLLEGTCLRFDTQDNGVLGVDELRQIWRELKISLRKSETKA--------------LVAWFDRSTANRLHYADLCDAIFGRSS 1393
            N L ++FK++LR A+E  I ++GG   +I+REAFL WD+DASG+LN RE +GA+ R+G+ M++  A   V YYD  G       GE+ Y  L  EI       +SHP+            +  D  V  P ++ ++ + +RA V  AA   RAA+    +PP   RDLL GT LR D   +G     +L ++ REL+  L   E +A              LV W+D S +N L YA L +  F R +
Sbjct:  169 NALAEEFKVKLRYAVEARILSQGGTVQSILREAFLFWDSDASGELNVREFMGAMNRVGMDMSEMHARQIVRYYDRKGNRGRFGDGEIHYMDLVDEIAKAVPHFISHPVPKRAAGPPPSARADGDVAVALPPSIAESKDRLRAAVLRAAPKTRAAKGGQPIPP---RDLLHGTLLRIDKAGSGAATAKDLARLARELRAPLNDRELQAVPKPTTGLGARLRELVTWYDVSGSNTLPYAALVEDCFPRGA 413
[Close]
BLAST of mRNA_P-littoralis_Contig122.40.2 vs. uniprot
Match: A0A7R9U8E9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8E9_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.040e-18
Identity = 62/212 (29.25%), Postives = 110/212 (51.89%), Query Frame = 2 
Query:  743 LVDKFKLRLRDALEQTIKNKGGVSHAIIREAFLDWDTDASGKLNPRELVGALKRMGVRMTDDEANATVAYYDLDGTGEMSYELLCKEIEAMSHPMLSYIEEVDVLSGLDQVVREPVAVKKALESIRAGVAVAARRAAESPDTLPPILGRDLLEGTCLRFDTQDNGVLGVDELRQIWRELKISLRKSETKALVAWFDRSTANRLHYADLCDAI 1378
            +V++   RLR AL + +K  GG   +I+R +FL WD DASG++NP ELV A + +GV +T  EA + + YYD +G GE+ Y  L +++   +   L +          D+V +         + IR   A+  ++      T   I+ +  L     ++D   NG+L  +ELR   R+  ++L + E   +VA++ +  ++ +HY +L + +
Sbjct:   16 VVERVMQRLRVALTKKMKKSGGTPLSILRASFLHWDADASGQMNPFELVKACRTLGVALTLQEARSLIEYYDEEGDGEIRYTDLTEDLRKTTPSFLVHAAGTTPRLPPDEVPKAKEMPPLVQDFIRRMKALLLKKMRRDGGTEFSIVRQIFL-----KWDADQNGMLCAEELRGAARDFTLTLSRKEADVVVAYYTKEGSDGMHYQELLEDL 222
[Close]
BLAST of mRNA_P-littoralis_Contig122.40.2 vs. uniprot
Match: A0A7S2BI80_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI80_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 3.030e-15
Identity = 93/368 (25.27%), Postives = 153/368 (41.58%), Query Frame = 2 
Query:  293 FRAKLRELIDKRVRHVGGSPGHILKSLLLNWDTERNGALDNKQLRGALRTFNMRLSATQAAEVSRHYAKNGNEALGCDSMQLVEDVCGYDQGPFVYQTWKEASDQMGRGSDSSSVATSGRENSHRNGDTSDRTQSSLHFTARPRKNLSNRLVDKFKLRLRDALEQTIKNKGGVSHAIIREAFLDWDTDASGKLNPRELVGALKRMGVRMTDDEANATVAYYDLDGTGEMSYELLCKEIEA-----MSHPMLSYIEEVDVLSGLDQVVREPVAVKKALESIRAGVAVAARRAAESPDTLPPILGRDL---LEGTCLR---------------FDTQDNGVLGVDELRQIWRELKISLRKSETKALVAWF 1327
            F  KL+  + +R++  GG+ G +L+   LNWD + +G L + +  GALR+    +S  +A  +  +Y   G+  +      LVEDV    +G   +    E         D S  A   R+N H  GD                       +  F  +LR  L + ++  G     ++R AFL+WD D+SG ++  EL GA+ ++G+ + + EA   V +YD+   GE  Y+ L  ++       M HP      E +  S LD    + +AV        AG    AR    S + L     R L   LE   +R               +D+  +G L V E +     + ++L  +E   +V ++
Sbjct:    2 FIQKLQRFLRRRMKESGGTEGSVLRQAFLNWDADCSGELSSTEFMGALRSLGCLISQREAQIIVDYYDLEGDGEMTYPP--LVEDVS---RGSRHFLQHPEKESARTSAPDHSDSARPHRKNPH--GDD---------------------FMSAFLQKLRKILMKHMRRYGENEKILVRRAFLNWDADSSGCISAAELKGAMNQLGMFINNTEAARIVDFYDVYKKGEFGYKTLVDDVSNGVPTFMEHP------ESEGKSHLDVPDEDDLAV--------AGRMFTARPTQRSDNALVERFKRSLTQCLEDKMIREGGTIASIMREAFLFWDSDSSGALDVAEFKGAINRVGLALSNAEASQVVRYY 327
[Close]
BLAST of mRNA_P-littoralis_Contig122.40.2 vs. uniprot
Match: A0A8J2WKT0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WKT0_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.800e-14
Identity = 70/249 (28.11%), Postives = 110/249 (44.18%), Query Frame = 2 
Query:  293 FRAKLRELIDKRVRHVGGSPGHILKSLLLNWDTERNGALDNKQLRGALRTFNMRLSATQAAEVSRHYAKNGNEALGCDSMQLVEDVCGYDQGPFVYQTWKEASDQMGRGSDSSSVATSGRENSHRNGDTSDRTQSSLHF---------TARPRKNLSNRLVDKFKLRLRDALEQTIKNKGGVSHAIIREAFLDWDTDASGKLNPRELVGALKRMGVRMTDDEANATVAYYDLDGTGEMSYELLCKEIEA 1012
            F  ++R ++DK+ R  GG+ G  L+   LNWD + +G +D+ + R A+R+  + +S   A+ +  +Y   G       S+Q  E           Y    E                             D   +S HF         +ARP       ++ +F  ++R  L + I  KG     ++R AFL+WD DASGKL+  E   A+ ++ + M++DEA   V  YD  G GEM Y+ L K+I A
Sbjct:   73 FVRRIRRVLDKKSREHGGTEGTYLRECFLNWDADCSGTIDSTEFRKAIRSLGLDISQADASYLVGYY---GGVESAYTSVQKNE---------MTYDLLIE-----------------------------DVVNASTHFLQPQPPIPKSARPDGPFPP-VLRRFIKKVRQKLFRHIAGKGENERYLVRNAFLNWDKDASGKLDYDEFRNAMWQLNLAMSEDEAVQIVDLYDSTGKGEMRYDQLVKDITA 279
[Close]
BLAST of mRNA_P-littoralis_Contig122.40.2 vs. uniprot
Match: F0YFF7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFF7_AURAN)

HSP 1 Score: 54.3 bits (129), Expect = 3.690e-5
Identity = 23/54 (42.59%), Postives = 39/54 (72.22%), Query Frame = 2 
Query:  824 IREAFLDWDTDASGKLNPRELVGALKRMGVRMTDDEANATVAYYDLDGTGEMSY 985
            +R+AFL++D + SGK+N RE   AL+R+G  ++ D+ +  V  +D+DG G++SY
Sbjct:   77 LRDAFLEFDDNDSGKINKREFRRALERLGFELSADDVDGLVDRFDVDGDGKVSY 130
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig122.40.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LLI2_ECTSI3.440e-23359.15EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S1TRY6_9STRA1.910e-4830.86Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0YH50_AURAN4.070e-3630.46Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A836CKG4_9STRA9.460e-3327.48EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A482SPZ1_9ARCH8.790e-2824.04Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
F0YQB4_AURAN2.510e-2535.89EF-hand domain-containing protein n=1 Tax=Aureococ... [more]
A0A7R9U8E9_9STRA4.040e-1829.25Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2BI80_9STRA3.030e-1525.27Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J2WKT0_9STRA2.800e-1428.11Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YFF7_AURAN3.690e-542.59Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig122contigP-littoralis_Contig122:146880..154984 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LLI2
Model size1965
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons11
Evalue6.92e-234
EggNOG OGs2BXPI@1|root,2SSFT@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-22_001070.1
Cds size1950
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig122.40.2prot_P-littoralis_Contig122.40.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig122 146887..154976 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789526.567296-UTR-P-littoralis_Contig122:146879..1468861680789526.567296-UTR-P-littoralis_Contig122:146879..146886Pylaiella littoralis U1_48UTRP-littoralis_Contig122 146880..146886 +
1680789526.688952-UTR-P-littoralis_Contig122:154976..1549841680789526.688952-UTR-P-littoralis_Contig122:154976..154984Pylaiella littoralis U1_48UTRP-littoralis_Contig122 154977..154984 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789526.5788374-CDS-P-littoralis_Contig122:146886..1469861680789526.5788374-CDS-P-littoralis_Contig122:146886..146986Pylaiella littoralis U1_48CDSP-littoralis_Contig122 146887..146986 +
1680789526.5892193-CDS-P-littoralis_Contig122:147502..1477081680789526.5892193-CDS-P-littoralis_Contig122:147502..147708Pylaiella littoralis U1_48CDSP-littoralis_Contig122 147503..147708 +
1680789526.6009843-CDS-P-littoralis_Contig122:148297..1483651680789526.6009843-CDS-P-littoralis_Contig122:148297..148365Pylaiella littoralis U1_48CDSP-littoralis_Contig122 148298..148365 +
1680789526.6091437-CDS-P-littoralis_Contig122:148740..1488451680789526.6091437-CDS-P-littoralis_Contig122:148740..148845Pylaiella littoralis U1_48CDSP-littoralis_Contig122 148741..148845 +
1680789526.6174018-CDS-P-littoralis_Contig122:149888..1499941680789526.6174018-CDS-P-littoralis_Contig122:149888..149994Pylaiella littoralis U1_48CDSP-littoralis_Contig122 149889..149994 +
1680789526.6273382-CDS-P-littoralis_Contig122:150801..1509501680789526.6273382-CDS-P-littoralis_Contig122:150801..150950Pylaiella littoralis U1_48CDSP-littoralis_Contig122 150802..150950 +
1680789526.6411667-CDS-P-littoralis_Contig122:151482..1516271680789526.6411667-CDS-P-littoralis_Contig122:151482..151627Pylaiella littoralis U1_48CDSP-littoralis_Contig122 151483..151627 +
1680789526.651638-CDS-P-littoralis_Contig122:152201..1523031680789526.651638-CDS-P-littoralis_Contig122:152201..152303Pylaiella littoralis U1_48CDSP-littoralis_Contig122 152202..152303 +
1680789526.6601615-CDS-P-littoralis_Contig122:153139..1532261680789526.6601615-CDS-P-littoralis_Contig122:153139..153226Pylaiella littoralis U1_48CDSP-littoralis_Contig122 153140..153226 +
1680789526.6712108-CDS-P-littoralis_Contig122:153560..1537491680789526.6712108-CDS-P-littoralis_Contig122:153560..153749Pylaiella littoralis U1_48CDSP-littoralis_Contig122 153561..153749 +
1680789526.6804621-CDS-P-littoralis_Contig122:154283..1549761680789526.6804621-CDS-P-littoralis_Contig122:154283..154976Pylaiella littoralis U1_48CDSP-littoralis_Contig122 154284..154976 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig122.40.2

>prot_P-littoralis_Contig122.40.2 ID=prot_P-littoralis_Contig122.40.2|Name=mRNA_P-littoralis_Contig122.40.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=650bp
MLNTKHFIGALSQMGVPVTQQEAEEVMAHYSVEDADTVEAEIPIADLLND
AVKGAPGLLDDDQSVTGRLMGSSQSHRGVMETSETKKPVTTMIKAFRAKL
RELIDKRVRHVGGSPGHILKSLLLNWDTERNGALDNKQLRGALRTFNMRL
SATQAAEVSRHYAKNGNEALGCDSMQLVEDVCGYDQGPFVYQTWKEASDQ
MGRGSDSSSVATSGRENSHRNGDTSDRTQSSLHFTARPRKNLSNRLVDKF
KLRLRDALEQTIKNKGGVSHAIIREAFLDWDTDASGKLNPRELVGALKRM
GVRMTDDEANATVAYYDLDGTGEMSYELLCKEIEAMSHPMLSYIEEVDVL
SGLDQVVREPVAVKKALESIRAGVAVAARRAAESPDTLPPILGRDLLEGT
CLRFDTQDNGVLGVDELRQIWRELKISLRKSETKALVAWFDRSTANRLHY
ADLCDAIFGRSSAGPDALYSSRKQEERRPLQQAPPRPHVLQAQRSAALAL
GESSSSSNSSVAYATPLRTSMQELKRLAAEKDDRLASKTAWNWQGHPPAA
GDRNPEFGEGYRKKSSEPGSGDPPGSGVAPVRFRGVLKASGEAIVAEKAR
IEKRLKEVQRERALLLREKKRVECWRDTTTGRGRTTSSTPDAPANKCGA*
back to top

mRNA from alignment at P-littoralis_Contig122:146880..154984+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig122.40.2 ID=mRNA_P-littoralis_Contig122.40.2|Name=mRNA_P-littoralis_Contig122.40.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8105bp|location=Sequence derived from alignment at P-littoralis_Contig122:146880..154984+ (Pylaiella littoralis U1_48)
CAGTGGAATGCTCAACACGAAACATTTTATTGGAGCGCTGTCGCAGATGG
GAGTTCCGGTCACCCAACAAGAGGCGGAGGAAGTTATGGCCCACTATTCC
GTCGAAGGTGTGCGCGGGGCGCGGGTAGTTTAATGGGTGAGGGGCACCCG
ACACGTTCTTTCAACGTCCGTTGGATATTCCGGGCCCGGACAGCAGCTAA
CTATTGGAGAATCAAAAACCGTTTTTTCCTTTTAGGGATAGCTCATGAGC
TGTGTACTCAGTCTGAGGGGCCCGCGTGAAAGCACAGCAGCTTATGAGCA
TGGGCGAAGCCAGTTAGTGAATGAACTCCGGATGGTAGCAATTTCAACTC
AACGGACACCACCACTCCACCACTACCAACACCAACACGAAACACCACCA
CCACCACCACCACCACCACCAAGAACAACAAGAACACCACCACCACTACC
AACAACAACAACAACGACAACGACAACGACAAAAACACCGTCATCACCAC
CGCCGCCAACACCAACAACGACAGCCAACAGCAACGATAACAACAAACCT
CCAAATAATTTAATTGTTAGTCACGTACAAGCCTTTTGTCCCATAAACCT
CCGTCATATCGTGTTTTGCCTAGATGCAGATACGGTCGAGGCGGAGATTC
CTATCGCAGATCTCCTGAACGACGCCGTGAAAGGGGCGCCGGGTCTGCTA
GACGACGACCAGTCGGTAACCGGGAGGCTCATGGGATCTTCTCAGAGTCA
TCGGGGCGTGATGGAAACCTCGGAAACAAAGAAACCTGTCACGACCATGA
TCAAGGCCTTTCGTGCCAAGCTTCGAGAGGTGCGGTCGTGTGATCTGGTG
TGCTGAAGGATATCATGTCCTCGTCTGGCGGCGCTGACTTTCGGTTTATC
GTACTGTACTAATTTTCTAATTTTCAATTAATGCAGTGAACTCATTGGTG
GGTTCTTCGCCGTCTGGTTGCCTGATCGTCTGATGGACATTTGCTGTGTT
CCACAAGTTGGGATGGTCGGGTGCGTGATAACGATGGAGGCCGTGATGTT
CGATACCGGGATGTTCGGGGTTTGAAATGAAAACTCCACCATTGAGGTGT
TGCTTCATCATCATGTGATATGAAAAAGAATCCGAAAAGTCCTGTTTACC
ACGCTGAGCGGTCTGACTTCGCCATGGGAATGCAATATGGCGTTTTTTAT
ATCAGCGGGTTCTTTTCGTCGTCGAACGGCCTGATATCCCTCGAGCAAAC
GAAATATCTGCTATGTGTTTTTTTTCCAAAACCCGCTCTTGCTCGTCTGG
TCTGCTCGTTTGTTGAACGGCGTGGCTACCATGGGAATAAAATGCTTCGT
ACGGCGTTTTTTGCTTCACGCGATCTCCCTTGTCTCGTACGTTCGTGTCA
TTCGGGTGGGGGTTCTAGCTGATCGACAAGAGGGTGCGGCACGTGGGAGG
CTCGCCGGGCCACATTCTCAAAAGCCTGCTTCTCAAGTGAGTGTTAACCC
CTCCCTCATTAGCACCAACTGCTTCTTAATGTGGCAAAACATTCAACAGC
CCGCAAGTGCTGGTGGTGACTCTATGAGGAATAGGGGCGGTCGTCCGTCT
CAAAAGGGATGCGGGGCCAGCGGTCAAAATGACTGAAGGCCAAAACCAAG
ATAGGAACGCCACCCCCGTCAGCACCCAATAGTATGTGCGGTAAATGTCT
AATTGTGTTTTTTGACGCGCACGTCAAGAGCGCAGAGTCGAATGTGAAGA
AGAAATGTAGAAACAGCGTCCCGGAAAAGCTTTCAAGTCTACGGCTGCAC
ACAAATCGTTAAATGTGTTGTACGTACGTATGGCATGTATGTTGTGTACT
CACGAAACCAGCTGGGACACCGAGCGCAACGGCGCCTTGGACAACAAGCA
GCTGCGTGGGGCTCTTCGAACTTTTAACATGAGACTCTCGGCCACCCAGG
CTGCGGAGGTGTCGAGGTGGGAAACAAGAGTGTCGCCAGGCAAGGTTCAG
CTAACAAACTTGTTCCATATGATACACGGGCGTGTTTCACACTAGTTGTT
GCATGCCCTGAGTATGGGCTCCATGCTCCGACCCCGGGAGTGTTGAGGAG
GTAGAAGAGCGCTCTATAGAACGAATAACAGCAAAGCCTTCTCCTAGCCG
CTCCCTCGCACCTTTCAATTTTATGCCTTCCTCTGAAAGTACGGCAAGTG
AGGGAAACCCTGAGCACGGTTTTTTGTTGGGGGGGTAGACAAGTCGGAGT
GAATCTCGCGTATTGTACCGATGACGCTGCTTCCTAATTCTTGTTGTGTT
TTTTTTACTCTAGCTTGGAAGTGTCCGAACTCTATATGCGTCCGACGTAA
TTTTGAGGTATTTTCGGAAAATGTTAAACCTTTCTTTGAGGTTACCAGGT
AGGTGATTTTTCGAACACATTTTCTTTAAGAACGACCACGGAATGCCTGC
TTTCGACCCCCACCCCTTTCGCCGACTTTCATTTTGCGTCTAGTTCGCTT
GCTCTCCAATATCGCCATTTCTTTTCATTGCTTCGTCAATTCACTGCAGG
GGGGAGGGCGGGGAGAGTAAGGGACTAGAACGAGAGGACGCAGGGGCTCA
CCGGTTTTTTGCGTTGTCTCTTGGAAATGTGGTGTAGTGTAGCATGCCGA
CCAACGGATGCAACGAATCTGCACGACTTACCCGTTATCGACAGCCTTGT
CACCAGGTTCGTGCAGATTATCGGCTCGCACTCTCCGGCCGATGTCAGCA
TCTGTTGTGTTTTTCAAGACGTTGCATTCACAGCCACGATTTGACTTCAC
CTGGGTGCTTCGGTGTATTGAGCGCCGGGGTCATCAGAAGCCACACCACA
GACCCCGTACTGAAGAAAGACTTGGCTCGTAAAACCTCCTCTCTTCATCA
CCACCCTGTCCTCCTGTGCTTCCGCCTCTCTCTCTCTTCCTCTCTCCCTC
CCTCCCTCTGCCTCTCGCTCTCTCTGGCGTCTACTTCCCTCCGAACTTTA
TCAAACAAGGCACTACGCAAAGAACGGCAATGAAGCCCTAGGGTGCGACT
CGATGCAGCTCGTGGAGGACGTCTGCGGGTATGACCAGGGCCCGTTCGTT
TATCAAACCTGGAAGGTGAAACACCCCCACCGCCCCCAATTCCCTTGATT
TGCAGCACAACGGTGACAAATTCCCAATCTTGTCCCACCACGAAAACCAA
CCGTCGATCCGAACCTTGTACAGGGCCCCTGCACCTTGTTTCTGAGCTAC
CTTCGTCATAAGCGAGCCAAAAACGCAAATGACACGTCCGTTCTACGCAG
GCAGCCCCAACGAGGTTTCGACCCCATTCTTGCTGCTTACCTATCTTGAC
ACCACACTGGACGATGTCAGATAACTTTCGAAAACCTCATCATCAGTGTC
AATACATGTTCTAGGGTTTTGAAGGCGTAACACAACTTGCGTTTGAGCGC
AAAATAATGTCAGGTCGGAAAGCACTTGATCGATTTCGTGCTCCACAGCC
TCTCGCCGGAATCCGAAACGGGAAGGTCGTTGTGGTTCCCTGCGCTTTTT
GTCCACCTCAAAGCCGTGAGCGGCACCAGCCGTTCACGCCGTAGCATCGT
GAACATCACACACCTGCGGCGAAATCATTTTCCTCCCCAACGAACCGCCG
CCATCGTACCCTCTTCGGCCTAAAGAAGGAGTTGGCGAACCAAACCCCGA
GGTCGCCTTTCTGTCATCCTCCTACCTTCATTTCTGGCGGAGCCCCCAGC
ACAGACTTCATCTACTGCTGTAGTTCAACATCCGTGCCCAGTCGCCGAAC
TAACGATCTTGCTCAAACAGTTTGACCGATCCGACCACGGTCAATCAACG
GGAATGTTTCAGAGCCTATCAAGCAAACTACTATTGAAGAAATAATTTTG
TCCGACTTCAAACAACAAACAGGAGGCGTCGGACCAAATGGGAAGAGGGA
GTGATTCTTCATCGGTCGCGACGAGCGGGAGGGAAAACAGTCACAGGAAC
GGCGACACATCGGACCGAACCCAGTCGAGCCTTCACTTCACGGCGCGGCC
ACGCAAAAATCTTTCGAATAGGTACCTATTACGATGTGTGCTGGGACTCG
AACTCCCAGAGGCTGGAACTTGCTCGGATAGAGGGACTGGCTCCCCTACA
CCATGTAATCAGCGCTAAATATGTGTCCTAAAAGAGCAGCCCCTGCAAAC
CGAATACACGGCTGTATTTGCGTAGATTATGGTGTGCACGTCGCTCCAAC
GTTTGATGCTGGCGTATGTTGGCGTGAATATTTGCACCTCCAAGGAATCG
AGCCATTCCGGCCAGGAGACGAAGCTTGCGTTGGTACGACTGATCACGGC
GGGACATCAGTCAGTTCCAAAATGAACTTCCCTAGAGCGGTACAGCCCTC
CAAACGTCTTCAACCTTGCATCCGGTGGGGTCCCCTCTTCATGACCGCAG
CAAAAAGCGTGAAACGGATGGCCTTCTAGGAATGTATGAAACAAACGGCT
GCCTGTAAAATACATTTGTCATGTAAATCGCAAATCGGTGAAGTCTTGCT
GAGAACGGGTATGATGTGGCTGGTTTTTCACTCCTCCAACTTGATGGACG
CAGGCTGGTTGACAAGTTCAAGTTGCGGTTGAGGGACGCTCTGGAACAAA
CCATTAAAAATAAGGGAGGGGTGAGTCATGCGATTATCCGCGAGGCCTTC
TTGGACTGGGACACTGATGCTTCGGGGAAGTTGAATCCCCGCGAGCTGGT
GAGTGATGGTGAAAACTGGCTTGTCGCTTGAGTTCTCGGGGGATTGGTGC
TACTGCTGCTGTAAGGGTGAGGAAAGAGGACAAGGTGCTACACAAAATCT
GTTTCTCGCGTGGATTTTGGTATTACGACGGGATTTCGTTTGTTGTGTTG
CCAAACTTTGCTTGGTACTTTAGAAATATGAAGCGCTCACCAACGGAAGC
CTCGTTTTTTTTGCCTCCCATGTGATTCGAACCCAAACCTCGCTTAGGGA
GTGGGGTGGTAAGTCAACGCAGATATAACGTAAACTCGCCGTAAGTGTAC
CTCTGTGATGTGGTGCTCACCTAGCCCGAGGAATATCGCTAACAGACGGA
AAGCATCCCGCGCAATGGTACGGTTTAGATCGTGCCTTCAGCGCTCGGCT
ACGATGCCGTAAGAAGGCGTGACGAACACAACTCGAAAAAATGTGCTTCC
GTGGATGCAGAATACTGCTGTCGTTGATTCGATGCTCCCGCTGCCGGATA
GATAACTATCAGCACGTGCGATACAACCCATAGCTGTGCTGATCTCGCAA
GTTTCGGGCGATCAAAACTCAGGTGGGGGCGCTGAAGCGGATGGGAGTGC
GCATGACCGACGATGAGGCGAACGCTACAGTTGCCTACTACGACCTGGAT
GGGACCGGGGAAATGAGCTACGAGGTATTACATTATCGTATCTTGTGTGA
AGGCTTCGCAACCGGTACATGAAGATCAGAGGTTTGGTGCGGTTTGGACA
GCATTTTGCTCTATTGTTGTTTGCCTTGTTCTCGGTGCTCGAGTAGTGTG
AAAATAAGCTGTTGGCAAACCTTGTTCTCGTTCCAAGCCTGCCGGGGAGG
ATTGCAGTTGACGCTTCGGTGTTGTCTGGACGACAAGCAAGGGTGAGAAT
GACGAAAGGCGGTGCAACGCAAAAAGAAAATCCCGAAGGGCAGGAGCCGA
GCCAATCACAGGAACAACTAGAATTGAGGAATGACTGGTACTGCCATCAA
TTTGCTCGTGTGTAGGCTATTTCTTTCAAGGAGGACGGCAAGCATATCGT
TTAGCAGGGCAGGGCTTCTTCTTCGAGAGAAAACAAGCACACGCCGAAAT
GACCGTCCTTTGGGCGGCGGTGGACGGGTGGCATCGCAACAATGGACTTG
GAGAGGACTCGGAGCAAAGGATAGAGCTGTGATTTTCAGCTATCCTGCTC
TGGCGGAGTCTTCCGCGTCCCGGCTGACGCTTCCAGTGTCAAACTCCTAT
ACACACGGGGTCGCACAGCAGACCTCCTTTTTCTAAAACCTCCACGTCGT
TCAGCAAACACGACTTCGGCTATCATGAGAATGATGCGTTCTTGCCGTGC
TTTTGCCCTCGGCATTCGTTTCATGTGGCCCAATGGCTACTGTAGCTTTT
GCTCGTAGCAGTTGACTCCAAAGTCGTACCGTCCCTTCCCGCTAAGCTCA
CTTTGTTTCTGTTGGACTCTACTTATTTCACAACCGTTCGCTTTGCCGAA
AAATCGACAGCTCTTGTGCAAGGAGATCGAAGCCATGTCGCACCCGATGC
TGTCGTACATCGAAGAGGTTGACGTGCTGAGCGGGCTAGATCAAGTGGTA
AGTGTGGTACATTTCGTCGGCGATCTTGTCCTTCCCCTCTTCGTGGAACT
ACTGTAGAGCGATTCATGCACCGTTCCTTCTGTGACGTAGGCAATTTTCC
AGGAACAACCCCCCTCAGCACGCGGGCTGCAATATTCTCAGCGGATACCT
CATACTGCCAACCCACACCACATTCTGTATCTTTTTTATTGATCGGCTTC
AGGGCACCAAATGTTTGCAGCGTCGTTGTGTACGAGTGAGCGCAAGCACC
CCATCACATATTTCTGTATCGCACAACCTTTGTGGCGACTCGTCGTCGGT
TAAAATTGGTCGTCATCGTCCCCTTCCACAGGTCCGAGAGCCTGTCGCTG
TCAAGAAGGCGCTGGAGAGCATCCGAGCGGGGGTGGCCGTCGCAGCTAGA
CGTGCGGCTGAGTCACCCGATACGCTACCGCCGATCTTGGGGCGGGACCT
TCTTGAGGGAACGTGTTTACGGTTTGATACCCAAGACAACGGTGTGCTCG
GGGTGGACGAGCTGCGGCAGGTAGGTGGTCGTATCATGTGCAGGTCCGCC
CGCTCGGAAGCCTCGATGCACTGAGGTCCTTGCAGTACAGTGCCGGCCCA
CTCATGAGAAACGCCTATTATTGTGAGCAAGGCTCGACACCTTATCTTGT
CTTCACCACTGTTGTTGTGCACAGGCGACTATTTACGAGTAGGTTTTAGT
ACTGCGTTGGTCGCTGAACCCAAGATCGTAGGCCGAATTCATTAGTTTTT
CAAAATTCTGAGTCTGGGTTTGTAACGAACTTATTTTGGACGAATACTTC
GTAATATGTGTGACGAGGGGGGCGGTTCAGTAGTACAATACACCAAACAA
AGTGGAGAAGCCCATCTGAAAAGCAGAAATTTTCGCCCGAACTCGCGTTT
GCATGTAATTTTGGGGTCCACATGGTACGATTTTCAAGCAGCACGACCGA
GTCTAAATTCTCAGAGCACCCCCGTTCTTTCAACGTCGAAAAACAAACGT
GTGGTGTGTCCCGCTTGTATCCGCCGTGTTTCGTGTGTCTTATTGATTCA
AAAGATCTGGCGGGAGCTTAAGATCAGCCTCCGAAAGTCCGAAACAAAGG
CGCTCGTGGCCTGGTTCGATCGGAGCACGGCCAACCGTCTGCACTACGCC
GACCTTTGCGACGCCATCTTTGGCCGTAGCAGCGCCGGACCCGACGCCTT
GTACTCGTCCCGGAAGCAAGAAGAACGACGACCGTTGCAACAGGCACCGC
CAAGGCCTCACGTGCTCCAAGCTCAACGCTCGGCAGCCTTGGCGCTAGGT
GAAAGCAGCAGCAGCAGCAATAGCAGCGTCGCTTACGCCACACCACTGCG
GACCAGTATGCAAGAGCTAAAACGTCTGGCAGCTGAGAAAGACGATCGAT
TGGCAAGCAAGACAGCTTGGAACTGGCAGGGCCACCCCCCTGCGGCAGGG
GATCGAAACCCGGAGTTCGGTGAAGGATATCGAAAGAAGAGCAGCGAGCC
CGGGAGTGGCGACCCGCCGGGTTCCGGGGTAGCCCCGGTACGTTTCAGGG
GGGTATTGAAGGCTAGTGGTGAGGCGATTGTGGCAGAGAAGGCGAGAATA
GAAAAGCGGCTAAAGGAGGTTCAGCGCGAGAGAGCGTTGCTGCTTCGCGA
AAAGAAGCGGGTCGAGTGCTGGAGGGATACGACGACGGGGAGGGGAAGAA
CCACATCTTCGACGCCTGACGCTCCCGCGAACAAGTGTGGGGCCTGACCT
GTGTG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig122:146880..154984+

>mRNA_P-littoralis_Contig122.40.2 ID=mRNA_P-littoralis_Contig122.40.2|Name=mRNA_P-littoralis_Contig122.40.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1950bp|location=Sequence derived from alignment at P-littoralis_Contig122:146880..154984+ (Pylaiella littoralis U1_48)
ATGCTCAACACGAAACATTTTATTGGAGCGCTGTCGCAGATGGGAGTTCC
GGTCACCCAACAAGAGGCGGAGGAAGTTATGGCCCACTATTCCGTCGAAG
ATGCAGATACGGTCGAGGCGGAGATTCCTATCGCAGATCTCCTGAACGAC
GCCGTGAAAGGGGCGCCGGGTCTGCTAGACGACGACCAGTCGGTAACCGG
GAGGCTCATGGGATCTTCTCAGAGTCATCGGGGCGTGATGGAAACCTCGG
AAACAAAGAAACCTGTCACGACCATGATCAAGGCCTTTCGTGCCAAGCTT
CGAGAGCTGATCGACAAGAGGGTGCGGCACGTGGGAGGCTCGCCGGGCCA
CATTCTCAAAAGCCTGCTTCTCAACTGGGACACCGAGCGCAACGGCGCCT
TGGACAACAAGCAGCTGCGTGGGGCTCTTCGAACTTTTAACATGAGACTC
TCGGCCACCCAGGCTGCGGAGGTGTCGAGGCACTACGCAAAGAACGGCAA
TGAAGCCCTAGGGTGCGACTCGATGCAGCTCGTGGAGGACGTCTGCGGGT
ATGACCAGGGCCCGTTCGTTTATCAAACCTGGAAGGAGGCGTCGGACCAA
ATGGGAAGAGGGAGTGATTCTTCATCGGTCGCGACGAGCGGGAGGGAAAA
CAGTCACAGGAACGGCGACACATCGGACCGAACCCAGTCGAGCCTTCACT
TCACGGCGCGGCCACGCAAAAATCTTTCGAATAGGCTGGTTGACAAGTTC
AAGTTGCGGTTGAGGGACGCTCTGGAACAAACCATTAAAAATAAGGGAGG
GGTGAGTCATGCGATTATCCGCGAGGCCTTCTTGGACTGGGACACTGATG
CTTCGGGGAAGTTGAATCCCCGCGAGCTGGTGGGGGCGCTGAAGCGGATG
GGAGTGCGCATGACCGACGATGAGGCGAACGCTACAGTTGCCTACTACGA
CCTGGATGGGACCGGGGAAATGAGCTACGAGCTCTTGTGCAAGGAGATCG
AAGCCATGTCGCACCCGATGCTGTCGTACATCGAAGAGGTTGACGTGCTG
AGCGGGCTAGATCAAGTGGTCCGAGAGCCTGTCGCTGTCAAGAAGGCGCT
GGAGAGCATCCGAGCGGGGGTGGCCGTCGCAGCTAGACGTGCGGCTGAGT
CACCCGATACGCTACCGCCGATCTTGGGGCGGGACCTTCTTGAGGGAACG
TGTTTACGGTTTGATACCCAAGACAACGGTGTGCTCGGGGTGGACGAGCT
GCGGCAGATCTGGCGGGAGCTTAAGATCAGCCTCCGAAAGTCCGAAACAA
AGGCGCTCGTGGCCTGGTTCGATCGGAGCACGGCCAACCGTCTGCACTAC
GCCGACCTTTGCGACGCCATCTTTGGCCGTAGCAGCGCCGGACCCGACGC
CTTGTACTCGTCCCGGAAGCAAGAAGAACGACGACCGTTGCAACAGGCAC
CGCCAAGGCCTCACGTGCTCCAAGCTCAACGCTCGGCAGCCTTGGCGCTA
GGTGAAAGCAGCAGCAGCAGCAATAGCAGCGTCGCTTACGCCACACCACT
GCGGACCAGTATGCAAGAGCTAAAACGTCTGGCAGCTGAGAAAGACGATC
GATTGGCAAGCAAGACAGCTTGGAACTGGCAGGGCCACCCCCCTGCGGCA
GGGGATCGAAACCCGGAGTTCGGTGAAGGATATCGAAAGAAGAGCAGCGA
GCCCGGGAGTGGCGACCCGCCGGGTTCCGGGGTAGCCCCGGTACGTTTCA
GGGGGGTATTGAAGGCTAGTGGTGAGGCGATTGTGGCAGAGAAGGCGAGA
ATAGAAAAGCGGCTAAAGGAGGTTCAGCGCGAGAGAGCGTTGCTGCTTCG
CGAAAAGAAGCGGGTCGAGTGCTGGAGGGATACGACGACGGGGAGGGGAA
GAACCACATCTTCGACGCCTGACGCTCCCGCGAACAAGTGTGGGGCCTGA
back to top